EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015008920 (Gene tree)
Gene ID: 108926918
Gene Symbol: tnrc6a
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 35091 bases
Position: chrKV410785.1:2864146-2899236
Accession: 108926918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015013869	Ago_hook	PF10427.9	6.6e-10	1	1
ENSSFOP00015013891	Ago_hook	PF10427.9	7.2e-10	1	1
ENSSFOP00015013844	Ago_hook	PF10427.9	5.7e-09	1	1
ENSSFOP00015013809	Ago_hook	PF10427.9	8.2e-08	1	1
ENSSFOP00015013843	Ago_hook	PF10427.9	8.2e-08	1	1
ENSSFOP00015013829	Ago_hook	PF10427.9	9.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015013979	-	10879	XM_018739920	ENSSFOP00015013809	1872 (aa)	XP_018595436	-
ENSSFOT00015014062	-	10172	-	ENSSFOP00015013891	1753 (aa)	-	-
ENSSFOT00015013999	-	10609	-	ENSSFOP00015013829	1727 (aa)	-	-
ENSSFOT00015014039	-	11188	-	ENSSFOP00015013869	1815 (aa)	-	-
ENSSFOT00015014014	-	10835	-	ENSSFOP00015013844	1770 (aa)	-	-
ENSSFOT00015014013	-	11141	-	ENSSFOP00015013843	1872 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015008920's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015008920's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015008920	tnrc6a	52	42.327	ENSSFOG00015006475	tnrc6c1	75	40.117

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015008920	tnrc6a	99	63.759	ENSG00000090905	TNRC6A	100	84.375	Homo_sapiens
ENSSFOG00015008920	tnrc6a	99	67.820	ENSAMEG00000009333	TNRC6A	89	67.814	Ailuropoda_melanoleuca
ENSSFOG00015008920	tnrc6a	100	62.809	ENSAPLG00000009978	TNRC6A	94	60.422	Anas_platyrhynchos
ENSSFOG00015008920	tnrc6a	95	50.118	ENSACAG00000011857	TNRC6A	90	47.981	Anolis_carolinensis
ENSSFOG00015008920	tnrc6a	98	78.004	ENSANAG00000025252	TNRC6A	88	65.569	Aotus_nancymaae
ENSSFOG00015008920	tnrc6a	99	66.933	ENSAMXG00000019919	tnrc6a	99	79.958	Astyanax_mexicanus
ENSSFOG00015008920	tnrc6a	99	63.557	ENSBTAG00000017999	TNRC6A	90	66.038	Bos_taurus
ENSSFOG00015008920	tnrc6a	98	78.004	ENSCJAG00000020677	TNRC6A	87	65.569	Callithrix_jacchus
ENSSFOG00015008920	tnrc6a	99	67.669	ENSCAFG00000017531	TNRC6A	87	67.665	Canis_familiaris
ENSSFOG00015008920	tnrc6a	99	64.962	ENSCAFG00020021160	TNRC6A	88	64.970	Canis_lupus_dingo
ENSSFOG00015008920	tnrc6a	100	57.673	ENSCHIG00000019448	TNRC6A	97	58.158	Capra_hircus
ENSSFOG00015008920	tnrc6a	98	78.004	ENSTSYG00000012711	TNRC6A	88	67.515	Carlito_syrichta
ENSSFOG00015008920	tnrc6a	100	57.479	ENSCPOG00000036684	TNRC6A	91	58.131	Cavia_porcellus
ENSSFOG00015008920	tnrc6a	98	78.004	ENSCCAG00000033664	TNRC6A	88	65.569	Cebus_capucinus
ENSSFOG00015008920	tnrc6a	98	78.004	ENSCATG00000019284	TNRC6A	87	67.365	Cercocebus_atys
ENSSFOG00015008920	tnrc6a	99	56.944	ENSCLAG00000010217	TNRC6A	90	57.033	Chinchilla_lanigera
ENSSFOG00015008920	tnrc6a	99	63.910	ENSCSAG00000006561	TNRC6A	87	67.365	Chlorocebus_sabaeus
ENSSFOG00015008920	tnrc6a	91	83.476	ENSCHOG00000009374	TNRC6A	83	83.476	Choloepus_hoffmanni
ENSSFOG00015008920	tnrc6a	96	83.186	ENSCPBG00000001881	TNRC6A	100	60.665	Chrysemys_picta_bellii
ENSSFOG00015008920	tnrc6a	99	63.910	ENSCANG00000041549	TNRC6A	87	67.365	Colobus_angolensis_palliatus
ENSSFOG00015008920	tnrc6a	99	69.115	ENSCGRG00001015021	Tnrc6a	90	67.216	Cricetulus_griseus_chok1gshd
ENSSFOG00015008920	tnrc6a	99	58.222	ENSCGRG00000013351	Tnrc6a	91	58.384	Cricetulus_griseus_crigri
ENSSFOG00015008920	tnrc6a	99	68.971	ENSDARG00000079688	tnrc6a	99	84.668	Danio_rerio
ENSSFOG00015008920	tnrc6a	99	63.964	ENSDNOG00000013989	TNRC6A	89	66.517	Dasypus_novemcinctus
ENSSFOG00015008920	tnrc6a	93	78.765	ENSETEG00000014658	TNRC6A	90	78.765	Echinops_telfairi
ENSSFOG00015008920	tnrc6a	99	64.812	ENSEASG00005017693	TNRC6A	93	66.816	Equus_asinus_asinus
ENSSFOG00015008920	tnrc6a	99	64.662	ENSECAG00000025056	TNRC6A	93	66.667	Equus_caballus
ENSSFOG00015008920	tnrc6a	98	65.957	ENSEEUG00000004530	TNRC6A	92	54.221	Erinaceus_europaeus
ENSSFOG00015008920	tnrc6a	95	82.561	ENSFCAG00000025236	TNRC6A	89	67.365	Felis_catus
ENSSFOG00015008920	tnrc6a	96	83.223	ENSFALG00000003757	TNRC6A	91	60.195	Ficedula_albicollis
ENSSFOG00015008920	tnrc6a	96	82.781	ENSGALG00000006068	TNRC6A	100	61.299	Gallus_gallus
ENSSFOG00015008920	tnrc6a	96	83.223	ENSGAGG00000023209	TNRC6A	100	60.773	Gopherus_agassizii
ENSSFOG00015008920	tnrc6a	99	63.759	ENSGGOG00000005137	TNRC6A	88	67.216	Gorilla_gorilla
ENSSFOG00015008920	tnrc6a	99	57.421	ENSHGLG00000012474	-	91	57.348	Heterocephalus_glaber_female
ENSSFOG00015008920	tnrc6a	96	66.667	ENSHGLG00000007368	-	89	66.287	Heterocephalus_glaber_female
ENSSFOG00015008920	tnrc6a	99	57.549	ENSHGLG00100012496	-	92	57.475	Heterocephalus_glaber_male
ENSSFOG00015008920	tnrc6a	99	69.323	ENSSTOG00000023394	TNRC6A	86	67.515	Ictidomys_tridecemlineatus
ENSSFOG00015008920	tnrc6a	96	83.221	ENSLACG00000006277	TNRC6A	94	83.257	Latimeria_chalumnae
ENSSFOG00015008920	tnrc6a	100	81.575	ENSLOCG00000005517	tnrc6a	89	91.383	Lepisosteus_oculatus
ENSSFOG00015008920	tnrc6a	100	57.552	ENSLAFG00000004209	TNRC6A	93	58.223	Loxodonta_africana
ENSSFOG00015008920	tnrc6a	99	63.910	ENSMFAG00000003824	TNRC6A	88	67.515	Macaca_fascicularis
ENSSFOG00015008920	tnrc6a	99	63.910	ENSMMUG00000020428	TNRC6A	87	67.515	Macaca_mulatta
ENSSFOG00015008920	tnrc6a	99	69.115	ENSMNEG00000034854	TNRC6A	88	67.515	Macaca_nemestrina
ENSSFOG00015008920	tnrc6a	99	63.910	ENSMLEG00000042737	TNRC6A	86	67.365	Mandrillus_leucophaeus
ENSSFOG00015008920	tnrc6a	100	62.591	ENSMGAG00000006455	TNRC6A	90	60.270	Meleagris_gallopavo
ENSSFOG00015008920	tnrc6a	99	58.533	ENSMAUG00000012750	Tnrc6a	91	58.615	Mesocricetus_auratus
ENSSFOG00015008920	tnrc6a	99	64.962	ENSMICG00000030685	TNRC6A	88	67.515	Microcebus_murinus
ENSSFOG00015008920	tnrc6a	99	58.703	ENSMOCG00000000152	Tnrc6a	91	58.918	Microtus_ochrogaster
ENSSFOG00015008920	tnrc6a	100	62.249	ENSMODG00000016348	TNRC6A	90	60.096	Monodelphis_domestica
ENSSFOG00015008920	tnrc6a	100	57.871	MGP_CAROLIEiJ_G0030425	Tnrc6a	95	67.766	Mus_caroli
ENSSFOG00015008920	tnrc6a	100	57.960	ENSMUSG00000052707	Tnrc6a	95	67.766	Mus_musculus
ENSSFOG00015008920	tnrc6a	100	57.871	MGP_PahariEiJ_G0013635	Tnrc6a	95	67.766	Mus_pahari
ENSSFOG00015008920	tnrc6a	99	69.219	MGP_SPRETEiJ_G0031539	Tnrc6a	95	67.466	Mus_spretus
ENSSFOG00015008920	tnrc6a	93	79.350	ENSMPUG00000012324	TNRC6A	91	79.350	Mustela_putorius_furo
ENSSFOG00015008920	tnrc6a	99	67.820	ENSMLUG00000002701	TNRC6A	90	67.814	Myotis_lucifugus
ENSSFOG00015008920	tnrc6a	99	58.023	ENSNGAG00000020702	Tnrc6a	91	58.241	Nannospalax_galili
ENSSFOG00015008920	tnrc6a	98	74.089	ENSNLEG00000011851	TNRC6A	88	64.382	Nomascus_leucogenys
ENSSFOG00015008920	tnrc6a	76	71.021	ENSMEUG00000015959	-	67	70.911	Notamacropus_eugenii
ENSSFOG00015008920	tnrc6a	94	80.597	ENSOPRG00000005819	TNRC6A	86	80.597	Ochotona_princeps
ENSSFOG00015008920	tnrc6a	99	74.464	ENSODEG00000012802	TNRC6A	91	81.674	Octodon_degus
ENSSFOG00015008920	tnrc6a	92	83.664	ENSOANG00000007672	TNRC6A	96	69.012	Ornithorhynchus_anatinus
ENSSFOG00015008920	tnrc6a	99	64.565	ENSOCUG00000004325	TNRC6A	91	67.115	Oryctolagus_cuniculus
ENSSFOG00015008920	tnrc6a	99	64.662	ENSOGAG00000006666	TNRC6A	88	67.216	Otolemur_garnettii
ENSSFOG00015008920	tnrc6a	99	63.703	ENSOARG00000017950	TNRC6A	98	58.324	Ovis_aries
ENSSFOG00015008920	tnrc6a	99	63.609	ENSPPAG00000028379	TNRC6A	88	67.066	Pan_paniscus
ENSSFOG00015008920	tnrc6a	95	82.561	ENSPPRG00000005861	TNRC6A	87	67.365	Panthera_pardus
ENSSFOG00015008920	tnrc6a	95	82.561	ENSPTIG00000006346	TNRC6A	87	67.365	Panthera_tigris_altaica
ENSSFOG00015008920	tnrc6a	99	63.759	ENSPTRG00000007898	TNRC6A	88	67.216	Pan_troglodytes
ENSSFOG00015008920	tnrc6a	99	57.744	ENSPANG00000018523	TNRC6A	88	61.228	Papio_anubis
ENSSFOG00015008920	tnrc6a	97	86.634	ENSPKIG00000012859	tnrc6a	100	86.634	Paramormyrops_kingsleyae
ENSSFOG00015008920	tnrc6a	82	73.068	ENSPSIG00000003965	TNRC6A	100	57.430	Pelodiscus_sinensis
ENSSFOG00015008920	tnrc6a	99	58.621	ENSPEMG00000016318	Tnrc6a	91	58.758	Peromyscus_maniculatus_bairdii
ENSSFOG00015008920	tnrc6a	100	63.462	ENSPCIG00000012106	TNRC6A	94	62.013	Phascolarctos_cinereus
ENSSFOG00015008920	tnrc6a	99	63.759	ENSPPYG00000007202	TNRC6A	87	67.216	Pongo_abelii
ENSSFOG00015008920	tnrc6a	91	88.462	ENSPCAG00000008260	TNRC6A	82	88.462	Procavia_capensis
ENSSFOG00015008920	tnrc6a	99	65.464	ENSPCOG00000010134	TNRC6A	90	82.014	Propithecus_coquereli
ENSSFOG00015008920	tnrc6a	86	75.564	ENSPVAG00000012066	TNRC6A	90	81.140	Pteropus_vampyrus
ENSSFOG00015008920	tnrc6a	99	69.044	ENSRNOG00000024737	Tnrc6a	87	67.927	Rattus_norvegicus
ENSSFOG00015008920	tnrc6a	99	63.759	ENSRBIG00000014222	TNRC6A	88	67.216	Rhinopithecus_bieti
ENSSFOG00015008920	tnrc6a	99	63.759	ENSRROG00000032360	TNRC6A	88	67.216	Rhinopithecus_roxellana
ENSSFOG00015008920	tnrc6a	91	78.004	ENSSBOG00000036197	TNRC6A	96	65.569	Saimiri_boliviensis_boliviensis
ENSSFOG00015008920	tnrc6a	100	61.310	ENSSHAG00000008811	TNRC6A	100	61.479	Sarcophilus_harrisii
ENSSFOG00015008920	tnrc6a	63	77.358	ENSSARG00000002479	TNRC6A	75	77.358	Sorex_araneus
ENSSFOG00015008920	tnrc6a	100	60.967	ENSSPUG00000010525	TNRC6A	100	59.432	Sphenodon_punctatus
ENSSFOG00015008920	tnrc6a	95	64.812	ENSSSCG00000038870	TNRC6A	96	67.515	Sus_scrofa
ENSSFOG00015008920	tnrc6a	98	78.163	ENSTGUG00000006142	TNRC6A	92	60.133	Taeniopygia_guttata
ENSSFOG00015008920	tnrc6a	93	82.716	ENSTBEG00000014965	TNRC6A	90	82.716	Tupaia_belangeri
ENSSFOG00015008920	tnrc6a	90	69.607	ENSTTRG00000002008	TNRC6A	79	70.410	Tursiops_truncatus
ENSSFOG00015008920	tnrc6a	80	52.799	ENSUAMG00000006656	-	85	52.263	Ursus_americanus
ENSSFOG00015008920	tnrc6a	99	67.669	ENSUMAG00000008274	TNRC6A	93	67.665	Ursus_maritimus
ENSSFOG00015008920	tnrc6a	95	79.459	ENSVVUG00000005380	TNRC6A	93	67.665	Vulpes_vulpes
ENSSFOG00015008920	tnrc6a	98	74.074	ENSXETG00000030437	TNRC6A	95	79.302	Xenopus_tropicalis