EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015009289 (Gene tree)
Gene ID: -
Gene Symbol: sfpq
Alias: hm:zeh0027|wis|wu:fa11h12|wu:fd10f03|zgc:85935
Full Name: splicing factor%2C proline- and glutamine-rich-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 11659 bases
Position: chrKV411182.1:2752423-2764081
Accession: 108938900
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015014392	RRM_1	PF00076.22	2.9e-31	1	2
ENSSFOP00015014392	RRM_1	PF00076.22	2.9e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015014565	-	5913	XM_018759886	ENSSFOP00015014392	545 (aa)	XP_018615402	-

Gene Model

Click here to download ENSSFOG00015009289's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015009289's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015009289	sfpq	75	63.333	ENSSFOG00015001395	pspc1	85	60.291
ENSSFOG00015009289	sfpq	74	61.538	ENSSFOG00015008964	nono	85	68.000
ENSSFOG00015009289	sfpq	52	69.858	ENSSFOG00015000137	-	74	69.858

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015009289	sfpq	79	78.005	ENSG00000116560	SFPQ	97	74.654	Homo_sapiens
ENSSFOG00015009289	sfpq	77	82.464	ENSAPOG00000024257	sfpq	74	71.899	Acanthochromis_polyacanthus
ENSSFOG00015009289	sfpq	79	78.005	ENSAMEG00000000815	SFPQ	100	75.737	Ailuropoda_melanoleuca
ENSSFOG00015009289	sfpq	90	72.908	ENSACIG00000000905	sfpq	94	64.634	Amphilophus_citrinellus
ENSSFOG00015009289	sfpq	77	82.938	ENSAOCG00000002889	sfpq	74	71.374	Amphiprion_ocellaris
ENSSFOG00015009289	sfpq	77	82.938	ENSAPEG00000016556	sfpq	74	71.374	Amphiprion_percula
ENSSFOG00015009289	sfpq	79	84.651	ENSATEG00000002981	sfpq	80	74.031	Anabas_testudineus
ENSSFOG00015009289	sfpq	74	69.438	ENSANAG00000027438	-	64	66.412	Aotus_nancymaae
ENSSFOG00015009289	sfpq	63	59.429	ENSANAG00000037798	-	86	60.390	Aotus_nancymaae
ENSSFOG00015009289	sfpq	63	57.183	ENSANAG00000021268	-	100	54.416	Aotus_nancymaae
ENSSFOG00015009289	sfpq	83	77.412	ENSACLG00000022332	sfpq	73	72.147	Astatotilapia_calliptera
ENSSFOG00015009289	sfpq	89	77.755	ENSAMXG00000011538	sfpq	75	75.048	Astyanax_mexicanus
ENSSFOG00015009289	sfpq	79	78.005	ENSBTAG00000016328	SFPQ	69	70.431	Bos_taurus
ENSSFOG00015009289	sfpq	50	49.818	WBGene00017778	nono-1	67	50.598	Caenorhabditis_elegans
ENSSFOG00015009289	sfpq	79	78.005	ENSCJAG00000001431	SFPQ	62	75.510	Callithrix_jacchus
ENSSFOG00015009289	sfpq	79	78.005	ENSCAFG00000003595	-	74	70.637	Canis_familiaris
ENSSFOG00015009289	sfpq	79	74.545	ENSCAFG00000018271	-	74	66.599	Canis_familiaris
ENSSFOG00015009289	sfpq	79	72.500	ENSCAFG00000017608	-	71	66.942	Canis_familiaris
ENSSFOG00015009289	sfpq	79	74.545	ENSCAFG00020004881	-	74	66.465	Canis_lupus_dingo
ENSSFOG00015009289	sfpq	63	71.225	ENSCAFG00020010702	-	100	70.085	Canis_lupus_dingo
ENSSFOG00015009289	sfpq	79	78.005	ENSCHIG00000023097	SFPQ	66	72.624	Capra_hircus
ENSSFOG00015009289	sfpq	63	78.125	ENSTSYG00000037120	-	100	75.284	Carlito_syrichta
ENSSFOG00015009289	sfpq	63	66.379	ENSTSYG00000035106	-	98	64.368	Carlito_syrichta
ENSSFOG00015009289	sfpq	63	70.085	ENSCPOG00000015018	-	100	67.769	Cavia_porcellus
ENSSFOG00015009289	sfpq	79	78.005	ENSCCAG00000029361	-	62	75.510	Cebus_capucinus
ENSSFOG00015009289	sfpq	79	53.915	ENSCATG00000032664	-	68	48.276	Cercocebus_atys
ENSSFOG00015009289	sfpq	66	81.148	ENSCATG00000036179	-	63	71.462	Cercocebus_atys
ENSSFOG00015009289	sfpq	63	78.125	ENSCLAG00000009583	-	100	75.284	Chinchilla_lanigera
ENSSFOG00015009289	sfpq	79	78.005	ENSCSAG00000001082	SFPQ	69	70.431	Chlorocebus_sabaeus
ENSSFOG00015009289	sfpq	68	77.690	ENSCHOG00000009131	SFPQ	100	75.066	Choloepus_hoffmanni
ENSSFOG00015009289	sfpq	77	76.659	ENSCPBG00000018674	SFPQ	67	74.371	Chrysemys_picta_bellii
ENSSFOG00015009289	sfpq	63	78.125	ENSCANG00000028087	-	100	75.284	Colobus_angolensis_palliatus
ENSSFOG00015009289	sfpq	79	77.778	ENSCGRG00001011698	Sfpq	63	75.283	Cricetulus_griseus_chok1gshd
ENSSFOG00015009289	sfpq	77	79.070	ENSCGRG00000010128	Sfpq	95	76.744	Cricetulus_griseus_crigri
ENSSFOG00015009289	sfpq	93	72.039	ENSCSEG00000007852	sfpq	79	71.899	Cynoglossus_semilaevis
ENSSFOG00015009289	sfpq	80	76.888	ENSCVAG00000019538	sfpq	80	63.391	Cyprinodon_variegatus
ENSSFOG00015009289	sfpq	100	64.815	ENSDARG00000011564	sfpq	100	87.826	Danio_rerio
ENSSFOG00015009289	sfpq	79	78.005	ENSDNOG00000049454	SFPQ	62	75.510	Dasypus_novemcinctus
ENSSFOG00015009289	sfpq	79	78.005	ENSDORG00000008109	Sfpq	69	70.431	Dipodomys_ordii
ENSSFOG00015009289	sfpq	77	72.326	ENSETEG00000001095	SFPQ	61	66.300	Echinops_telfairi
ENSSFOG00015009289	sfpq	79	78.005	ENSEASG00005012012	SFPQ	69	70.431	Equus_asinus_asinus
ENSSFOG00015009289	sfpq	79	78.005	ENSECAG00000000642	SFPQ	69	70.431	Equus_caballus
ENSSFOG00015009289	sfpq	88	78.484	ENSELUG00000023145	sfpq	78	77.400	Esox_lucius
ENSSFOG00015009289	sfpq	79	78.005	ENSFCAG00000042862	SFPQ	69	70.431	Felis_catus
ENSSFOG00015009289	sfpq	63	76.420	ENSFALG00000000731	SFPQ	100	73.580	Ficedula_albicollis
ENSSFOG00015009289	sfpq	63	69.122	ENSFDAG00000017723	-	100	69.122	Fukomys_damarensis
ENSSFOG00015009289	sfpq	83	72.429	ENSFHEG00000015200	sfpq	61	71.490	Fundulus_heteroclitus
ENSSFOG00015009289	sfpq	89	72.047	ENSGMOG00000011957	sfpq	80	71.869	Gadus_morhua
ENSSFOG00015009289	sfpq	100	68.151	ENSGMOG00000011950	SFPQ	100	69.550	Gadus_morhua
ENSSFOG00015009289	sfpq	77	77.674	ENSGALG00000002514	SFPQ	66	75.349	Gallus_gallus
ENSSFOG00015009289	sfpq	94	67.495	ENSGAFG00000014571	sfpq	76	68.597	Gambusia_affinis
ENSSFOG00015009289	sfpq	96	66.498	ENSGACG00000002034	sfpq	83	72.780	Gasterosteus_aculeatus
ENSSFOG00015009289	sfpq	77	79.070	ENSGGOG00000026354	SFPQ	100	75.284	Gorilla_gorilla
ENSSFOG00015009289	sfpq	83	77.412	ENSHBUG00000016818	sfpq	73	72.147	Haplochromis_burtoni
ENSSFOG00015009289	sfpq	79	77.477	ENSHGLG00000012001	SFPQ	64	75.000	Heterocephalus_glaber_female
ENSSFOG00015009289	sfpq	63	78.125	ENSHGLG00100004136	-	100	75.284	Heterocephalus_glaber_male
ENSSFOG00015009289	sfpq	79	80.600	ENSHCOG00000008612	sfpq	94	59.892	Hippocampus_comes
ENSSFOG00015009289	sfpq	100	68.167	ENSIPUG00000013076	SFPQ	100	69.167	Ictalurus_punctatus
ENSSFOG00015009289	sfpq	63	78.125	ENSSTOG00000014004	-	100	75.284	Ictidomys_tridecemlineatus
ENSSFOG00015009289	sfpq	79	78.005	ENSJJAG00000015633	Sfpq	62	75.510	Jaculus_jaculus
ENSSFOG00015009289	sfpq	77	78.436	ENSKMAG00000000238	sfpq	65	67.961	Kryptolebias_marmoratus
ENSSFOG00015009289	sfpq	81	78.829	ENSLBEG00000003163	sfpq	57	81.707	Labrus_bergylta
ENSSFOG00015009289	sfpq	91	70.077	ENSLACG00000014728	SFPQ	85	68.069	Latimeria_chalumnae
ENSSFOG00015009289	sfpq	78	89.744	ENSLOCG00000001067	sfpq	99	73.524	Lepisosteus_oculatus
ENSSFOG00015009289	sfpq	79	77.778	ENSLAFG00000015951	SFPQ	70	75.283	Loxodonta_africana
ENSSFOG00015009289	sfpq	79	78.005	ENSMFAG00000000797	SFPQ	62	75.510	Macaca_fascicularis
ENSSFOG00015009289	sfpq	79	78.005	ENSMMUG00000019154	SFPQ	62	75.510	Macaca_mulatta
ENSSFOG00015009289	sfpq	79	78.005	ENSMNEG00000038895	SFPQ	69	70.431	Macaca_nemestrina
ENSSFOG00015009289	sfpq	63	75.568	ENSMLEG00000010643	-	100	72.727	Mandrillus_leucophaeus
ENSSFOG00015009289	sfpq	59	70.642	ENSMLEG00000035352	-	99	67.584	Mandrillus_leucophaeus
ENSSFOG00015009289	sfpq	96	67.377	ENSMAMG00000007875	sfpq	81	75.287	Mastacembelus_armatus
ENSSFOG00015009289	sfpq	99	60.299	ENSMZEG00005026091	sfpq	68	76.989	Maylandia_zebra
ENSSFOG00015009289	sfpq	68	75.765	ENSMGAG00000004237	SFPQ	100	70.918	Meleagris_gallopavo
ENSSFOG00015009289	sfpq	79	77.778	ENSMAUG00000006402	Sfpq	63	75.283	Mesocricetus_auratus
ENSSFOG00015009289	sfpq	79	78.005	ENSMICG00000027265	SFPQ	69	70.431	Microcebus_murinus
ENSSFOG00015009289	sfpq	79	74.830	ENSMOCG00000019075	Sfpq	91	72.562	Microtus_ochrogaster
ENSSFOG00015009289	sfpq	99	64.230	ENSMMOG00000001074	sfpq	82	71.241	Mola_mola
ENSSFOG00015009289	sfpq	79	77.273	ENSMODG00000017937	SFPQ	68	72.391	Monodelphis_domestica
ENSSFOG00015009289	sfpq	96	64.157	ENSMALG00000010381	sfpq	84	69.004	Monopterus_albus
ENSSFOG00015009289	sfpq	79	77.778	MGP_CAROLIEiJ_G0026487	Sfpq	75	66.231	Mus_caroli
ENSSFOG00015009289	sfpq	79	77.778	ENSMUSG00000028820	Sfpq	75	66.231	Mus_musculus
ENSSFOG00015009289	sfpq	79	77.778	MGP_PahariEiJ_G0028818	Sfpq	75	66.418	Mus_pahari
ENSSFOG00015009289	sfpq	79	77.778	MGP_SPRETEiJ_G0027466	Sfpq	75	66.231	Mus_spretus
ENSSFOG00015009289	sfpq	56	80.456	ENSMPUG00000014931	-	98	78.502	Mustela_putorius_furo
ENSSFOG00015009289	sfpq	77	79.070	ENSMLUG00000027090	SFPQ	96	76.744	Myotis_lucifugus
ENSSFOG00015009289	sfpq	79	78.005	ENSNGAG00000000888	Sfpq	62	75.510	Nannospalax_galili
ENSSFOG00015009289	sfpq	83	77.632	ENSNBRG00000017479	sfpq	68	77.204	Neolamprologus_brichardi
ENSSFOG00015009289	sfpq	63	78.125	ENSNLEG00000035521	-	100	75.284	Nomascus_leucogenys
ENSSFOG00015009289	sfpq	77	78.271	ENSMEUG00000014082	SFPQ	63	75.399	Notamacropus_eugenii
ENSSFOG00015009289	sfpq	77	79.070	ENSOPRG00000013696	SFPQ	61	76.744	Ochotona_princeps
ENSSFOG00015009289	sfpq	76	68.545	ENSODEG00000005485	SFPQ	95	58.157	Octodon_degus
ENSSFOG00015009289	sfpq	84	76.790	ENSONIG00000017737	sfpq	72	72.299	Oreochromis_niloticus
ENSSFOG00015009289	sfpq	63	78.063	ENSOANG00000008789	-	100	75.214	Ornithorhynchus_anatinus
ENSSFOG00015009289	sfpq	77	79.070	ENSOCUG00000001877	SFPQ	94	70.393	Oryctolagus_cuniculus
ENSSFOG00015009289	sfpq	77	80.095	ENSORLG00000007459	sfpq	57	79.858	Oryzias_latipes
ENSSFOG00015009289	sfpq	77	80.095	ENSORLG00020011818	sfpq	57	79.858	Oryzias_latipes_hni
ENSSFOG00015009289	sfpq	86	73.840	ENSORLG00015002131	sfpq	64	73.629	Oryzias_latipes_hsok
ENSSFOG00015009289	sfpq	92	70.238	ENSOMEG00000018020	sfpq	68	68.979	Oryzias_melastigma
ENSSFOG00015009289	sfpq	79	77.778	ENSOGAG00000027710	SFPQ	98	67.557	Otolemur_garnettii
ENSSFOG00015009289	sfpq	77	79.070	ENSOARG00000019439	SFPQ	66	76.744	Ovis_aries
ENSSFOG00015009289	sfpq	79	78.005	ENSPPAG00000030078	SFPQ	62	75.510	Pan_paniscus
ENSSFOG00015009289	sfpq	63	77.904	ENSPPRG00000015478	-	100	75.071	Panthera_pardus
ENSSFOG00015009289	sfpq	63	78.125	ENSPTIG00000007710	-	100	75.284	Panthera_tigris_altaica
ENSSFOG00015009289	sfpq	79	71.882	ENSPTRG00000000518	SFPQ	67	64.887	Pan_troglodytes
ENSSFOG00015009289	sfpq	79	78.005	ENSPANG00000005380	SFPQ	72	70.637	Papio_anubis
ENSSFOG00015009289	sfpq	100	80.920	ENSPKIG00000023035	sfpq	100	81.431	Paramormyrops_kingsleyae
ENSSFOG00015009289	sfpq	77	78.372	ENSPSIG00000011494	SFPQ	99	75.116	Pelodiscus_sinensis
ENSSFOG00015009289	sfpq	78	73.770	ENSPMGG00000023883	sfpq	94	59.964	Periophthalmus_magnuspinnatus
ENSSFOG00015009289	sfpq	79	77.778	ENSPEMG00000009794	Sfpq	91	75.510	Peromyscus_maniculatus_bairdii
ENSSFOG00015009289	sfpq	60	72.393	ENSPMAG00000005583	sfpq	80	65.544	Petromyzon_marinus
ENSSFOG00015009289	sfpq	79	77.045	ENSPCIG00000000923	SFPQ	63	74.773	Phascolarctos_cinereus
ENSSFOG00015009289	sfpq	96	63.860	ENSPFOG00000003127	sfpq	80	69.295	Poecilia_formosa
ENSSFOG00015009289	sfpq	84	73.144	ENSPREG00000008060	sfpq	70	67.245	Poecilia_reticulata
ENSSFOG00015009289	sfpq	79	78.005	ENSPPYG00000001560	SFPQ	69	70.431	Pongo_abelii
ENSSFOG00015009289	sfpq	77	78.605	ENSPCAG00000006164	SFPQ	60	76.279	Procavia_capensis
ENSSFOG00015009289	sfpq	79	78.005	ENSPCOG00000027127	SFPQ	69	70.431	Propithecus_coquereli
ENSSFOG00015009289	sfpq	79	75.682	ENSPVAG00000001865	SFPQ	69	68.994	Pteropus_vampyrus
ENSSFOG00015009289	sfpq	83	77.632	ENSPNYG00000007494	sfpq	73	72.008	Pundamilia_nyererei
ENSSFOG00015009289	sfpq	100	71.572	ENSPNAG00000002128	sfpq	100	72.575	Pygocentrus_nattereri
ENSSFOG00015009289	sfpq	79	77.778	ENSRNOG00000058461	Sfpq	63	75.283	Rattus_norvegicus
ENSSFOG00015009289	sfpq	79	72.109	ENSRBIG00000035286	SFPQ	100	75.284	Rhinopithecus_bieti
ENSSFOG00015009289	sfpq	79	78.005	ENSRROG00000040992	SFPQ	100	75.284	Rhinopithecus_roxellana
ENSSFOG00015009289	sfpq	61	57.602	ENSSBOG00000033925	-	86	57.237	Saimiri_boliviensis_boliviensis
ENSSFOG00015009289	sfpq	63	78.125	ENSSBOG00000024972	-	100	75.284	Saimiri_boliviensis_boliviensis
ENSSFOG00015009289	sfpq	77	74.720	ENSSHAG00000016107	-	96	71.141	Sarcophilus_harrisii
ENSSFOG00015009289	sfpq	63	75.429	ENSSHAG00000012312	-	100	72.000	Sarcophilus_harrisii
ENSSFOG00015009289	sfpq	89	71.132	ENSSMAG00000018201	sfpq	82	71.698	Scophthalmus_maximus
ENSSFOG00015009289	sfpq	96	73.396	ENSSDUG00000008402	sfpq	83	72.862	Seriola_dumerili
ENSSFOG00015009289	sfpq	96	73.585	ENSSLDG00000018917	sfpq	83	72.778	Seriola_lalandi_dorsalis
ENSSFOG00015009289	sfpq	66	78.862	ENSSARG00000006409	SFPQ	100	76.152	Sorex_araneus
ENSSFOG00015009289	sfpq	77	84.123	ENSSPAG00000016550	sfpq	76	73.269	Stegastes_partitus
ENSSFOG00015009289	sfpq	79	78.005	ENSSSCG00000035690	SFPQ	69	70.431	Sus_scrofa
ENSSFOG00015009289	sfpq	77	77.442	ENSTGUG00000001722	SFPQ	99	75.116	Taeniopygia_guttata
ENSSFOG00015009289	sfpq	81	81.306	ENSTRUG00000003783	sfpq	71	76.907	Takifugu_rubripes
ENSSFOG00015009289	sfpq	78	85.142	ENSTNIG00000011331	sfpq	71	84.906	Tetraodon_nigroviridis
ENSSFOG00015009289	sfpq	62	82.625	ENSTBEG00000006238	SFPQ	57	59.674	Tupaia_belangeri
ENSSFOG00015009289	sfpq	79	75.283	ENSTTRG00000013930	SFPQ	63	72.789	Tursiops_truncatus
ENSSFOG00015009289	sfpq	52	84.615	ENSUAMG00000026758	SFPQ	75	84.615	Ursus_americanus
ENSSFOG00015009289	sfpq	63	75.852	ENSUMAG00000008056	-	100	73.011	Ursus_maritimus
ENSSFOG00015009289	sfpq	54	85.235	ENSVPAG00000006960	-	58	72.208	Vicugna_pacos
ENSSFOG00015009289	sfpq	63	70.739	ENSVVUG00000000874	-	100	65.556	Vulpes_vulpes
ENSSFOG00015009289	sfpq	80	70.460	ENSXETG00000009682	sfpq	100	78.019	Xenopus_tropicalis
ENSSFOG00015009289	sfpq	77	73.508	ENSXMAG00000016391	sfpq	62	73.508	Xiphophorus_maculatus