EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015008836 (Gene tree)
Gene ID: 108939454
Gene Symbol: zranb1
Alias: TRABID
Full Name: zinc finger RANBP2-type containing 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 15352 bases
Position: chrKV411190.1:601089-616440
Accession: 108939454
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015013718	zf-RanBP	PF00641.18	1.6e-06	1	2
ENSSFOP00015013718	zf-RanBP	PF00641.18	1.6e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015013886	-	4948	XM_018760812	ENSSFOP00015013718	711 (aa)	XP_018616328	A0A1W5AKW9

Gene Model

Click here to download ENSSFOG00015008836's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015008836's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015008836	zranb1	99	84.062	ENSSFOG00015009991	ZRANB1	91	83.876

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015008836	zranb1	98	89.459	ENSG00000019995	ZRANB1	98	89.031	Homo_sapiens
ENSSFOG00015008836	zranb1	99	86.827	ENSAPOG00000005337	zranb1a	99	86.629	Acanthochromis_polyacanthus
ENSSFOG00015008836	zranb1	98	84.290	ENSAPOG00000001420	ZRANB1	99	84.290	Acanthochromis_polyacanthus
ENSSFOG00015008836	zranb1	98	89.174	ENSAMEG00000004155	ZRANB1	98	88.746	Ailuropoda_melanoleuca
ENSSFOG00015008836	zranb1	99	80.297	ENSACIG00000005436	zranb1b	98	80.379	Amphilophus_citrinellus
ENSSFOG00015008836	zranb1	99	87.394	ENSAOCG00000001834	zranb1a	99	87.198	Amphiprion_ocellaris
ENSSFOG00015008836	zranb1	98	83.659	ENSAOCG00000004465	zranb1b	98	83.659	Amphiprion_ocellaris
ENSSFOG00015008836	zranb1	98	86.592	ENSAPEG00000007138	zranb1b	98	86.592	Amphiprion_percula
ENSSFOG00015008836	zranb1	98	86.344	ENSATEG00000001032	zranb1a	99	86.202	Anabas_testudineus
ENSSFOG00015008836	zranb1	98	86.555	ENSATEG00000007705	zranb1b	98	86.555	Anabas_testudineus
ENSSFOG00015008836	zranb1	98	89.362	ENSAPLG00000014747	ZRANB1	98	88.936	Anas_platyrhynchos
ENSSFOG00015008836	zranb1	98	88.604	ENSACAG00000014485	ZRANB1	98	88.177	Anolis_carolinensis
ENSSFOG00015008836	zranb1	98	89.031	ENSANAG00000028845	ZRANB1	97	88.588	Aotus_nancymaae
ENSSFOG00015008836	zranb1	99	85.534	ENSACLG00000017385	ZRANB1	98	85.493	Astatotilapia_calliptera
ENSSFOG00015008836	zranb1	99	85.977	ENSACLG00000003903	zranb1a	99	85.775	Astatotilapia_calliptera
ENSSFOG00015008836	zranb1	99	79.750	ENSAMXG00000008009	zranb1b	98	79.416	Astyanax_mexicanus
ENSSFOG00015008836	zranb1	98	89.316	ENSBTAG00000003395	ZRANB1	98	88.889	Bos_taurus
ENSSFOG00015008836	zranb1	98	89.459	ENSCJAG00000012573	ZRANB1	95	89.031	Callithrix_jacchus
ENSSFOG00015008836	zranb1	99	89.205	ENSCAFG00000012768	ZRANB1	95	88.746	Canis_familiaris
ENSSFOG00015008836	zranb1	99	89.205	ENSCAFG00020015397	ZRANB1	95	88.746	Canis_lupus_dingo
ENSSFOG00015008836	zranb1	98	89.316	ENSCHIG00000023041	ZRANB1	95	88.889	Capra_hircus
ENSSFOG00015008836	zranb1	98	89.031	ENSTSYG00000000123	ZRANB1	98	88.604	Carlito_syrichta
ENSSFOG00015008836	zranb1	98	89.174	ENSCPOG00000008391	ZRANB1	98	88.889	Cavia_porcellus
ENSSFOG00015008836	zranb1	73	86.180	ENSCCAG00000022748	ZRANB1	99	85.605	Cebus_capucinus
ENSSFOG00015008836	zranb1	98	89.459	ENSCATG00000035796	ZRANB1	98	89.031	Cercocebus_atys
ENSSFOG00015008836	zranb1	98	89.174	ENSCLAG00000003775	ZRANB1	98	88.746	Chinchilla_lanigera
ENSSFOG00015008836	zranb1	98	89.459	ENSCSAG00000004507	ZRANB1	95	89.031	Chlorocebus_sabaeus
ENSSFOG00015008836	zranb1	98	89.174	ENSCPBG00000028065	ZRANB1	98	88.746	Chrysemys_picta_bellii
ENSSFOG00015008836	zranb1	99	42.627	ENSCING00000013158	-	98	43.228	Ciona_intestinalis
ENSSFOG00015008836	zranb1	98	89.459	ENSCANG00000041458	ZRANB1	97	89.016	Colobus_angolensis_palliatus
ENSSFOG00015008836	zranb1	99	89.347	ENSCGRG00001024189	Zranb1	95	88.889	Cricetulus_griseus_chok1gshd
ENSSFOG00015008836	zranb1	99	89.347	ENSCGRG00000005680	Zranb1	95	88.889	Cricetulus_griseus_crigri
ENSSFOG00015008836	zranb1	99	86.645	ENSCSEG00000015297	ZRANB1	98	85.298	Cynoglossus_semilaevis
ENSSFOG00015008836	zranb1	99	83.784	ENSCSEG00000010830	zranb1a	99	83.738	Cynoglossus_semilaevis
ENSSFOG00015008836	zranb1	98	85.835	ENSCVAG00000019593	zranb1b	98	85.835	Cyprinodon_variegatus
ENSSFOG00015008836	zranb1	98	80.030	ENSDARG00000060257	zranb1a	97	80.568	Danio_rerio
ENSSFOG00015008836	zranb1	99	80.360	ENSDARG00000063190	zranb1b	98	80.305	Danio_rerio
ENSSFOG00015008836	zranb1	99	88.068	ENSDNOG00000044807	ZRANB1	95	87.607	Dasypus_novemcinctus
ENSSFOG00015008836	zranb1	98	88.889	ENSDORG00000010679	Zranb1	98	88.462	Dipodomys_ordii
ENSSFOG00015008836	zranb1	99	48.955	FBgn0037734	trbd	81	50.817	Drosophila_melanogaster
ENSSFOG00015008836	zranb1	98	88.034	ENSETEG00000018124	ZRANB1	98	87.607	Echinops_telfairi
ENSSFOG00015008836	zranb1	98	64.714	ENSEBUG00000003475	zranb1b	99	64.714	Eptatretus_burgeri
ENSSFOG00015008836	zranb1	98	89.459	ENSEASG00005013996	ZRANB1	98	89.031	Equus_asinus_asinus
ENSSFOG00015008836	zranb1	98	89.316	ENSECAG00000017587	ZRANB1	95	88.889	Equus_caballus
ENSSFOG00015008836	zranb1	99	81.283	ENSELUG00000015155	ZRANB1	98	80.965	Esox_lucius
ENSSFOG00015008836	zranb1	98	88.746	ENSFCAG00000002438	ZRANB1	98	88.319	Felis_catus
ENSSFOG00015008836	zranb1	98	89.886	ENSFALG00000004837	ZRANB1	98	89.459	Ficedula_albicollis
ENSSFOG00015008836	zranb1	98	89.031	ENSFDAG00000006136	ZRANB1	98	88.604	Fukomys_damarensis
ENSSFOG00015008836	zranb1	98	74.298	ENSFHEG00000011656	ZRANB1	99	74.262	Fundulus_heteroclitus
ENSSFOG00015008836	zranb1	98	83.424	ENSFHEG00000021079	zranb1b	99	83.832	Fundulus_heteroclitus
ENSSFOG00015008836	zranb1	98	85.048	ENSGMOG00000018270	zranb1b	98	85.048	Gadus_morhua
ENSSFOG00015008836	zranb1	98	89.886	ENSGALG00000031474	ZRANB1	98	89.459	Gallus_gallus
ENSSFOG00015008836	zranb1	98	84.615	ENSGAFG00000011850	zranb1b	99	84.615	Gambusia_affinis
ENSSFOG00015008836	zranb1	99	84.798	ENSGACG00000002597	ZRANB1	98	85.411	Gasterosteus_aculeatus
ENSSFOG00015008836	zranb1	99	84.247	ENSGACG00000009658	zranb1b	99	84.478	Gasterosteus_aculeatus
ENSSFOG00015008836	zranb1	98	89.031	ENSGAGG00000024980	ZRANB1	98	88.746	Gopherus_agassizii
ENSSFOG00015008836	zranb1	98	89.459	ENSGGOG00000016848	ZRANB1	95	89.031	Gorilla_gorilla
ENSSFOG00015008836	zranb1	99	86.261	ENSHBUG00000019365	zranb1a	99	86.060	Haplochromis_burtoni
ENSSFOG00015008836	zranb1	99	85.674	ENSHBUG00000017048	ZRANB1	98	85.634	Haplochromis_burtoni
ENSSFOG00015008836	zranb1	98	89.316	ENSHGLG00000013127	ZRANB1	98	88.889	Heterocephalus_glaber_female
ENSSFOG00015008836	zranb1	98	86.895	ENSHGLG00100007253	ZRANB1	98	86.467	Heterocephalus_glaber_male
ENSSFOG00015008836	zranb1	98	81.857	ENSHCOG00000016378	zranb1a	99	81.857	Hippocampus_comes
ENSSFOG00015008836	zranb1	98	84.040	ENSHCOG00000016466	ZRANB1	98	84.040	Hippocampus_comes
ENSSFOG00015008836	zranb1	99	78.860	ENSIPUG00000000984	zranb1b	98	78.801	Ictalurus_punctatus
ENSSFOG00015008836	zranb1	98	89.331	ENSSTOG00000014180	ZRANB1	98	89.047	Ictidomys_tridecemlineatus
ENSSFOG00015008836	zranb1	98	88.889	ENSJJAG00000009904	Zranb1	98	88.462	Jaculus_jaculus
ENSSFOG00015008836	zranb1	99	84.801	ENSKMAG00000013496	ZRANB1	99	84.473	Kryptolebias_marmoratus
ENSSFOG00015008836	zranb1	98	85.997	ENSKMAG00000020697	zranb1b	99	85.997	Kryptolebias_marmoratus
ENSSFOG00015008836	zranb1	99	83.853	ENSLBEG00000025466	zranb1a	99	83.642	Labrus_bergylta
ENSSFOG00015008836	zranb1	98	85.139	ENSLBEG00000022522	zranb1b	98	85.139	Labrus_bergylta
ENSSFOG00015008836	zranb1	98	89.744	ENSLACG00000012712	ZRANB1	98	89.316	Latimeria_chalumnae
ENSSFOG00015008836	zranb1	98	92.143	ENSLOCG00000007990	zranb1b	97	91.714	Lepisosteus_oculatus
ENSSFOG00015008836	zranb1	98	89.031	ENSLAFG00000015221	ZRANB1	98	88.604	Loxodonta_africana
ENSSFOG00015008836	zranb1	100	88.219	ENSMFAG00000031080	ZRANB1	97	89.016	Macaca_fascicularis
ENSSFOG00015008836	zranb1	98	89.383	ENSMMUG00000022028	ZRANB1	99	88.953	Macaca_mulatta
ENSSFOG00015008836	zranb1	100	88.219	ENSMNEG00000030081	ZRANB1	97	89.016	Macaca_nemestrina
ENSSFOG00015008836	zranb1	100	88.079	ENSMLEG00000039002	ZRANB1	97	88.873	Mandrillus_leucophaeus
ENSSFOG00015008836	zranb1	98	86.453	ENSMAMG00000017186	zranb1b	98	86.453	Mastacembelus_armatus
ENSSFOG00015008836	zranb1	99	85.674	ENSMZEG00005027460	ZRANB1	98	85.634	Maylandia_zebra
ENSSFOG00015008836	zranb1	99	86.119	ENSMZEG00005001639	zranb1a	99	85.917	Maylandia_zebra
ENSSFOG00015008836	zranb1	99	82.386	ENSMAUG00000004316	Zranb1	98	81.909	Mesocricetus_auratus
ENSSFOG00015008836	zranb1	98	89.459	ENSMICG00000000273	ZRANB1	98	89.031	Microcebus_murinus
ENSSFOG00015008836	zranb1	99	88.920	ENSMOCG00000013623	Zranb1	98	88.462	Microtus_ochrogaster
ENSSFOG00015008836	zranb1	99	86.544	ENSMMOG00000013723	zranb1a	99	86.344	Mola_mola
ENSSFOG00015008836	zranb1	98	83.795	ENSMMOG00000008203	zranb1b	99	83.817	Mola_mola
ENSSFOG00015008836	zranb1	99	89.078	ENSMODG00000010224	ZRANB1	94	88.620	Monodelphis_domestica
ENSSFOG00015008836	zranb1	99	85.376	ENSMALG00000018259	zranb1b	98	85.335	Monopterus_albus
ENSSFOG00015008836	zranb1	98	89.031	MGP_CAROLIEiJ_G0030583	Zranb1	95	88.604	Mus_caroli
ENSSFOG00015008836	zranb1	98	89.031	ENSMUSG00000030967	Zranb1	98	88.604	Mus_musculus
ENSSFOG00015008836	zranb1	98	89.031	MGP_PahariEiJ_G0013790	Zranb1	98	88.604	Mus_pahari
ENSSFOG00015008836	zranb1	98	89.031	MGP_SPRETEiJ_G0031697	Zranb1	95	88.604	Mus_spretus
ENSSFOG00015008836	zranb1	98	89.316	ENSMPUG00000002701	ZRANB1	95	88.889	Mustela_putorius_furo
ENSSFOG00015008836	zranb1	98	87.892	ENSMLUG00000000711	ZRANB1	98	87.464	Myotis_lucifugus
ENSSFOG00015008836	zranb1	99	89.062	ENSNGAG00000023760	Zranb1	98	88.604	Nannospalax_galili
ENSSFOG00015008836	zranb1	99	86.261	ENSNBRG00000013030	zranb1a	96	86.060	Neolamprologus_brichardi
ENSSFOG00015008836	zranb1	90	84.275	ENSNBRG00000016218	ZRANB1	96	84.451	Neolamprologus_brichardi
ENSSFOG00015008836	zranb1	98	89.316	ENSNLEG00000000584	ZRANB1	99	88.809	Nomascus_leucogenys
ENSSFOG00015008836	zranb1	99	88.920	ENSMEUG00000004252	ZRANB1	98	88.462	Notamacropus_eugenii
ENSSFOG00015008836	zranb1	99	81.392	ENSOPRG00000015594	-	98	80.912	Ochotona_princeps
ENSSFOG00015008836	zranb1	99	89.205	ENSODEG00000017463	ZRANB1	98	88.746	Octodon_degus
ENSSFOG00015008836	zranb1	99	86.261	ENSONIG00000016016	zranb1a	97	86.060	Oreochromis_niloticus
ENSSFOG00015008836	zranb1	98	85.554	ENSONIG00000000515	ZRANB1	98	85.554	Oreochromis_niloticus
ENSSFOG00015008836	zranb1	99	85.028	ENSOCUG00000007071	ZRANB1	92	84.561	Oryctolagus_cuniculus
ENSSFOG00015008836	zranb1	98	85.429	ENSORLG00000009697	zranb1a	98	85.143	Oryzias_latipes
ENSSFOG00015008836	zranb1	98	83.333	ENSORLG00000005663	zranb1b	99	83.470	Oryzias_latipes
ENSSFOG00015008836	zranb1	98	85.429	ENSORLG00020005936	ZRANB1	98	85.143	Oryzias_latipes_hni
ENSSFOG00015008836	zranb1	98	83.470	ENSORLG00020009424	zranb1b	99	83.607	Oryzias_latipes_hni
ENSSFOG00015008836	zranb1	98	85.286	ENSORLG00015005231	ZRANB1	99	85.000	Oryzias_latipes_hsok
ENSSFOG00015008836	zranb1	98	83.470	ENSORLG00015014410	zranb1b	99	83.607	Oryzias_latipes_hsok
ENSSFOG00015008836	zranb1	98	85.429	ENSOMEG00000010975	zranb1a	99	85.143	Oryzias_melastigma
ENSSFOG00015008836	zranb1	98	84.016	ENSOMEG00000000652	ZRANB1	99	84.016	Oryzias_melastigma
ENSSFOG00015008836	zranb1	99	89.220	ENSOGAG00000008345	ZRANB1	98	88.762	Otolemur_garnettii
ENSSFOG00015008836	zranb1	98	89.189	ENSOARG00000010740	ZRANB1	95	88.762	Ovis_aries
ENSSFOG00015008836	zranb1	98	89.316	ENSPPAG00000036455	ZRANB1	95	88.889	Pan_paniscus
ENSSFOG00015008836	zranb1	98	88.604	ENSPPRG00000017274	ZRANB1	98	88.177	Panthera_pardus
ENSSFOG00015008836	zranb1	97	87.954	ENSPTIG00000018595	ZRANB1	97	87.518	Panthera_tigris_altaica
ENSSFOG00015008836	zranb1	98	89.316	ENSPTRG00000003034	ZRANB1	95	88.889	Pan_troglodytes
ENSSFOG00015008836	zranb1	100	88.219	ENSPANG00000020320	ZRANB1	97	89.016	Papio_anubis
ENSSFOG00015008836	zranb1	99	90.057	ENSPKIG00000003627	ZRANB1	94	89.459	Paramormyrops_kingsleyae
ENSSFOG00015008836	zranb1	99	70.490	ENSPMGG00000004770	-	99	71.510	Periophthalmus_magnuspinnatus
ENSSFOG00015008836	zranb1	98	86.115	ENSPMGG00000014814	zranb1b	98	86.396	Periophthalmus_magnuspinnatus
ENSSFOG00015008836	zranb1	99	88.277	ENSPEMG00000021601	-	98	87.819	Peromyscus_maniculatus_bairdii
ENSSFOG00015008836	zranb1	98	89.174	ENSPCIG00000023095	ZRANB1	98	88.746	Phascolarctos_cinereus
ENSSFOG00015008836	zranb1	98	83.175	ENSPFOG00000017835	zranb1b	99	83.175	Poecilia_formosa
ENSSFOG00015008836	zranb1	99	80.418	ENSPLAG00000014945	zranb1b	99	80.759	Poecilia_latipinna
ENSSFOG00015008836	zranb1	98	84.615	ENSPMEG00000011255	zranb1b	99	84.615	Poecilia_mexicana
ENSSFOG00015008836	zranb1	98	84.319	ENSPREG00000011524	zranb1b	99	84.319	Poecilia_reticulata
ENSSFOG00015008836	zranb1	98	89.459	ENSPPYG00000002745	ZRANB1	95	89.031	Pongo_abelii
ENSSFOG00015008836	zranb1	90	87.676	ENSPCAG00000006314	ZRANB1	100	87.207	Procavia_capensis
ENSSFOG00015008836	zranb1	98	86.460	ENSPCOG00000020131	ZRANB1	98	86.017	Propithecus_coquereli
ENSSFOG00015008836	zranb1	90	88.456	ENSPVAG00000017928	ZRANB1	100	87.988	Pteropus_vampyrus
ENSSFOG00015008836	zranb1	99	85.393	ENSPNYG00000004021	ZRANB1	98	85.352	Pundamilia_nyererei
ENSSFOG00015008836	zranb1	99	86.119	ENSPNYG00000001475	zranb1a	99	85.917	Pundamilia_nyererei
ENSSFOG00015008836	zranb1	99	87.729	ENSPNAG00000014798	-	98	87.412	Pygocentrus_nattereri
ENSSFOG00015008836	zranb1	99	79.916	ENSPNAG00000008717	zranb1b	98	79.720	Pygocentrus_nattereri
ENSSFOG00015008836	zranb1	98	89.031	ENSRNOG00000017294	Zranb1	95	88.604	Rattus_norvegicus
ENSSFOG00015008836	zranb1	98	86.060	ENSRBIG00000012257	ZRANB1	95	85.633	Rhinopithecus_bieti
ENSSFOG00015008836	zranb1	98	89.459	ENSRROG00000039732	ZRANB1	95	89.031	Rhinopithecus_roxellana
ENSSFOG00015008836	zranb1	98	89.459	ENSSBOG00000034635	ZRANB1	95	89.031	Saimiri_boliviensis_boliviensis
ENSSFOG00015008836	zranb1	99	89.347	ENSSHAG00000005534	ZRANB1	98	88.889	Sarcophilus_harrisii
ENSSFOG00015008836	zranb1	99	85.938	ENSSMAG00000002965	zranb1a	99	85.613	Scophthalmus_maximus
ENSSFOG00015008836	zranb1	99	85.068	ENSSDUG00000016090	ZRANB1	99	85.165	Seriola_dumerili
ENSSFOG00015008836	zranb1	99	87.535	ENSSDUG00000018599	zranb1a	99	87.340	Seriola_dumerili
ENSSFOG00015008836	zranb1	99	84.490	ENSSLDG00000016768	ZRANB1	99	84.584	Seriola_lalandi_dorsalis
ENSSFOG00015008836	zranb1	99	87.535	ENSSLDG00000024682	zranb1a	96	87.340	Seriola_lalandi_dorsalis
ENSSFOG00015008836	zranb1	98	89.316	ENSSPUG00000012970	ZRANB1	98	88.889	Sphenodon_punctatus
ENSSFOG00015008836	zranb1	98	87.011	ENSSPAG00000011464	ZRANB1	98	87.011	Stegastes_partitus
ENSSFOG00015008836	zranb1	99	86.969	ENSSPAG00000015578	zranb1a	99	86.771	Stegastes_partitus
ENSSFOG00015008836	zranb1	98	89.459	ENSSSCG00000010738	ZRANB1	98	89.031	Sus_scrofa
ENSSFOG00015008836	zranb1	98	90.028	ENSTGUG00000011458	ZRANB1	98	89.601	Taeniopygia_guttata
ENSSFOG00015008836	zranb1	99	84.247	ENSTRUG00000001497	zranb1b	99	84.457	Takifugu_rubripes
ENSSFOG00015008836	zranb1	99	84.986	ENSTRUG00000009736	ZRANB1	99	84.943	Takifugu_rubripes
ENSSFOG00015008836	zranb1	98	89.174	ENSTTRG00000012645	ZRANB1	98	88.746	Tursiops_truncatus
ENSSFOG00015008836	zranb1	98	89.174	ENSUAMG00000015841	ZRANB1	98	88.746	Ursus_americanus
ENSSFOG00015008836	zranb1	98	86.040	ENSUMAG00000005395	ZRANB1	95	85.613	Ursus_maritimus
ENSSFOG00015008836	zranb1	90	81.123	ENSVPAG00000010654	ZRANB1	100	80.655	Vicugna_pacos
ENSSFOG00015008836	zranb1	99	89.205	ENSVVUG00000005988	ZRANB1	95	88.746	Vulpes_vulpes
ENSSFOG00015008836	zranb1	98	85.613	ENSXETG00000023629	zranb1	98	85.328	Xenopus_tropicalis
ENSSFOG00015008836	zranb1	98	84.110	ENSXCOG00000009868	zranb1b	99	84.110	Xiphophorus_couchianus
ENSSFOG00015008836	zranb1	98	85.994	ENSXMAG00000012557	zranb1b	98	85.994	Xiphophorus_maculatus