EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSFOG00015008578 (Gene tree)
Gene ID
108942509
Gene Symbol
rbms3
Alias
zgc:153698
Full Name
RNA binding motif single stranded interacting protein 3
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Plus strand
Length
166350 bases
Position
chrKV411246.1:706508-872857
Accession
108942509
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015013321RRM_1PF00076.223.6e-3212
ENSSFOP00015013321RRM_1PF00076.223.6e-3222
ENSSFOP00015013302RRM_1PF00076.224e-3212
ENSSFOP00015013302RRM_1PF00076.224e-3222
ENSSFOP00015013312RRM_1PF00076.224.7e-3212
ENSSFOP00015013312RRM_1PF00076.224.7e-3222
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015013478-2020XM_018765910ENSSFOP00015013312412 (aa)XP_018621426A0A1W5B872
ENSSFOT00015013487-1361-ENSSFOP00015013321378 (aa)--
ENSSFOT00015013467-1948-ENSSFOP00015013302388 (aa)--
Gene Model
Click here to download ENSSFOG00015008578's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015008578's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSFOG00015008578rbms35737.500ENSSFOG00015010874celf46637.500
ENSSFOG00015008578rbms37132.000ENSSFOG00015022130celf3a6235.000
ENSSFOG00015008578rbms39575.691ENSSFOG00015006642-9674.286
ENSSFOG00015008578rbms39969.359ENSSFOG00015022929rbms19371.059
ENSSFOG00015008578rbms35136.250ENSSFOG00015004376celf5a5536.250
ENSSFOG00015008578rbms39669.482ENSSFOG00015014493rbms1a9375.472
ENSSFOG00015008578rbms39572.376ENSSFOG00015015788rbms2a9969.029
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015008578rbms39987.081ENSG00000144642RBMS310089.773Homo_sapiens
ENSSFOG00015008578rbms310095.192ENSAPOG00000003432-10095.192Acanthochromis_polyacanthus
ENSSFOG00015008578rbms39681.299ENSAPOG00000007266rbms39382.078Acanthochromis_polyacanthus
ENSSFOG00015008578rbms37582.724ENSAMEG00000005947RBMS39982.724Ailuropoda_melanoleuca
ENSSFOG00015008578rbms39575.549ENSACIG00000021113RBMS39575.824Amphilophus_citrinellus
ENSSFOG00015008578rbms38095.513ENSACIG00000006987-8595.513Amphilophus_citrinellus
ENSSFOG00015008578rbms39983.019ENSAOCG00000021274rbms39983.019Amphiprion_ocellaris
ENSSFOG00015008578rbms39894.933ENSAOCG00000024104-10088.506Amphiprion_ocellaris
ENSSFOG00015008578rbms39281.667ENSAPEG00000016299rbms39481.667Amphiprion_percula
ENSSFOG00015008578rbms310088.164ENSAPEG00000009481-10088.406Amphiprion_percula
ENSSFOG00015008578rbms39983.175ENSATEG00000024295rbms39983.412Anabas_testudineus
ENSSFOG00015008578rbms310094.952ENSATEG00000008433-10094.952Anabas_testudineus
ENSSFOG00015008578rbms39985.814ENSAPLG00000012270RBMS39985.116Anas_platyrhynchos
ENSSFOG00015008578rbms39987.770ENSACAG00000028664RBMS39988.010Anolis_carolinensis
ENSSFOG00015008578rbms39984.455ENSANAG00000021899RBMS39984.687Aotus_nancymaae
ENSSFOG00015008578rbms39982.898ENSACLG00000018506rbms39983.135Astatotilapia_calliptera
ENSSFOG00015008578rbms39894.133ENSACLG00000008976-9486.333Astatotilapia_calliptera
ENSSFOG00015008578rbms39989.130ENSAMXG00000020388rbms39989.130Astyanax_mexicanus
ENSSFOG00015008578rbms36687.209ENSAMXG00000043770-10087.209Astyanax_mexicanus
ENSSFOG00015008578rbms39987.799ENSBTAG00000044062RBMS39988.038Bos_taurus
ENSSFOG00015008578rbms39984.455ENSCJAG00000004312RBMS39984.687Callithrix_jacchus
ENSSFOG00015008578rbms39983.871ENSCAFG00000005464RBMS39984.101Canis_familiaris
ENSSFOG00015008578rbms39983.871ENSCAFG00020024980RBMS39984.101Canis_lupus_dingo
ENSSFOG00015008578rbms39987.321ENSCHIG00000009144RBMS39987.560Capra_hircus
ENSSFOG00015008578rbms38384.451ENSTSYG00000002615RBMS39984.451Carlito_syrichta
ENSSFOG00015008578rbms39682.645ENSCAPG00000017783RBMS39782.275Cavia_aperea
ENSSFOG00015008578rbms39988.136ENSCPOG00000006457RBMS39988.136Cavia_porcellus
ENSSFOG00015008578rbms39984.455ENSCCAG00000008671RBMS39984.687Cebus_capucinus
ENSSFOG00015008578rbms310084.101ENSCATG00000013222RBMS310084.332Cercocebus_atys
ENSSFOG00015008578rbms39986.603ENSCLAG00000005866RBMS39986.842Chinchilla_lanigera
ENSSFOG00015008578rbms37086.194ENSCSAG00000009655RBMS39986.194Chlorocebus_sabaeus
ENSSFOG00015008578rbms38884.615ENSCHOG00000000758RBMS38084.615Choloepus_hoffmanni
ENSSFOG00015008578rbms39988.969ENSCPBG00000022678RBMS39988.969Chrysemys_picta_bellii
ENSSFOG00015008578rbms39984.223ENSCANG00000032137RBMS39984.455Colobus_angolensis_palliatus
ENSSFOG00015008578rbms39984.988ENSCGRG00001007243Rbms39985.472Cricetulus_griseus_chok1gshd
ENSSFOG00015008578rbms39984.988ENSCGRG00000004599Rbms39985.472Cricetulus_griseus_crigri
ENSSFOG00015008578rbms39983.215ENSCSEG00000010011RBMS39983.452Cynoglossus_semilaevis
ENSSFOG00015008578rbms310093.029ENSCSEG00000014677-9496.708Cynoglossus_semilaevis
ENSSFOG00015008578rbms310094.778ENSCVAG00000022814-10094.778Cyprinodon_variegatus
ENSSFOG00015008578rbms39983.732ENSCVAG00000022354rbms39983.732Cyprinodon_variegatus
ENSSFOG00015008578rbms39990.291ENSDARG00000044574rbms310097.222Danio_rerio
ENSSFOG00015008578rbms39986.603ENSDNOG00000016645RBMS39686.842Dasypus_novemcinctus
ENSSFOG00015008578rbms39986.364ENSDORG00000007220Rbms39986.603Dipodomys_ordii
ENSSFOG00015008578rbms38869.143ENSETEG00000009485-8069.143Echinops_telfairi
ENSSFOG00015008578rbms37254.212ENSEBUG00000005830rbms38954.212Eptatretus_burgeri
ENSSFOG00015008578rbms39987.081ENSEASG00005006152RBMS39987.321Equus_asinus_asinus
ENSSFOG00015008578rbms39987.081ENSECAG00000017871RBMS39987.321Equus_caballus
ENSSFOG00015008578rbms39678.426ENSEEUG00000014337RBMS310078.680Erinaceus_europaeus
ENSSFOG00015008578rbms310093.717ENSELUG00000006905-9897.119Esox_lucius
ENSSFOG00015008578rbms39685.340ENSELUG00000002862rbms39981.654Esox_lucius
ENSSFOG00015008578rbms39986.603ENSFCAG00000002130RBMS39986.842Felis_catus
ENSSFOG00015008578rbms39988.729ENSFALG00000009165RBMS39988.729Ficedula_albicollis
ENSSFOG00015008578rbms39986.364ENSFDAG00000008278RBMS39986.603Fukomys_damarensis
ENSSFOG00015008578rbms39576.438ENSFHEG00000004787RBMS39476.438Fundulus_heteroclitus
ENSSFOG00015008578rbms39885.894ENSGMOG00000002600-9786.634Gadus_morhua
ENSSFOG00015008578rbms39988.729ENSGALG00000011439RBMS39988.729Gallus_gallus
ENSSFOG00015008578rbms39983.532ENSGAFG00000000168rbms39983.532Gambusia_affinis
ENSSFOG00015008578rbms310094.724ENSGAFG00000003329-10094.724Gambusia_affinis
ENSSFOG00015008578rbms37088.476ENSGAGG00000004039RBMS39988.476Gopherus_agassizii
ENSSFOG00015008578rbms39984.455ENSGGOG00000007228RBMS39984.687Gorilla_gorilla
ENSSFOG00015008578rbms39894.133ENSHBUG00000019785-9690.300Haplochromis_burtoni
ENSSFOG00015008578rbms36786.842ENSHBUG00000021196rbms39386.842Haplochromis_burtoni
ENSSFOG00015008578rbms39986.842ENSHGLG00000002170RBMS39987.081Heterocephalus_glaber_female
ENSSFOG00015008578rbms39986.842ENSHGLG00100014278RBMS39987.081Heterocephalus_glaber_male
ENSSFOG00015008578rbms310092.806ENSHCOG00000007894-10092.806Hippocampus_comes
ENSSFOG00015008578rbms39988.889ENSIPUG00000017680rbms39988.889Ictalurus_punctatus
ENSSFOG00015008578rbms39987.081ENSSTOG00000006324RBMS39987.321Ictidomys_tridecemlineatus
ENSSFOG00015008578rbms39587.328ENSJJAG00000014708Rbms39983.732Jaculus_jaculus
ENSSFOG00015008578rbms39981.925ENSKMAG00000020500rbms39981.925Kryptolebias_marmoratus
ENSSFOG00015008578rbms310094.471ENSKMAG00000012586-10094.471Kryptolebias_marmoratus
ENSSFOG00015008578rbms36673.664ENSLBEG00000006677rbms39773.664Labrus_bergylta
ENSSFOG00015008578rbms310093.510ENSLBEG00000027388-10094.231Labrus_bergylta
ENSSFOG00015008578rbms39990.385ENSLACG00000010581RBMS39990.385Latimeria_chalumnae
ENSSFOG00015008578rbms37590.311ENSLOCG00000002328rbms39990.311Lepisosteus_oculatus
ENSSFOG00015008578rbms39983.641ENSLAFG00000000354RBMS39983.871Loxodonta_africana
ENSSFOG00015008578rbms39986.842ENSMFAG00000033300RBMS39987.081Macaca_fascicularis
ENSSFOG00015008578rbms39986.842ENSMMUG00000004404RBMS39987.081Macaca_mulatta
ENSSFOG00015008578rbms39984.223ENSMNEG00000035839RBMS39984.455Macaca_nemestrina
ENSSFOG00015008578rbms310084.101ENSMLEG00000029464RBMS310084.332Mandrillus_leucophaeus
ENSSFOG00015008578rbms39983.452ENSMAMG00000024043rbms39984.397Mastacembelus_armatus
ENSSFOG00015008578rbms39894.400ENSMAMG00000002176-8894.643Mastacembelus_armatus
ENSSFOG00015008578rbms39982.898ENSMZEG00005006308rbms39983.135Maylandia_zebra
ENSSFOG00015008578rbms39894.133ENSMZEG00005026469-9691.803Maylandia_zebra
ENSSFOG00015008578rbms39984.988ENSMAUG00000016436Rbms39985.472Mesocricetus_auratus
ENSSFOG00015008578rbms39984.455ENSMICG00000049249RBMS39984.687Microcebus_murinus
ENSSFOG00015008578rbms39983.051ENSMOCG00000006997Rbms39984.746Microtus_ochrogaster
ENSSFOG00015008578rbms38983.954ENSMMOG00000008471RBMS39584.241Mola_mola
ENSSFOG00015008578rbms310094.444ENSMMOG00000015071-10094.444Mola_mola
ENSSFOG00015008578rbms39683.590ENSMODG00000015125RBMS39979.505Monodelphis_domestica
ENSSFOG00015008578rbms310094.471ENSMALG00000009155-10094.471Monopterus_albus
ENSSFOG00015008578rbms39982.979ENSMALG00000019536RBMS39981.043Monopterus_albus
ENSSFOG00015008578rbms39984.262MGP_CAROLIEiJ_G0032783Rbms310090.338Mus_caroli
ENSSFOG00015008578rbms39984.988ENSMUSG00000039607Rbms310091.787Mus_musculus
ENSSFOG00015008578rbms39984.783MGP_PahariEiJ_G0015650Rbms310091.787Mus_pahari
ENSSFOG00015008578rbms39984.988MGP_SPRETEiJ_G0033930Rbms310091.787Mus_spretus
ENSSFOG00015008578rbms39984.101ENSMPUG00000011956RBMS39984.332Mustela_putorius_furo
ENSSFOG00015008578rbms39986.842ENSMLUG00000000659RBMS39987.081Myotis_lucifugus
ENSSFOG00015008578rbms39986.925ENSNGAG00000014039Rbms39986.925Nannospalax_galili
ENSSFOG00015008578rbms310094.471ENSNBRG00000018065-10094.471Neolamprologus_brichardi
ENSSFOG00015008578rbms39984.455ENSNLEG00000004129RBMS39984.687Nomascus_leucogenys
ENSSFOG00015008578rbms39977.471ENSMEUG00000004772RBMS39978.391Notamacropus_eugenii
ENSSFOG00015008578rbms39983.410ENSOPRG00000006808RBMS38583.641Ochotona_princeps
ENSSFOG00015008578rbms39987.081ENSODEG00000003651RBMS39987.321Octodon_degus
ENSSFOG00015008578rbms39585.165ENSONIG00000007172rbms39978.043Oreochromis_niloticus
ENSSFOG00015008578rbms39985.714ENSOANG00000010529RBMS39985.945Ornithorhynchus_anatinus
ENSSFOG00015008578rbms39983.180ENSOCUG00000004840RBMS39983.410Oryctolagus_cuniculus
ENSSFOG00015008578rbms310094.231ENSORLG00000002306-10094.231Oryzias_latipes
ENSSFOG00015008578rbms39982.057ENSORLG00000005370RBMS39982.057Oryzias_latipes
ENSSFOG00015008578rbms39981.818ENSORLG00020022674RBMS39981.818Oryzias_latipes_hni
ENSSFOG00015008578rbms310094.471ENSORLG00020008496-10094.471Oryzias_latipes_hni
ENSSFOG00015008578rbms310094.471ENSORLG00015015719-10094.471Oryzias_latipes_hsok
ENSSFOG00015008578rbms39982.297ENSORLG00015005509rbms39982.297Oryzias_latipes_hsok
ENSSFOG00015008578rbms310094.503ENSOMEG00000007677-10094.503Oryzias_melastigma
ENSSFOG00015008578rbms39982.775ENSOMEG00000014805RBMS39982.775Oryzias_melastigma
ENSSFOG00015008578rbms39983.641ENSOARG00000014684RBMS39983.871Ovis_aries
ENSSFOG00015008578rbms39984.455ENSPPAG00000036519RBMS39984.687Pan_paniscus
ENSSFOG00015008578rbms39983.759ENSPPRG00000002761RBMS39983.991Panthera_pardus
ENSSFOG00015008578rbms39986.364ENSPTIG00000011568RBMS39986.603Panthera_tigris_altaica
ENSSFOG00015008578rbms39987.081ENSPTRG00000014709RBMS39987.321Pan_troglodytes
ENSSFOG00015008578rbms310084.101ENSPANG00000010234RBMS310084.332Papio_anubis
ENSSFOG00015008578rbms36693.798ENSPKIG00000007989-10093.798Paramormyrops_kingsleyae
ENSSFOG00015008578rbms35493.750ENSPKIG00000016025-8681.028Paramormyrops_kingsleyae
ENSSFOG00015008578rbms39988.489ENSPSIG00000005269RBMS39988.489Pelodiscus_sinensis
ENSSFOG00015008578rbms310093.963ENSPMGG00000021683-10093.963Periophthalmus_magnuspinnatus
ENSSFOG00015008578rbms38983.862ENSPMGG00000021544rbms39183.862Periophthalmus_magnuspinnatus
ENSSFOG00015008578rbms39982.039ENSPEMG00000001117Rbms39982.524Peromyscus_maniculatus_bairdii
ENSSFOG00015008578rbms39187.293ENSPCIG00000006106RBMS38989.252Phascolarctos_cinereus
ENSSFOG00015008578rbms39984.010ENSPFOG00000017887rbms39984.010Poecilia_formosa
ENSSFOG00015008578rbms38383.281ENSPLAG00000016866-8283.281Poecilia_latipinna
ENSSFOG00015008578rbms310094.724ENSPMEG00000002993-10094.724Poecilia_mexicana
ENSSFOG00015008578rbms310082.143ENSPREG00000011880rbms310082.143Poecilia_reticulata
ENSSFOG00015008578rbms39894.681ENSPREG00000018221-9794.048Poecilia_reticulata
ENSSFOG00015008578rbms39970.968ENSPPYG00000014050RBMS38271.198Pongo_abelii
ENSSFOG00015008578rbms39964.516ENSPCAG00000006307RBMS39964.747Procavia_capensis
ENSSFOG00015008578rbms39984.687ENSPCOG00000017136RBMS39984.919Propithecus_coquereli
ENSSFOG00015008578rbms39084.444ENSPVAG00000014037RBMS38284.444Pteropus_vampyrus
ENSSFOG00015008578rbms310094.471ENSPNYG00000012624-10094.471Pundamilia_nyererei
ENSSFOG00015008578rbms39982.660ENSPNYG00000010546rbms39982.898Pundamilia_nyererei
ENSSFOG00015008578rbms39989.372ENSPNAG00000001800rbms39989.372Pygocentrus_nattereri
ENSSFOG00015008578rbms39985.230ENSRNOG00000025881Rbms39985.714Rattus_norvegicus
ENSSFOG00015008578rbms39983.991ENSRBIG00000035863RBMS39984.223Rhinopithecus_bieti
ENSSFOG00015008578rbms39685.676ENSRROG00000027512RBMS39784.383Rhinopithecus_roxellana
ENSSFOG00015008578rbms39984.455ENSSBOG00000020232RBMS39984.687Saimiri_boliviensis_boliviensis
ENSSFOG00015008578rbms39682.645ENSSHAG00000002411RBMS39982.031Sarcophilus_harrisii
ENSSFOG00015008578rbms39583.791ENSSMAG00000004997rbms39984.066Scophthalmus_maximus
ENSSFOG00015008578rbms39694.667ENSSMAG00000020065-9394.920Scophthalmus_maximus
ENSSFOG00015008578rbms310095.192ENSSDUG00000019287-10095.192Seriola_dumerili
ENSSFOG00015008578rbms39983.452ENSSDUG00000013656RBMS39983.688Seriola_dumerili
ENSSFOG00015008578rbms310095.192ENSSLDG00000013224-10095.192Seriola_lalandi_dorsalis
ENSSFOG00015008578rbms39983.099ENSSLDG00000020276RBMS39983.333Seriola_lalandi_dorsalis
ENSSFOG00015008578rbms38574.412ENSSARG00000000695RBMS39873.611Sorex_araneus
ENSSFOG00015008578rbms37983.607ENSSPUG00000017197RBMS39785.763Sphenodon_punctatus
ENSSFOG00015008578rbms39982.547ENSSPAG00000020693rbms39983.019Stegastes_partitus
ENSSFOG00015008578rbms39894.933ENSSPAG00000003983-10086.897Stegastes_partitus
ENSSFOG00015008578rbms39986.603ENSSSCG00000036381RBMS39986.842Sus_scrofa
ENSSFOG00015008578rbms38385.196ENSTGUG00000003572RBMS39985.196Taeniopygia_guttata
ENSSFOG00015008578rbms39982.033ENSTRUG00000021719RBMS39982.033Takifugu_rubripes
ENSSFOG00015008578rbms310082.423ENSTRUG00000007482-10082.339Takifugu_rubripes
ENSSFOG00015008578rbms38587.647ENSTBEG00000005362RBMS39886.111Tupaia_belangeri
ENSSFOG00015008578rbms39983.180ENSTTRG00000006202RBMS39983.410Tursiops_truncatus
ENSSFOG00015008578rbms39983.871ENSUMAG00000000263RBMS39984.101Ursus_maritimus
ENSSFOG00015008578rbms39575.926ENSVPAG00000003842RBMS39774.937Vicugna_pacos
ENSSFOG00015008578rbms39585.752ENSVVUG00000004660RBMS39990.870Vulpes_vulpes
ENSSFOG00015008578rbms37681.311ENSXETG00000032055RBMS39881.311Xenopus_tropicalis
ENSSFOG00015008578rbms310079.692ENSXCOG00000019600-10079.692Xiphophorus_couchianus
ENSSFOG00015008578rbms310094.964ENSXMAG00000014382-10094.964Xiphophorus_maculatus
ENSSFOG00015008578rbms39981.667ENSXMAG00000021783rbms39981.667Xiphophorus_maculatus

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