EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015009401 (Gene tree)
Gene ID: 108927556
Gene Symbol: -
Alias: -
Full Name: RNA-binding Raly-like protein
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 122407 bases
Position: chrKV410874.1:2329207-2451613
Accession: 108927556
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015014569	RRM_1	PF00076.22	1.1e-10	1	1
ENSSFOP00015014578	RRM_1	PF00076.22	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015014742	-	3874	XM_018740950	ENSSFOP00015014569	294 (aa)	XP_018596466	A0A1W4YY39
ENSSFOT00015014752	-	4054	XM_018740951	ENSSFOP00015014578	294 (aa)	XP_018596467	A0A1W4YY39

Gene Model

Click here to download ENSSFOG00015009401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015009401's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015009401	-	76	56.332	ENSSFOG00015012924	-	81	77.500
ENSSFOG00015009401	-	97	76.140	ENSSFOG00015004575	-	96	76.140
ENSSFOG00015009401	-	93	58.029	ENSSFOG00015012304	raly	99	57.664
ENSSFOG00015009401	-	73	56.019	ENSSFOG00015012015	-	80	55.157

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015009401	-	100	73.986	ENSAPOG00000008744	-	100	73.986	Acanthochromis_polyacanthus
ENSSFOG00015009401	-	97	68.259	ENSACIG00000007143	-	97	68.259	Amphilophus_citrinellus
ENSSFOG00015009401	-	100	88.095	ENSAOCG00000001605	-	100	89.796	Amphiprion_ocellaris
ENSSFOG00015009401	-	100	75.000	ENSAOCG00000023599	-	100	75.000	Amphiprion_ocellaris
ENSSFOG00015009401	-	97	66.443	ENSATEG00000022219	-	93	70.805	Anabas_testudineus
ENSSFOG00015009401	-	77	87.665	ENSATEG00000023356	-	87	89.868	Anabas_testudineus
ENSSFOG00015009401	-	100	75.932	ENSACLG00000011720	-	100	75.932	Astatotilapia_calliptera
ENSSFOG00015009401	-	100	89.116	ENSACLG00000006949	-	100	89.116	Astatotilapia_calliptera
ENSSFOG00015009401	-	100	65.552	ENSAMXG00000032617	-	100	65.217	Astyanax_mexicanus
ENSSFOG00015009401	-	100	89.456	ENSAMXG00000019031	-	100	89.456	Astyanax_mexicanus
ENSSFOG00015009401	-	100	68.581	ENSCSEG00000014237	-	100	68.581	Cynoglossus_semilaevis
ENSSFOG00015009401	-	100	88.095	ENSCVAG00000018104	-	100	88.095	Cyprinodon_variegatus
ENSSFOG00015009401	-	100	74.324	ENSCVAG00000013624	-	100	74.324	Cyprinodon_variegatus
ENSSFOG00015009401	-	58	77.193	ENSDARG00000090292	ralyl	81	79.012	Danio_rerio
ENSSFOG00015009401	-	94	72.760	ENSELUG00000001702	-	97	72.378	Esox_lucius
ENSSFOG00015009401	-	56	76.364	ENSGMOG00000005914	-	100	76.364	Gadus_morhua
ENSSFOG00015009401	-	60	87.571	ENSGACG00000004991	-	91	90.361	Gasterosteus_aculeatus
ENSSFOG00015009401	-	100	75.676	ENSHBUG00000010040	-	100	75.676	Haplochromis_burtoni
ENSSFOG00015009401	-	100	89.116	ENSHBUG00000015412	-	100	89.116	Haplochromis_burtoni
ENSSFOG00015009401	-	100	88.095	ENSIPUG00000000507	ralyl	100	88.776	Ictalurus_punctatus
ENSSFOG00015009401	-	100	71.959	ENSKMAG00000022093	-	100	72.973	Kryptolebias_marmoratus
ENSSFOG00015009401	-	100	87.755	ENSKMAG00000018155	-	100	89.116	Kryptolebias_marmoratus
ENSSFOG00015009401	-	100	85.085	ENSLBEG00000011011	-	100	85.763	Labrus_bergylta
ENSSFOG00015009401	-	100	73.986	ENSLBEG00000012873	-	100	73.986	Labrus_bergylta
ENSSFOG00015009401	-	100	83.673	ENSLOCG00000012787	ralyl	99	82.993	Lepisosteus_oculatus
ENSSFOG00015009401	-	99	70.890	ENSMAMG00000001723	-	97	70.890	Mastacembelus_armatus
ENSSFOG00015009401	-	98	85.666	ENSMZEG00005018748	-	99	85.666	Maylandia_zebra
ENSSFOG00015009401	-	100	75.932	ENSMZEG00005024447	-	100	75.932	Maylandia_zebra
ENSSFOG00015009401	-	97	66.333	ENSMMOG00000020441	-	86	65.333	Mola_mola
ENSSFOG00015009401	-	100	75.676	ENSMALG00000019019	-	78	75.676	Monopterus_albus
ENSSFOG00015009401	-	100	86.735	ENSMALG00000012952	-	100	88.435	Monopterus_albus
ENSSFOG00015009401	-	98	84.300	ENSNBRG00000011376	-	99	86.007	Neolamprologus_brichardi
ENSSFOG00015009401	-	97	69.625	ENSNBRG00000011206	-	97	69.625	Neolamprologus_brichardi
ENSSFOG00015009401	-	100	72.635	ENSORLG00000017934	-	100	72.297	Oryzias_latipes
ENSSFOG00015009401	-	100	87.755	ENSORLG00000012719	-	100	89.456	Oryzias_latipes
ENSSFOG00015009401	-	100	87.755	ENSORLG00020004438	-	100	89.456	Oryzias_latipes_hni
ENSSFOG00015009401	-	100	71.959	ENSORLG00020000082	-	100	71.622	Oryzias_latipes_hni
ENSSFOG00015009401	-	100	72.973	ENSORLG00015004280	-	100	72.635	Oryzias_latipes_hsok
ENSSFOG00015009401	-	100	87.755	ENSORLG00015004727	-	100	89.456	Oryzias_latipes_hsok
ENSSFOG00015009401	-	100	88.435	ENSOMEG00000001170	-	100	90.136	Oryzias_melastigma
ENSSFOG00015009401	-	100	71.622	ENSOMEG00000011821	-	100	71.622	Oryzias_melastigma
ENSSFOG00015009401	-	100	82.034	ENSPKIG00000015926	-	100	81.356	Paramormyrops_kingsleyae
ENSSFOG00015009401	-	99	67.450	ENSPMGG00000009532	-	99	66.779	Periophthalmus_magnuspinnatus
ENSSFOG00015009401	-	80	77.824	ENSPMGG00000014481	-	98	81.513	Periophthalmus_magnuspinnatus
ENSSFOG00015009401	-	97	70.470	ENSPFOG00000006120	-	99	70.470	Poecilia_formosa
ENSSFOG00015009401	-	97	86.806	ENSPLAG00000011323	ralyl	100	88.542	Poecilia_latipinna
ENSSFOG00015009401	-	97	65.972	ENSPLAG00000009877	-	76	65.517	Poecilia_latipinna
ENSSFOG00015009401	-	97	86.806	ENSPMEG00000023847	ralyl	100	88.542	Poecilia_mexicana
ENSSFOG00015009401	-	97	65.972	ENSPMEG00000013624	-	80	65.517	Poecilia_mexicana
ENSSFOG00015009401	-	97	87.500	ENSPREG00000001956	ralyl	100	86.806	Poecilia_reticulata
ENSSFOG00015009401	-	97	73.171	ENSPREG00000013805	-	100	68.987	Poecilia_reticulata
ENSSFOG00015009401	-	97	69.625	ENSPNYG00000008772	-	97	69.625	Pundamilia_nyererei
ENSSFOG00015009401	-	98	85.666	ENSPNYG00000003548	-	99	85.666	Pundamilia_nyererei
ENSSFOG00015009401	-	100	67.677	ENSPNAG00000026098	-	100	67.007	Pygocentrus_nattereri
ENSSFOG00015009401	-	100	89.456	ENSPNAG00000000498	-	88	89.456	Pygocentrus_nattereri
ENSSFOG00015009401	-	100	88.435	ENSSMAG00000005608	-	100	88.435	Scophthalmus_maximus
ENSSFOG00015009401	-	97	71.429	ENSSMAG00000015907	-	93	71.080	Scophthalmus_maximus
ENSSFOG00015009401	-	100	75.000	ENSSDUG00000012473	-	100	75.000	Seriola_dumerili
ENSSFOG00015009401	-	100	88.095	ENSSDUG00000007587	-	100	89.796	Seriola_dumerili
ENSSFOG00015009401	-	100	87.458	ENSSLDG00000020603	-	100	89.153	Seriola_lalandi_dorsalis
ENSSFOG00015009401	-	100	74.662	ENSSLDG00000011534	-	100	74.662	Seriola_lalandi_dorsalis
ENSSFOG00015009401	-	100	63.265	ENSSPAG00000013858	-	96	63.265	Stegastes_partitus
ENSSFOG00015009401	-	82	77.178	ENSTRUG00000003829	-	95	71.579	Takifugu_rubripes
ENSSFOG00015009401	-	97	68.243	ENSTNIG00000005594	-	99	67.905	Tetraodon_nigroviridis
ENSSFOG00015009401	-	100	69.595	ENSXETG00000017729	ralyl	99	70.608	Xenopus_tropicalis
ENSSFOG00015009401	-	97	84.122	ENSXCOG00000015156	-	93	85.811	Xiphophorus_couchianus
ENSSFOG00015009401	-	100	73.986	ENSXMAG00000007614	-	100	73.986	Xiphophorus_maculatus
ENSSFOG00015009401	-	100	88.095	ENSXMAG00000008396	-	100	89.796	Xiphophorus_maculatus