EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015009030 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC108922958
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 7468 bases
Position: chrKV410820.1:7216434-7223901
Accession: 108922958
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015013975	Sua5_yciO_yrdC	PF01300.18	2.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015014146	-	2841	XM_018733372	ENSSFOP00015013975	642 (aa)	XP_018588888	-

Gene Model

Click here to download ENSSFOG00015009030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015009030's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015009030	-	82	32.550	ENSSFOG00015003920	-	50	33.827
ENSSFOG00015009030	-	84	34.375	ENSSFOG00015010891	si:ch211-153b23.4	59	34.405
ENSSFOG00015009030	-	96	53.150	ENSSFOG00015010910	si:ch211-153b23.3	69	53.150

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015009030	-	88	67.857	ENSACIG00000006968	si:ch211-153b23.3	66	67.857	Amphilophus_citrinellus
ENSSFOG00015009030	-	96	49.678	ENSAOCG00000010974	si:ch211-153b23.3	68	49.678	Amphiprion_ocellaris
ENSSFOG00015009030	-	66	37.529	ENSAPEG00000014665	si:ch211-153b23.4	50	37.529	Amphiprion_percula
ENSSFOG00015009030	-	96	50.000	ENSAPEG00000014700	si:ch211-153b23.3	68	50.000	Amphiprion_percula
ENSSFOG00015009030	-	96	50.242	ENSATEG00000004956	si:ch211-153b23.3	68	50.242	Anabas_testudineus
ENSSFOG00015009030	-	96	49.839	ENSACLG00000005894	si:ch211-153b23.3	68	49.839	Astatotilapia_calliptera
ENSSFOG00015009030	-	83	33.818	ENSAMXG00000013879	si:ch211-153b23.4	59	34.019	Astyanax_mexicanus
ENSSFOG00015009030	-	97	52.419	ENSAMXG00000038564	si:ch211-153b23.3	69	52.419	Astyanax_mexicanus
ENSSFOG00015009030	-	96	50.806	ENSCSEG00000014853	si:ch211-153b23.3	68	50.806	Cynoglossus_semilaevis
ENSSFOG00015009030	-	96	51.208	ENSCVAG00000021124	si:ch211-153b23.3	68	51.208	Cyprinodon_variegatus
ENSSFOG00015009030	-	65	37.081	ENSCVAG00000021145	si:ch211-153b23.4	51	37.321	Cyprinodon_variegatus
ENSSFOG00015009030	-	96	53.635	ENSDARG00000104919	si:ch211-153b23.3	69	53.635	Danio_rerio
ENSSFOG00015009030	-	90	41.053	ENSELUG00000004912	si:ch211-153b23.3	61	40.268	Esox_lucius
ENSSFOG00015009030	-	59	54.090	ENSFALG00000011333	-	100	54.090	Ficedula_albicollis
ENSSFOG00015009030	-	96	50.962	ENSFHEG00000010030	si:ch211-153b23.3	68	50.962	Fundulus_heteroclitus
ENSSFOG00015009030	-	64	36.627	ENSFHEG00000010001	si:ch211-153b23.4	50	36.867	Fundulus_heteroclitus
ENSSFOG00015009030	-	96	51.200	ENSGAFG00000007455	si:ch211-153b23.3	68	51.200	Gambusia_affinis
ENSSFOG00015009030	-	82	33.832	ENSGACG00000018253	si:ch211-153b23.4	58	34.563	Gasterosteus_aculeatus
ENSSFOG00015009030	-	64	36.211	ENSGAGG00000024601	-	54	36.211	Gopherus_agassizii
ENSSFOG00015009030	-	96	49.839	ENSHBUG00000001760	si:ch211-153b23.3	68	49.839	Haplochromis_burtoni
ENSSFOG00015009030	-	96	52.504	ENSIPUG00000015213	si:ch211-153b23.3	69	52.504	Ictalurus_punctatus
ENSSFOG00015009030	-	96	49.678	ENSKMAG00000006792	si:ch211-153b23.3	68	49.678	Kryptolebias_marmoratus
ENSSFOG00015009030	-	96	50.564	ENSLBEG00000026324	si:ch211-153b23.3	68	50.564	Labrus_bergylta
ENSSFOG00015009030	-	96	58.587	ENSLACG00000005800	-	73	58.587	Latimeria_chalumnae
ENSSFOG00015009030	-	50	64.174	ENSLACG00000017624	si:ch211-153b23.3	99	64.174	Latimeria_chalumnae
ENSSFOG00015009030	-	92	56.324	ENSLOCG00000015063	si:ch211-153b23.3	73	55.818	Lepisosteus_oculatus
ENSSFOG00015009030	-	96	51.204	ENSMAMG00000009328	si:ch211-153b23.3	68	51.204	Mastacembelus_armatus
ENSSFOG00015009030	-	96	49.678	ENSMZEG00005011450	si:ch211-153b23.3	68	49.678	Maylandia_zebra
ENSSFOG00015009030	-	58	55.733	ENSMGAG00000005489	-	100	55.145	Meleagris_gallopavo
ENSSFOG00015009030	-	96	50.962	ENSMMOG00000004436	si:ch211-153b23.3	68	50.962	Mola_mola
ENSSFOG00015009030	-	65	36.842	ENSMMOG00000004425	si:ch211-153b23.4	51	36.842	Mola_mola
ENSSFOG00015009030	-	96	50.000	ENSNBRG00000013370	si:ch211-153b23.3	68	50.000	Neolamprologus_brichardi
ENSSFOG00015009030	-	97	51.351	ENSORLG00000006161	si:ch211-153b23.3	70	51.351	Oryzias_latipes
ENSSFOG00015009030	-	92	50.336	ENSORLG00020000910	si:ch211-153b23.3	69	50.336	Oryzias_latipes_hni
ENSSFOG00015009030	-	92	50.333	ENSORLG00015003698	si:ch211-153b23.3	69	50.333	Oryzias_latipes_hsok
ENSSFOG00015009030	-	97	51.122	ENSOMEG00000007661	si:ch211-153b23.3	70	51.122	Oryzias_melastigma
ENSSFOG00015009030	-	92	52.951	ENSPKIG00000022450	si:ch211-153b23.3	69	52.951	Paramormyrops_kingsleyae
ENSSFOG00015009030	-	97	78.400	ENSPKIG00000021029	-	69	78.400	Paramormyrops_kingsleyae
ENSSFOG00015009030	-	87	59.259	ENSPMGG00000001311	si:ch211-153b23.3	73	59.877	Periophthalmus_magnuspinnatus
ENSSFOG00015009030	-	65	36.038	ENSPFOG00000012164	si:ch211-153b23.4	58	36.277	Poecilia_formosa
ENSSFOG00015009030	-	96	51.846	ENSPFOG00000012289	si:ch211-153b23.3	68	51.846	Poecilia_formosa
ENSSFOG00015009030	-	96	51.050	ENSPLAG00000016320	si:ch211-153b23.3	68	51.050	Poecilia_latipinna
ENSSFOG00015009030	-	65	36.364	ENSPLAG00000016295	si:ch211-153b23.4	51	36.603	Poecilia_latipinna
ENSSFOG00015009030	-	96	51.125	ENSPMEG00000008884	si:ch211-153b23.3	68	50.962	Poecilia_mexicana
ENSSFOG00015009030	-	96	49.839	ENSPNYG00000000251	si:ch211-153b23.3	68	49.839	Pundamilia_nyererei
ENSSFOG00015009030	-	96	53.387	ENSPNAG00000019592	si:ch211-153b23.3	68	53.387	Pygocentrus_nattereri
ENSSFOG00015009030	-	96	50.647	ENSSMAG00000005446	si:ch211-153b23.3	68	50.647	Scophthalmus_maximus
ENSSFOG00015009030	-	82	33.273	ENSSDUG00000006671	si:ch211-153b23.4	54	34.755	Seriola_dumerili
ENSSFOG00015009030	-	96	50.883	ENSSLDG00000008629	si:ch211-153b23.3	68	50.883	Seriola_lalandi_dorsalis
ENSSFOG00015009030	-	64	36.010	ENSTGUG00000005499	-	50	36.010	Taeniopygia_guttata
ENSSFOG00015009030	-	96	50.081	ENSTRUG00000020530	si:ch211-153b23.3	69	50.081	Takifugu_rubripes
ENSSFOG00015009030	-	65	37.709	ENSTRUG00000003247	si:ch211-153b23.4	51	37.709	Takifugu_rubripes
ENSSFOG00015009030	-	87	60.727	ENSTNIG00000008962	si:ch211-153b23.3	66	60.727	Tetraodon_nigroviridis
ENSSFOG00015009030	-	96	51.122	ENSXMAG00000029318	si:ch211-153b23.3	69	51.122	Xiphophorus_maculatus