EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015009007 (Gene tree)
Gene ID: 108930384
Gene Symbol: rbm8a (1 of many)
Alias: fb34f03|wu:fb34f03|zgc:110525
Full Name: RNA-binding protein 8A
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 3535 bases
Position: chrKV410920.1:1093057-1096591
Accession: 108930384
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015013958	RRM_1	PF00076.22	8.5e-19	1	1
ENSSFOP00015013958	RRM_3	PF08777.11	3.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015014129	-	1275	XM_018745593	ENSSFOP00015013958	174 (aa)	XP_018601109	A0A1W4ZBK1

Gene Model

Click here to download ENSSFOG00015009007's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03013	RNA transport	KEGG
sfm03015	mRNA surveillance pathway	KEGG
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015009007's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015009007	rbm8a	89	94.839	ENSSFOG00015024171	rbm8a	89	94.839
ENSSFOG00015009007	rbm8a	62	30.263	ENSSFOG00015001257	ELAVL2	74	30.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015009007	rbm8a	87	93.377	ENSG00000265241	RBM8A	99	96.190	Homo_sapiens
ENSSFOG00015009007	rbm8a	91	95.570	ENSAPOG00000009727	rbm8a	89	96.129	Acanthochromis_polyacanthus
ENSSFOG00015009007	rbm8a	87	91.558	ENSAMEG00000017623	RBM8A	89	91.772	Ailuropoda_melanoleuca
ENSSFOG00015009007	rbm8a	92	96.250	ENSACIG00000017678	rbm8a	100	96.250	Amphilophus_citrinellus
ENSSFOG00015009007	rbm8a	91	95.570	ENSAOCG00000023887	rbm8a	75	96.129	Amphiprion_ocellaris
ENSSFOG00015009007	rbm8a	91	95.570	ENSAPEG00000022847	rbm8a	75	96.129	Amphiprion_percula
ENSSFOG00015009007	rbm8a	91	95.570	ENSATEG00000005630	rbm8a	89	96.129	Anabas_testudineus
ENSSFOG00015009007	rbm8a	87	93.377	ENSANAG00000004525	RBM8A	89	93.548	Aotus_nancymaae
ENSSFOG00015009007	rbm8a	91	95.570	ENSACLG00000009627	rbm8a	89	96.129	Astatotilapia_calliptera
ENSSFOG00015009007	rbm8a	100	96.552	ENSAMXG00000040754	rbm8a	100	96.552	Astyanax_mexicanus
ENSSFOG00015009007	rbm8a	81	54.545	WBGene00004387	rnp-4	87	59.524	Caenorhabditis_elegans
ENSSFOG00015009007	rbm8a	87	93.377	ENSCJAG00000046869	RBM8A	89	93.548	Callithrix_jacchus
ENSSFOG00015009007	rbm8a	87	93.377	ENSCAFG00000023172	RBM8A	89	93.548	Canis_familiaris
ENSSFOG00015009007	rbm8a	87	93.377	ENSCAFG00020019945	RBM8A	89	93.548	Canis_lupus_dingo
ENSSFOG00015009007	rbm8a	87	93.377	ENSCHIG00000012114	RBM8A	89	93.548	Capra_hircus
ENSSFOG00015009007	rbm8a	87	93.377	ENSTSYG00000028809	RBM8A	89	93.548	Carlito_syrichta
ENSSFOG00015009007	rbm8a	64	93.750	ENSCAPG00000014086	RBM8A	86	95.283	Cavia_aperea
ENSSFOG00015009007	rbm8a	91	93.038	ENSCPOG00000022453	RBM8A	92	93.548	Cavia_porcellus
ENSSFOG00015009007	rbm8a	87	93.377	ENSCCAG00000028589	-	89	93.548	Cebus_capucinus
ENSSFOG00015009007	rbm8a	87	92.715	ENSCCAG00000022460	-	89	92.903	Cebus_capucinus
ENSSFOG00015009007	rbm8a	87	93.377	ENSCATG00000021691	RBM8A	89	93.548	Cercocebus_atys
ENSSFOG00015009007	rbm8a	87	93.377	ENSCLAG00000000547	RBM8A	89	93.548	Chinchilla_lanigera
ENSSFOG00015009007	rbm8a	87	93.377	ENSCSAG00000001779	RBM8A	89	93.548	Chlorocebus_sabaeus
ENSSFOG00015009007	rbm8a	87	94.040	ENSCPBG00000007941	RBM8A	71	94.194	Chrysemys_picta_bellii
ENSSFOG00015009007	rbm8a	91	64.780	ENSCING00000004877	-	91	65.806	Ciona_intestinalis
ENSSFOG00015009007	rbm8a	89	67.308	ENSCSAVG00000005685	-	92	67.308	Ciona_savignyi
ENSSFOG00015009007	rbm8a	87	93.377	ENSCANG00000042182	RBM8A	89	93.548	Colobus_angolensis_palliatus
ENSSFOG00015009007	rbm8a	99	78.613	ENSCGRG00001003032	-	89	78.710	Cricetulus_griseus_chok1gshd
ENSSFOG00015009007	rbm8a	87	93.377	ENSCGRG00001002681	-	89	93.548	Cricetulus_griseus_chok1gshd
ENSSFOG00015009007	rbm8a	87	93.377	ENSCGRG00000006832	-	89	93.548	Cricetulus_griseus_crigri
ENSSFOG00015009007	rbm8a	91	94.937	ENSCSEG00000011865	rbm8a	89	95.484	Cynoglossus_semilaevis
ENSSFOG00015009007	rbm8a	91	91.772	ENSCVAG00000020734	rbm8a	88	92.258	Cyprinodon_variegatus
ENSSFOG00015009007	rbm8a	100	97.701	ENSDARG00000016516	rbm8a	100	97.701	Danio_rerio
ENSSFOG00015009007	rbm8a	52	84.615	ENSDNOG00000025265	-	100	84.615	Dasypus_novemcinctus
ENSSFOG00015009007	rbm8a	87	93.377	ENSDORG00000027340	-	97	86.747	Dipodomys_ordii
ENSSFOG00015009007	rbm8a	95	63.095	FBgn0033378	tsu	93	64.968	Drosophila_melanogaster
ENSSFOG00015009007	rbm8a	89	78.710	ENSETEG00000017932	-	89	78.710	Echinops_telfairi
ENSSFOG00015009007	rbm8a	82	86.713	ENSETEG00000008411	-	81	86.713	Echinops_telfairi
ENSSFOG00015009007	rbm8a	90	83.974	ENSEBUG00000010386	rbm8a	89	83.871	Eptatretus_burgeri
ENSSFOG00015009007	rbm8a	87	93.377	ENSEASG00005007455	RBM8A	89	93.548	Equus_asinus_asinus
ENSSFOG00015009007	rbm8a	87	93.377	ENSECAG00000022024	RBM8A	89	93.548	Equus_caballus
ENSSFOG00015009007	rbm8a	87	64.238	ENSEEUG00000008823	RBM8A	89	65.161	Erinaceus_europaeus
ENSSFOG00015009007	rbm8a	89	96.774	ENSELUG00000012464	rbm8a	100	96.571	Esox_lucius
ENSSFOG00015009007	rbm8a	87	93.377	ENSFCAG00000033936	RBM8A	89	93.548	Felis_catus
ENSSFOG00015009007	rbm8a	87	93.377	ENSFDAG00000020821	RBM8A	89	93.548	Fukomys_damarensis
ENSSFOG00015009007	rbm8a	91	92.405	ENSFHEG00000013538	rbm8a	88	92.903	Fundulus_heteroclitus
ENSSFOG00015009007	rbm8a	82	94.366	ENSGMOG00000007353	rbm8a	87	94.964	Gadus_morhua
ENSSFOG00015009007	rbm8a	87	80.132	ENSGALG00000036283	RBM8A	88	80.645	Gallus_gallus
ENSSFOG00015009007	rbm8a	91	93.038	ENSGAFG00000021698	rbm8a	89	93.548	Gambusia_affinis
ENSSFOG00015009007	rbm8a	82	92.254	ENSGACG00000013157	rbm8a	87	92.806	Gasterosteus_aculeatus
ENSSFOG00015009007	rbm8a	87	94.040	ENSGAGG00000023769	RBM8A	89	94.194	Gopherus_agassizii
ENSSFOG00015009007	rbm8a	87	93.377	ENSGGOG00000037248	RBM8A	89	93.548	Gorilla_gorilla
ENSSFOG00015009007	rbm8a	92	95.625	ENSHBUG00000008827	rbm8a	97	96.129	Haplochromis_burtoni
ENSSFOG00015009007	rbm8a	87	93.377	ENSHGLG00000007303	RBM8A	89	93.548	Heterocephalus_glaber_female
ENSSFOG00015009007	rbm8a	87	93.377	ENSHGLG00100012468	RBM8A	89	93.548	Heterocephalus_glaber_male
ENSSFOG00015009007	rbm8a	90	94.231	ENSHCOG00000010122	rbm8a	88	94.194	Hippocampus_comes
ENSSFOG00015009007	rbm8a	89	95.484	ENSIPUG00000006525	rbm8a	80	95.484	Ictalurus_punctatus
ENSSFOG00015009007	rbm8a	87	92.715	ENSSTOG00000013917	RBM8A	89	92.903	Ictidomys_tridecemlineatus
ENSSFOG00015009007	rbm8a	87	93.377	ENSJJAG00000009488	-	89	93.548	Jaculus_jaculus
ENSSFOG00015009007	rbm8a	91	93.038	ENSKMAG00000014454	rbm8a	89	93.548	Kryptolebias_marmoratus
ENSSFOG00015009007	rbm8a	100	96.000	ENSLBEG00000015720	rbm8a	100	96.000	Labrus_bergylta
ENSSFOG00015009007	rbm8a	89	93.631	ENSLACG00000014365	RBM8A	89	93.631	Latimeria_chalumnae
ENSSFOG00015009007	rbm8a	100	97.701	ENSLOCG00000009082	rbm8a	100	97.701	Lepisosteus_oculatus
ENSSFOG00015009007	rbm8a	89	93.548	ENSLAFG00000021886	-	89	93.548	Loxodonta_africana
ENSSFOG00015009007	rbm8a	99	65.537	ENSLAFG00000011031	-	88	65.823	Loxodonta_africana
ENSSFOG00015009007	rbm8a	87	93.377	ENSMFAG00000045376	RBM8A	89	93.548	Macaca_fascicularis
ENSSFOG00015009007	rbm8a	92	88.623	ENSMMUG00000016051	RBM8A	97	88.889	Macaca_mulatta
ENSSFOG00015009007	rbm8a	87	93.377	ENSMNEG00000040422	RBM8A	89	93.548	Macaca_nemestrina
ENSSFOG00015009007	rbm8a	87	93.377	ENSMLEG00000039155	RBM8A	89	93.548	Mandrillus_leucophaeus
ENSSFOG00015009007	rbm8a	91	93.038	ENSMAMG00000010565	rbm8a	89	93.548	Mastacembelus_armatus
ENSSFOG00015009007	rbm8a	91	95.570	ENSMZEG00005016453	rbm8a	89	96.129	Maylandia_zebra
ENSSFOG00015009007	rbm8a	87	93.377	ENSMAUG00000016783	-	97	87.273	Mesocricetus_auratus
ENSSFOG00015009007	rbm8a	92	74.375	ENSMICG00000037163	-	94	76.471	Microcebus_murinus
ENSSFOG00015009007	rbm8a	87	93.377	ENSMICG00000031698	-	89	93.548	Microcebus_murinus
ENSSFOG00015009007	rbm8a	87	93.377	ENSMOCG00000017782	-	89	93.548	Microtus_ochrogaster
ENSSFOG00015009007	rbm8a	92	81.875	ENSMMOG00000017179	rbm8a	91	81.935	Mola_mola
ENSSFOG00015009007	rbm8a	87	92.715	ENSMODG00000018752	RBM8A	89	92.903	Monodelphis_domestica
ENSSFOG00015009007	rbm8a	91	92.405	ENSMALG00000010145	rbm8a	89	92.903	Monopterus_albus
ENSSFOG00015009007	rbm8a	87	93.377	MGP_CAROLIEiJ_G0025383	Rbm8a	97	86.747	Mus_caroli
ENSSFOG00015009007	rbm8a	87	90.728	MGP_CAROLIEiJ_G0014951	Rbm8a2	89	90.968	Mus_caroli
ENSSFOG00015009007	rbm8a	87	93.377	ENSMUSG00000038374	Rbm8a	97	86.747	Mus_musculus
ENSSFOG00015009007	rbm8a	87	91.391	ENSMUSG00000078184	Rbm8a2	89	91.613	Mus_musculus
ENSSFOG00015009007	rbm8a	87	93.377	MGP_PahariEiJ_G0026828	-	97	86.747	Mus_pahari
ENSSFOG00015009007	rbm8a	87	93.377	MGP_SPRETEiJ_G0026330	Rbm8a	97	86.747	Mus_spretus
ENSSFOG00015009007	rbm8a	87	93.377	ENSMPUG00000000775	RBM8A	89	93.548	Mustela_putorius_furo
ENSSFOG00015009007	rbm8a	87	93.377	ENSMLUG00000017436	-	89	93.548	Myotis_lucifugus
ENSSFOG00015009007	rbm8a	87	85.430	ENSMLUG00000022711	-	89	85.806	Myotis_lucifugus
ENSSFOG00015009007	rbm8a	89	93.548	ENSNGAG00000016038	-	89	93.548	Nannospalax_galili
ENSSFOG00015009007	rbm8a	91	95.570	ENSNBRG00000004541	rbm8a	89	96.129	Neolamprologus_brichardi
ENSSFOG00015009007	rbm8a	87	93.377	ENSNLEG00000029632	RBM8A	89	93.548	Nomascus_leucogenys
ENSSFOG00015009007	rbm8a	62	92.593	ENSMEUG00000016058	RBM8A	85	92.857	Notamacropus_eugenii
ENSSFOG00015009007	rbm8a	66	92.105	ENSOPRG00000013316	RBM8A	100	92.105	Ochotona_princeps
ENSSFOG00015009007	rbm8a	87	93.377	ENSODEG00000000114	-	89	93.548	Octodon_degus
ENSSFOG00015009007	rbm8a	87	79.470	ENSODEG00000002094	-	88	80.000	Octodon_degus
ENSSFOG00015009007	rbm8a	87	80.132	ENSODEG00000008563	-	89	80.645	Octodon_degus
ENSSFOG00015009007	rbm8a	91	95.570	ENSONIG00000008608	rbm8a	89	96.129	Oreochromis_niloticus
ENSSFOG00015009007	rbm8a	87	91.558	ENSOCUG00000025693	RBM8A	89	91.772	Oryctolagus_cuniculus
ENSSFOG00015009007	rbm8a	91	93.671	ENSORLG00000016263	rbm8a	89	94.194	Oryzias_latipes
ENSSFOG00015009007	rbm8a	92	93.750	ENSORLG00020012904	rbm8a	82	94.194	Oryzias_latipes_hni
ENSSFOG00015009007	rbm8a	91	93.671	ENSORLG00015018824	rbm8a	89	94.194	Oryzias_latipes_hsok
ENSSFOG00015009007	rbm8a	91	94.304	ENSOMEG00000021533	rbm8a	69	94.839	Oryzias_melastigma
ENSSFOG00015009007	rbm8a	87	91.558	ENSOGAG00000000202	RBM8A	89	91.772	Otolemur_garnettii
ENSSFOG00015009007	rbm8a	87	92.715	ENSOARG00000020634	RBM8A	89	92.903	Ovis_aries
ENSSFOG00015009007	rbm8a	87	93.377	ENSPPAG00000029116	RBM8A	89	93.548	Pan_paniscus
ENSSFOG00015009007	rbm8a	87	93.377	ENSPPRG00000008243	RBM8A	89	93.548	Panthera_pardus
ENSSFOG00015009007	rbm8a	87	93.377	ENSPTIG00000009472	RBM8A	89	93.548	Panthera_tigris_altaica
ENSSFOG00015009007	rbm8a	87	93.377	ENSPTRG00000001201	RBM8A	89	93.548	Pan_troglodytes
ENSSFOG00015009007	rbm8a	87	93.377	ENSPANG00000020584	RBM8A	89	93.548	Papio_anubis
ENSSFOG00015009007	rbm8a	90	95.541	ENSPKIG00000009551	rbm8a	66	96.129	Paramormyrops_kingsleyae
ENSSFOG00015009007	rbm8a	100	97.126	ENSPKIG00000020558	rbm8a	100	97.126	Paramormyrops_kingsleyae
ENSSFOG00015009007	rbm8a	100	96.000	ENSPMGG00000010122	rbm8a	100	96.000	Periophthalmus_magnuspinnatus
ENSSFOG00015009007	rbm8a	87	93.377	ENSPEMG00000018117	-	89	93.548	Peromyscus_maniculatus_bairdii
ENSSFOG00015009007	rbm8a	87	92.715	ENSPCIG00000011931	RBM8A	89	92.903	Phascolarctos_cinereus
ENSSFOG00015009007	rbm8a	91	93.671	ENSPFOG00000010695	rbm8a	89	94.194	Poecilia_formosa
ENSSFOG00015009007	rbm8a	91	93.671	ENSPLAG00000009183	rbm8a	89	94.194	Poecilia_latipinna
ENSSFOG00015009007	rbm8a	91	93.671	ENSPMEG00000013950	rbm8a	89	94.194	Poecilia_mexicana
ENSSFOG00015009007	rbm8a	92	93.125	ENSPREG00000017572	rbm8a	97	93.548	Poecilia_reticulata
ENSSFOG00015009007	rbm8a	87	93.377	ENSPPYG00000000929	RBM8A	89	93.548	Pongo_abelii
ENSSFOG00015009007	rbm8a	89	92.903	ENSPCAG00000002146	-	89	92.903	Procavia_capensis
ENSSFOG00015009007	rbm8a	87	93.377	ENSPCOG00000022886	RBM8A	89	93.548	Propithecus_coquereli
ENSSFOG00015009007	rbm8a	87	93.377	ENSPVAG00000014471	RBM8A	89	93.548	Pteropus_vampyrus
ENSSFOG00015009007	rbm8a	91	95.570	ENSPNYG00000013564	rbm8a	89	96.129	Pundamilia_nyererei
ENSSFOG00015009007	rbm8a	100	98.276	ENSPNAG00000028502	rbm8a	100	98.276	Pygocentrus_nattereri
ENSSFOG00015009007	rbm8a	87	93.377	ENSRNOG00000021215	Rbm8a	89	93.548	Rattus_norvegicus
ENSSFOG00015009007	rbm8a	87	93.377	ENSRBIG00000039233	RBM8A	89	93.548	Rhinopithecus_bieti
ENSSFOG00015009007	rbm8a	87	88.079	ENSRROG00000033023	-	89	87.742	Rhinopithecus_roxellana
ENSSFOG00015009007	rbm8a	87	93.377	ENSRROG00000040324	-	89	93.548	Rhinopithecus_roxellana
ENSSFOG00015009007	rbm8a	87	93.377	ENSSBOG00000031316	RBM8A	89	93.548	Saimiri_boliviensis_boliviensis
ENSSFOG00015009007	rbm8a	87	92.715	ENSSHAG00000018629	RBM8A	89	92.903	Sarcophilus_harrisii
ENSSFOG00015009007	rbm8a	91	94.304	ENSSMAG00000012998	rbm8a	89	94.839	Scophthalmus_maximus
ENSSFOG00015009007	rbm8a	91	95.570	ENSSDUG00000005911	rbm8a	89	96.129	Seriola_dumerili
ENSSFOG00015009007	rbm8a	91	95.570	ENSSLDG00000011664	rbm8a	89	96.129	Seriola_lalandi_dorsalis
ENSSFOG00015009007	rbm8a	87	93.377	ENSSARG00000013289	RBM8A	89	93.548	Sorex_araneus
ENSSFOG00015009007	rbm8a	87	94.702	ENSSPUG00000001576	RBM8A	89	94.839	Sphenodon_punctatus
ENSSFOG00015009007	rbm8a	91	95.570	ENSSPAG00000012181	rbm8a	89	96.129	Stegastes_partitus
ENSSFOG00015009007	rbm8a	87	93.377	ENSSSCG00000028509	RBM8A	89	93.548	Sus_scrofa
ENSSFOG00015009007	rbm8a	87	91.391	ENSTGUG00000004447	RBM8A	89	91.613	Taeniopygia_guttata
ENSSFOG00015009007	rbm8a	91	93.038	ENSTRUG00000013173	rbm8a	88	93.548	Takifugu_rubripes
ENSSFOG00015009007	rbm8a	91	92.405	ENSTNIG00000006869	rbm8a	89	92.903	Tetraodon_nigroviridis
ENSSFOG00015009007	rbm8a	66	92.105	ENSTBEG00000014947	RBM8A	100	92.105	Tupaia_belangeri
ENSSFOG00015009007	rbm8a	74	92.969	ENSTTRG00000009081	RBM8A	87	93.182	Tursiops_truncatus
ENSSFOG00015009007	rbm8a	87	93.377	ENSUAMG00000021929	RBM8A	89	93.548	Ursus_americanus
ENSSFOG00015009007	rbm8a	87	93.377	ENSUMAG00000010298	RBM8A	89	93.548	Ursus_maritimus
ENSSFOG00015009007	rbm8a	87	93.377	ENSVVUG00000007486	RBM8A	89	93.548	Vulpes_vulpes
ENSSFOG00015009007	rbm8a	91	93.038	ENSXCOG00000004369	rbm8a	89	93.548	Xiphophorus_couchianus
ENSSFOG00015009007	rbm8a	91	93.038	ENSXMAG00000013463	rbm8a	97	92.258	Xiphophorus_maculatus