EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015008864 (Gene tree)
Gene ID: 108930394
Gene Symbol: sf3b4
Alias: chunp6902|fb36a04|wu:fb36a04
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 3949 bases
Position: chrKV410920.1:1030366-1034314
Accession: 108930394
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015013725	RRM_1	PF00076.22	3.6e-39	1	2
ENSSFOP00015013725	RRM_1	PF00076.22	3.6e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015013895	-	1984	XM_018745611	ENSSFOP00015013725	407 (aa)	XP_018601127	A0A1W4ZBJ9

Gene Model

Click here to download ENSSFOG00015008864's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015008864's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015008864	sf3b4	72	37.879	ENSSFOG00015010315	celf5b	51	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015008864	sf3b4	56	98.246	ENSG00000143368	SF3B4	100	96.842	Homo_sapiens
ENSSFOG00015008864	sf3b4	60	97.531	ENSAPOG00000017647	sf3b4	61	97.531	Acanthochromis_polyacanthus
ENSSFOG00015008864	sf3b4	56	98.246	ENSAMEG00000010073	SF3B4	56	96.624	Ailuropoda_melanoleuca
ENSSFOG00015008864	sf3b4	63	91.085	ENSACIG00000018455	sf3b4	70	96.624	Amphilophus_citrinellus
ENSSFOG00015008864	sf3b4	60	97.942	ENSAOCG00000019801	sf3b4	61	97.942	Amphiprion_ocellaris
ENSSFOG00015008864	sf3b4	60	97.942	ENSAPEG00000010365	sf3b4	61	97.942	Amphiprion_percula
ENSSFOG00015008864	sf3b4	67	95.956	ENSATEG00000012844	sf3b4	60	97.119	Anabas_testudineus
ENSSFOG00015008864	sf3b4	53	100.000	ENSACAG00000010019	SF3B4	57	97.468	Anolis_carolinensis
ENSSFOG00015008864	sf3b4	56	98.246	ENSANAG00000031025	SF3B4	56	96.624	Aotus_nancymaae
ENSSFOG00015008864	sf3b4	66	94.403	ENSACLG00000014260	sf3b4	61	97.119	Astatotilapia_calliptera
ENSSFOG00015008864	sf3b4	69	96.454	ENSAMXG00000008282	sf3b4	70	96.454	Astyanax_mexicanus
ENSSFOG00015008864	sf3b4	56	98.246	ENSBTAG00000012495	SF3B4	56	96.624	Bos_taurus
ENSSFOG00015008864	sf3b4	50	96.535	ENSBTAG00000012793	-	52	94.787	Bos_taurus
ENSSFOG00015008864	sf3b4	62	73.228	WBGene00004723	sap-49	54	81.991	Caenorhabditis_elegans
ENSSFOG00015008864	sf3b4	56	98.246	ENSCAFG00000011617	SF3B4	56	96.624	Canis_familiaris
ENSSFOG00015008864	sf3b4	56	98.246	ENSCAFG00020019775	SF3B4	56	96.624	Canis_lupus_dingo
ENSSFOG00015008864	sf3b4	56	98.246	ENSCHIG00000025663	-	56	96.624	Capra_hircus
ENSSFOG00015008864	sf3b4	56	98.246	ENSTSYG00000009295	SF3B4	56	96.624	Carlito_syrichta
ENSSFOG00015008864	sf3b4	60	89.848	ENSCAPG00000006451	SF3B4	51	96.133	Cavia_aperea
ENSSFOG00015008864	sf3b4	56	98.246	ENSCPOG00000008267	SF3B4	56	96.624	Cavia_porcellus
ENSSFOG00015008864	sf3b4	56	97.368	ENSCCAG00000021751	-	53	95.781	Cebus_capucinus
ENSSFOG00015008864	sf3b4	72	72.258	ENSCCAG00000019823	-	50	88.095	Cebus_capucinus
ENSSFOG00015008864	sf3b4	56	98.246	ENSCATG00000033114	SF3B4	56	96.624	Cercocebus_atys
ENSSFOG00015008864	sf3b4	56	98.246	ENSCLAG00000015851	SF3B4	56	96.624	Chinchilla_lanigera
ENSSFOG00015008864	sf3b4	56	98.246	ENSCSAG00000018129	SF3B4	56	96.624	Chlorocebus_sabaeus
ENSSFOG00015008864	sf3b4	53	100.000	ENSCPBG00000008041	SF3B4	57	97.046	Chrysemys_picta_bellii
ENSSFOG00015008864	sf3b4	53	90.654	ENSCING00000002337	-	57	90.521	Ciona_intestinalis
ENSSFOG00015008864	sf3b4	51	91.429	ENSCSAVG00000007809	-	88	89.697	Ciona_savignyi
ENSSFOG00015008864	sf3b4	56	98.246	ENSCANG00000035579	SF3B4	56	96.624	Colobus_angolensis_palliatus
ENSSFOG00015008864	sf3b4	56	98.246	ENSCGRG00001003590	Sf3b4	56	96.624	Cricetulus_griseus_chok1gshd
ENSSFOG00015008864	sf3b4	56	98.246	ENSCGRG00000016914	Sf3b4	56	96.624	Cricetulus_griseus_crigri
ENSSFOG00015008864	sf3b4	65	94.318	ENSCVAG00000005536	sf3b4	62	92.946	Cyprinodon_variegatus
ENSSFOG00015008864	sf3b4	60	96.708	ENSDARG00000018574	sf3b4	61	96.708	Danio_rerio
ENSSFOG00015008864	sf3b4	54	92.727	ENSDNOG00000048908	-	55	91.266	Dasypus_novemcinctus
ENSSFOG00015008864	sf3b4	97	62.260	ENSDNOG00000037231	-	50	87.245	Dasypus_novemcinctus
ENSSFOG00015008864	sf3b4	56	98.246	ENSDORG00000016366	Sf3b4	56	96.624	Dipodomys_ordii
ENSSFOG00015008864	sf3b4	56	88.158	ENSETEG00000008963	SF3B4	56	86.920	Echinops_telfairi
ENSSFOG00015008864	sf3b4	56	98.246	ENSEASG00005001477	SF3B4	56	96.624	Equus_asinus_asinus
ENSSFOG00015008864	sf3b4	56	98.246	ENSECAG00000024737	SF3B4	56	96.624	Equus_caballus
ENSSFOG00015008864	sf3b4	86	93.750	ENSELUG00000012876	sf3b4	60	98.354	Esox_lucius
ENSSFOG00015008864	sf3b4	56	98.246	ENSFCAG00000010106	SF3B4	56	96.624	Felis_catus
ENSSFOG00015008864	sf3b4	56	98.246	ENSFDAG00000009286	SF3B4	56	96.624	Fukomys_damarensis
ENSSFOG00015008864	sf3b4	84	75.358	ENSGMOG00000002519	sf3b4	70	95.781	Gadus_morhua
ENSSFOG00015008864	sf3b4	53	100.000	ENSGALG00000013352	SF3B4	57	97.468	Gallus_gallus
ENSSFOG00015008864	sf3b4	65	96.591	ENSGAFG00000010181	sf3b4	61	98.333	Gambusia_affinis
ENSSFOG00015008864	sf3b4	56	100.000	ENSGACG00000003819	sf3b4	60	97.890	Gasterosteus_aculeatus
ENSSFOG00015008864	sf3b4	53	100.000	ENSGAGG00000025055	SF3B4	50	97.046	Gopherus_agassizii
ENSSFOG00015008864	sf3b4	76	70.347	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSSFOG00015008864	sf3b4	56	98.246	ENSGGOG00000004761	SF3B4	56	96.624	Gorilla_gorilla
ENSSFOG00015008864	sf3b4	66	94.403	ENSHBUG00000002028	sf3b4	61	97.119	Haplochromis_burtoni
ENSSFOG00015008864	sf3b4	56	98.246	ENSHGLG00000012360	SF3B4	56	96.624	Heterocephalus_glaber_female
ENSSFOG00015008864	sf3b4	56	98.246	ENSHGLG00100008533	SF3B4	56	96.624	Heterocephalus_glaber_male
ENSSFOG00015008864	sf3b4	56	97.357	ENSHCOG00000003014	sf3b4	57	96.943	Hippocampus_comes
ENSSFOG00015008864	sf3b4	71	95.486	ENSIPUG00000012242	Sf3b4	72	95.470	Ictalurus_punctatus
ENSSFOG00015008864	sf3b4	56	98.246	ENSSTOG00000000684	-	56	96.624	Ictidomys_tridecemlineatus
ENSSFOG00015008864	sf3b4	55	71.852	ENSJJAG00000022500	Sf3b4	58	70.833	Jaculus_jaculus
ENSSFOG00015008864	sf3b4	66	96.629	ENSKMAG00000008154	sf3b4	62	98.354	Kryptolebias_marmoratus
ENSSFOG00015008864	sf3b4	57	98.283	ENSLBEG00000026818	sf3b4	59	97.890	Labrus_bergylta
ENSSFOG00015008864	sf3b4	59	95.833	ENSLACG00000004436	SF3B4	66	95.833	Latimeria_chalumnae
ENSSFOG00015008864	sf3b4	59	97.917	ENSLOCG00000009048	sf3b4	57	97.917	Lepisosteus_oculatus
ENSSFOG00015008864	sf3b4	76	79.012	ENSLAFG00000008531	SF3B4	56	96.624	Loxodonta_africana
ENSSFOG00015008864	sf3b4	86	63.305	ENSMFAG00000039067	-	60	78.571	Macaca_fascicularis
ENSSFOG00015008864	sf3b4	56	98.246	ENSMFAG00000042395	SF3B4	56	96.624	Macaca_fascicularis
ENSSFOG00015008864	sf3b4	56	98.246	ENSMMUG00000007256	SF3B4	56	96.624	Macaca_mulatta
ENSSFOG00015008864	sf3b4	56	98.246	ENSMNEG00000031839	SF3B4	56	96.624	Macaca_nemestrina
ENSSFOG00015008864	sf3b4	86	62.745	ENSMNEG00000031526	-	60	78.125	Macaca_nemestrina
ENSSFOG00015008864	sf3b4	56	98.246	ENSMLEG00000038667	SF3B4	56	96.624	Mandrillus_leucophaeus
ENSSFOG00015008864	sf3b4	71	95.876	ENSMAMG00000014692	sf3b4	71	96.099	Mastacembelus_armatus
ENSSFOG00015008864	sf3b4	66	94.403	ENSMZEG00005026741	sf3b4	61	97.119	Maylandia_zebra
ENSSFOG00015008864	sf3b4	53	100.000	ENSMGAG00000000653	SF3B4	57	97.468	Meleagris_gallopavo
ENSSFOG00015008864	sf3b4	56	98.246	ENSMAUG00000015266	Sf3b4	56	96.624	Mesocricetus_auratus
ENSSFOG00015008864	sf3b4	56	98.246	ENSMICG00000044961	SF3B4	56	96.624	Microcebus_murinus
ENSSFOG00015008864	sf3b4	50	98.049	ENSMOCG00000014155	-	56	94.298	Microtus_ochrogaster
ENSSFOG00015008864	sf3b4	56	98.246	ENSMOCG00000013658	-	56	96.624	Microtus_ochrogaster
ENSSFOG00015008864	sf3b4	56	98.246	ENSMODG00000018767	SF3B4	56	96.624	Monodelphis_domestica
ENSSFOG00015008864	sf3b4	66	94.424	ENSMALG00000006174	sf3b4	60	97.531	Monopterus_albus
ENSSFOG00015008864	sf3b4	56	98.246	MGP_CAROLIEiJ_G0025365	Sf3b4	56	96.624	Mus_caroli
ENSSFOG00015008864	sf3b4	56	98.246	ENSMUSG00000068856	Sf3b4	56	96.624	Mus_musculus
ENSSFOG00015008864	sf3b4	56	98.246	MGP_PahariEiJ_G0026809	Sf3b4	56	96.624	Mus_pahari
ENSSFOG00015008864	sf3b4	56	98.246	MGP_SPRETEiJ_G0026309	Sf3b4	56	96.624	Mus_spretus
ENSSFOG00015008864	sf3b4	56	98.246	ENSMPUG00000005563	SF3B4	56	96.624	Mustela_putorius_furo
ENSSFOG00015008864	sf3b4	56	98.246	ENSMLUG00000010789	SF3B4	56	96.624	Myotis_lucifugus
ENSSFOG00015008864	sf3b4	76	79.257	ENSNGAG00000016337	Sf3b4	56	96.624	Nannospalax_galili
ENSSFOG00015008864	sf3b4	66	94.776	ENSNBRG00000013865	sf3b4	61	97.531	Neolamprologus_brichardi
ENSSFOG00015008864	sf3b4	99	63.810	ENSNLEG00000000537	-	60	87.342	Nomascus_leucogenys
ENSSFOG00015008864	sf3b4	56	93.860	ENSOPRG00000010808	SF3B4	56	92.405	Ochotona_princeps
ENSSFOG00015008864	sf3b4	88	60.484	ENSODEG00000008916	-	55	76.415	Octodon_degus
ENSSFOG00015008864	sf3b4	75	69.159	ENSODEG00000003597	-	59	80.498	Octodon_degus
ENSSFOG00015008864	sf3b4	66	94.776	ENSONIG00000002730	sf3b4	61	97.531	Oreochromis_niloticus
ENSSFOG00015008864	sf3b4	64	72.556	ENSOANG00000004768	-	50	81.776	Ornithorhynchus_anatinus
ENSSFOG00015008864	sf3b4	56	98.246	ENSOCUG00000004614	SF3B4	56	96.624	Oryctolagus_cuniculus
ENSSFOG00015008864	sf3b4	74	90.759	ENSORLG00000003062	sf3b4	61	97.468	Oryzias_latipes
ENSSFOG00015008864	sf3b4	74	90.759	ENSORLG00020000687	sf3b4	59	97.468	Oryzias_latipes_hni
ENSSFOG00015008864	sf3b4	74	90.759	ENSORLG00015010989	sf3b4	59	97.468	Oryzias_latipes_hsok
ENSSFOG00015008864	sf3b4	57	99.138	ENSOMEG00000013694	sf3b4	60	98.312	Oryzias_melastigma
ENSSFOG00015008864	sf3b4	56	98.246	ENSOGAG00000006265	SF3B4	56	96.624	Otolemur_garnettii
ENSSFOG00015008864	sf3b4	56	98.246	ENSOARG00000020718	-	56	96.624	Ovis_aries
ENSSFOG00015008864	sf3b4	72	69.836	ENSOARG00000007368	-	55	81.778	Ovis_aries
ENSSFOG00015008864	sf3b4	56	98.246	ENSPPAG00000040904	SF3B4	56	96.624	Pan_paniscus
ENSSFOG00015008864	sf3b4	77	74.613	ENSPPAG00000030024	-	58	86.498	Pan_paniscus
ENSSFOG00015008864	sf3b4	56	98.246	ENSPPRG00000007384	SF3B4	56	96.624	Panthera_pardus
ENSSFOG00015008864	sf3b4	56	98.246	ENSPTIG00000014530	SF3B4	56	96.624	Panthera_tigris_altaica
ENSSFOG00015008864	sf3b4	77	74.603	ENSPTRG00000049727	-	59	86.920	Pan_troglodytes
ENSSFOG00015008864	sf3b4	56	98.246	ENSPTRG00000001243	SF3B4	56	96.624	Pan_troglodytes
ENSSFOG00015008864	sf3b4	56	98.246	ENSPANG00000005126	SF3B4	56	96.624	Papio_anubis
ENSSFOG00015008864	sf3b4	69	98.582	ENSPKIG00000020669	sf3b4	75	98.582	Paramormyrops_kingsleyae
ENSSFOG00015008864	sf3b4	56	98.246	ENSPEMG00000017568	Sf3b4	56	96.624	Peromyscus_maniculatus_bairdii
ENSSFOG00015008864	sf3b4	52	95.305	ENSPMAG00000007842	-	50	95.283	Petromyzon_marinus
ENSSFOG00015008864	sf3b4	56	98.246	ENSPCIG00000008765	SF3B4	56	96.624	Phascolarctos_cinereus
ENSSFOG00015008864	sf3b4	66	95.131	ENSPFOG00000005754	sf3b4	62	97.119	Poecilia_formosa
ENSSFOG00015008864	sf3b4	66	95.131	ENSPLAG00000001401	sf3b4	67	97.119	Poecilia_latipinna
ENSSFOG00015008864	sf3b4	66	95.131	ENSPREG00000011076	sf3b4	60	97.119	Poecilia_reticulata
ENSSFOG00015008864	sf3b4	51	96.635	ENSPCAG00000000392	SF3B4	50	96.635	Procavia_capensis
ENSSFOG00015008864	sf3b4	56	98.246	ENSPCOG00000015399	SF3B4	56	96.624	Propithecus_coquereli
ENSSFOG00015008864	sf3b4	56	98.246	ENSPVAG00000014171	SF3B4	56	96.624	Pteropus_vampyrus
ENSSFOG00015008864	sf3b4	66	94.403	ENSPNYG00000012700	sf3b4	61	97.119	Pundamilia_nyererei
ENSSFOG00015008864	sf3b4	71	95.833	ENSPNAG00000000686	sf3b4	72	95.775	Pygocentrus_nattereri
ENSSFOG00015008864	sf3b4	56	98.246	ENSRNOG00000021181	Sf3b4	56	96.624	Rattus_norvegicus
ENSSFOG00015008864	sf3b4	56	98.246	ENSRBIG00000043392	SF3B4	56	96.624	Rhinopithecus_bieti
ENSSFOG00015008864	sf3b4	56	98.246	ENSRROG00000029366	SF3B4	56	96.624	Rhinopithecus_roxellana
ENSSFOG00015008864	sf3b4	86	60.221	ENSRROG00000028213	-	58	73.799	Rhinopithecus_roxellana
ENSSFOG00015008864	sf3b4	56	97.807	ENSSBOG00000012310	-	56	96.203	Saimiri_boliviensis_boliviensis
ENSSFOG00015008864	sf3b4	76	65.000	ENSSBOG00000025174	-	51	75.105	Saimiri_boliviensis_boliviensis
ENSSFOG00015008864	sf3b4	56	93.421	ENSSHAG00000004043	SF3B4	55	91.983	Sarcophilus_harrisii
ENSSFOG00015008864	sf3b4	84	90.379	ENSSMAG00000006837	sf3b4	61	97.942	Scophthalmus_maximus
ENSSFOG00015008864	sf3b4	71	96.220	ENSSDUG00000012064	sf3b4	70	96.454	Seriola_dumerili
ENSSFOG00015008864	sf3b4	71	95.533	ENSSLDG00000014226	sf3b4	70	95.745	Seriola_lalandi_dorsalis
ENSSFOG00015008864	sf3b4	71	96.564	ENSSPAG00000019219	sf3b4	70	96.809	Stegastes_partitus
ENSSFOG00015008864	sf3b4	76	78.947	ENSSSCG00000006665	-	56	96.624	Sus_scrofa
ENSSFOG00015008864	sf3b4	78	58.567	ENSSSCG00000039440	-	58	63.291	Sus_scrofa
ENSSFOG00015008864	sf3b4	58	96.203	ENSTGUG00000004470	SF3B4	93	96.203	Taeniopygia_guttata
ENSSFOG00015008864	sf3b4	79	88.162	ENSTRUG00000004516	sf3b4	60	96.624	Takifugu_rubripes
ENSSFOG00015008864	sf3b4	56	98.690	ENSTNIG00000009156	sf3b4	61	97.468	Tetraodon_nigroviridis
ENSSFOG00015008864	sf3b4	56	98.246	ENSTTRG00000005217	SF3B4	56	96.624	Tursiops_truncatus
ENSSFOG00015008864	sf3b4	56	98.246	ENSUAMG00000022468	SF3B4	56	96.624	Ursus_americanus
ENSSFOG00015008864	sf3b4	56	98.246	ENSUMAG00000003802	SF3B4	56	96.624	Ursus_maritimus
ENSSFOG00015008864	sf3b4	53	98.148	ENSVPAG00000008152	SF3B4	55	96.444	Vicugna_pacos
ENSSFOG00015008864	sf3b4	56	98.246	ENSVVUG00000007732	-	61	96.624	Vulpes_vulpes
ENSSFOG00015008864	sf3b4	75	82.680	ENSXETG00000011038	sf3b4	53	100.000	Xenopus_tropicalis
ENSSFOG00015008864	sf3b4	66	96.255	ENSXCOG00000019895	sf3b4	62	98.354	Xiphophorus_couchianus
ENSSFOG00015008864	sf3b4	65	96.970	ENSXMAG00000003772	sf3b4	62	98.354	Xiphophorus_maculatus