EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015009566 (Gene tree)
Gene ID: 108918373
Gene Symbol: si:dkey-13a21.4
Alias: zgc:110195
Full Name: ras-related protein Rab-7a-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 7196 bases
Position: chrKV411252.1:4744938-4752133
Accession: 108918373
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015014854	MMR_HSR1	PF01926.23	1.4e-06	1	1
ENSSFOP00015014845	MMR_HSR1	PF01926.23	1.5e-06	1	1
ENSSFOP00015014862	MMR_HSR1	PF01926.23	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015015020	-	621	-	ENSSFOP00015014845	206 (aa)	-	-
ENSSFOT00015015029	-	1298	XM_018725520	ENSSFOP00015014854	204 (aa)	XP_018581036	A0A1W4XYN0
ENSSFOT00015015037	-	1346	-	ENSSFOP00015014862	220 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015009566's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm04137	Mitophagy - animal	KEGG
sfm04140	Autophagy - animal	KEGG
sfm04144	Endocytosis	KEGG
sfm04145	Phagosome	KEGG
sfm05132	Salmonella infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015009566's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015009566	si:dkey-13a21.4	82	36.095	ENSSFOG00015015034	rab2a	80	35.260
ENSSFOG00015009566	si:dkey-13a21.4	97	30.846	ENSSFOG00015019202	RAB6B	94	30.846
ENSSFOG00015009566	si:dkey-13a21.4	77	36.709	ENSSFOG00015008618	rab11al	77	35.882
ENSSFOG00015009566	si:dkey-13a21.4	77	32.500	ENSSFOG00015017512	dnajc27	59	32.500
ENSSFOG00015009566	si:dkey-13a21.4	82	30.588	ENSSFOG00015011157	-	96	31.579
ENSSFOG00015009566	si:dkey-13a21.4	95	33.824	ENSSFOG00015024042	rab11a	93	33.824
ENSSFOG00015009566	si:dkey-13a21.4	88	34.359	ENSSFOG00015009042	rab11bb	88	34.359
ENSSFOG00015009566	si:dkey-13a21.4	97	32.338	ENSSFOG00015004941	rab41	91	32.338
ENSSFOG00015009566	si:dkey-13a21.4	90	30.846	ENSSFOG00015016000	-	91	30.846
ENSSFOG00015009566	si:dkey-13a21.4	80	39.024	ENSSFOG00015021115	-	74	39.024
ENSSFOG00015009566	si:dkey-13a21.4	86	37.430	ENSSFOG00015012085	rab22a	88	37.430
ENSSFOG00015009566	si:dkey-13a21.4	87	33.889	ENSSFOG00015004325	rab34a	68	33.889
ENSSFOG00015009566	si:dkey-13a21.4	94	34.715	ENSSFOG00015021448	-	86	34.715
ENSSFOG00015009566	si:dkey-13a21.4	97	34.343	ENSSFOG00015014517	rab5a	90	34.343
ENSSFOG00015009566	si:dkey-13a21.4	84	34.302	ENSSFOG00015012604	rab23	93	34.184
ENSSFOG00015009566	si:dkey-13a21.4	83	48.023	ENSSFOG00015000053	rab9a	81	48.023
ENSSFOG00015009566	si:dkey-13a21.4	82	36.628	ENSSFOG00015016156	rab36	66	36.628
ENSSFOG00015009566	si:dkey-13a21.4	87	37.288	ENSSFOG00015017444	rab18a	71	37.288
ENSSFOG00015009566	si:dkey-13a21.4	83	35.429	ENSSFOG00015024034	rab33ba	84	35.260
ENSSFOG00015009566	si:dkey-13a21.4	75	30.357	ENSSFOG00015019261	rasl11a	63	30.357
ENSSFOG00015009566	si:dkey-13a21.4	97	31.579	ENSSFOG00015003628	-	97	31.579
ENSSFOG00015009566	si:dkey-13a21.4	83	36.842	ENSSFOG00015001293	rab1ab	83	36.842
ENSSFOG00015009566	si:dkey-13a21.4	96	33.168	ENSSFOG00015006175	zgc:101559	85	33.168
ENSSFOG00015009566	si:dkey-13a21.4	82	36.095	ENSSFOG00015000865	-	89	36.994
ENSSFOG00015009566	si:dkey-13a21.4	85	36.508	ENSSFOG00015018421	rab39b	87	36.508
ENSSFOG00015009566	si:dkey-13a21.4	86	57.386	ENSSFOG00015005076	zgc:100918	86	57.386
ENSSFOG00015009566	si:dkey-13a21.4	75	32.680	ENSSFOG00015023790	rheb	81	32.680
ENSSFOG00015009566	si:dkey-13a21.4	80	34.731	ENSSFOG00015020074	DNAJC27	61	34.731
ENSSFOG00015009566	si:dkey-13a21.4	87	35.359	ENSSFOG00015020836	rab1ba	87	35.359
ENSSFOG00015009566	si:dkey-13a21.4	97	31.841	ENSSFOG00015011268	RAB41	94	31.841
ENSSFOG00015009566	si:dkey-13a21.4	83	36.842	ENSSFOG00015011140	-	81	36.842
ENSSFOG00015009566	si:dkey-13a21.4	86	32.386	ENSSFOG00015020738	rabl2	87	30.846
ENSSFOG00015009566	si:dkey-13a21.4	81	53.293	ENSSFOG00015010492	rab9b	82	53.293
ENSSFOG00015009566	si:dkey-13a21.4	82	36.310	ENSSFOG00015012785	rab14	77	36.095
ENSSFOG00015009566	si:dkey-13a21.4	85	37.931	ENSSFOG00015015336	rab4a	82	37.430
ENSSFOG00015009566	si:dkey-13a21.4	86	57.386	ENSSFOG00015020012	rab7a	85	57.386
ENSSFOG00015009566	si:dkey-13a21.4	90	37.097	ENSSFOG00015008657	rab25a	85	37.097
ENSSFOG00015009566	si:dkey-13a21.4	81	47.590	ENSSFOG00015003259	rab9a	78	47.590
ENSSFOG00015009566	si:dkey-13a21.4	96	32.512	ENSSFOG00015020112	rab33b	92	32.512
ENSSFOG00015009566	si:dkey-13a21.4	79	35.542	ENSSFOG00015004253	rab33a	73	35.542
ENSSFOG00015009566	si:dkey-13a21.4	81	33.735	ENSSFOG00015002077	rab6a	81	33.333
ENSSFOG00015009566	si:dkey-13a21.4	75	32.026	ENSSFOG00015014992	rhebl1	81	32.026
ENSSFOG00015009566	si:dkey-13a21.4	77	35.625	ENSSFOG00015020732	rab42a	74	35.625
ENSSFOG00015009566	si:dkey-13a21.4	81	33.728	ENSSFOG00015005188	rab34	64	33.728
ENSSFOG00015009566	si:dkey-13a21.4	83	33.918	ENSSFOG00015017296	rab15	79	33.918
ENSSFOG00015009566	si:dkey-13a21.4	80	39.024	ENSSFOG00015009988	-	73	39.024
ENSSFOG00015009566	si:dkey-13a21.4	68	32.143	ENSSFOG00015014423	rras2	77	32.143
ENSSFOG00015009566	si:dkey-13a21.4	100	52.885	ENSSFOG00015011771	-	100	52.885
ENSSFOG00015009566	si:dkey-13a21.4	100	51.905	ENSSFOG00015021180	RAB7A	100	51.905
ENSSFOG00015009566	si:dkey-13a21.4	83	35.673	ENSSFOG00015006076	rab35	95	32.653
ENSSFOG00015009566	si:dkey-13a21.4	88	34.872	ENSSFOG00015005464	zgc:171927	87	34.872
ENSSFOG00015009566	si:dkey-13a21.4	82	35.260	ENSSFOG00015012088	rab42	83	33.690
ENSSFOG00015009566	si:dkey-13a21.4	91	34.946	ENSSFOG00015021754	rab13	91	34.946
ENSSFOG00015009566	si:dkey-13a21.4	76	33.544	ENSSFOG00015020319	mras	89	34.375
ENSSFOG00015009566	si:dkey-13a21.4	82	36.310	ENSSFOG00015011318	-	77	36.095
ENSSFOG00015009566	si:dkey-13a21.4	82	30.000	ENSSFOG00015003051	hrasb	91	31.492
ENSSFOG00015009566	si:dkey-13a21.4	96	33.005	ENSSFOG00015006414	-	95	33.005

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015009566	si:dkey-13a21.4	96	63.776	ENSACIG00000011024	si:dkey-13a21.4	96	63.776	Amphilophus_citrinellus
ENSSFOG00015009566	si:dkey-13a21.4	96	63.776	ENSAOCG00000020491	si:dkey-13a21.4	96	63.776	Amphiprion_ocellaris
ENSSFOG00015009566	si:dkey-13a21.4	96	63.776	ENSAPEG00000023338	si:dkey-13a21.4	88	63.776	Amphiprion_percula
ENSSFOG00015009566	si:dkey-13a21.4	96	66.327	ENSATEG00000014958	si:dkey-13a21.4	96	66.327	Anabas_testudineus
ENSSFOG00015009566	si:dkey-13a21.4	99	49.268	ENSACAG00000012345	-	99	49.268	Anolis_carolinensis
ENSSFOG00015009566	si:dkey-13a21.4	96	63.265	ENSACLG00000021109	si:dkey-13a21.4	95	63.265	Astatotilapia_calliptera
ENSSFOG00015009566	si:dkey-13a21.4	100	58.571	ENSAMXG00000032663	si:dkey-13a21.4	97	58.571	Astyanax_mexicanus
ENSSFOG00015009566	si:dkey-13a21.4	87	55.866	WBGene00004271	rab-7	86	55.866	Caenorhabditis_elegans
ENSSFOG00015009566	si:dkey-13a21.4	96	62.245	ENSCVAG00000001150	si:dkey-13a21.4	96	62.245	Cyprinodon_variegatus
ENSSFOG00015009566	si:dkey-13a21.4	100	61.463	ENSDARG00000026098	si:dkey-13a21.4	100	61.463	Danio_rerio
ENSSFOG00015009566	si:dkey-13a21.4	91	55.026	ENSDNOG00000043559	-	100	52.657	Dasypus_novemcinctus
ENSSFOG00015009566	si:dkey-13a21.4	96	62.245	ENSFHEG00000002502	si:dkey-13a21.4	95	62.245	Fundulus_heteroclitus
ENSSFOG00015009566	si:dkey-13a21.4	96	61.224	ENSGAFG00000020102	si:dkey-13a21.4	96	61.224	Gambusia_affinis
ENSSFOG00015009566	si:dkey-13a21.4	96	63.776	ENSHBUG00000014023	si:dkey-13a21.4	95	63.776	Haplochromis_burtoni
ENSSFOG00015009566	si:dkey-13a21.4	94	56.667	ENSKMAG00000021039	si:dkey-13a21.4	87	56.667	Kryptolebias_marmoratus
ENSSFOG00015009566	si:dkey-13a21.4	96	63.265	ENSLBEG00000018180	si:dkey-13a21.4	96	63.265	Labrus_bergylta
ENSSFOG00015009566	si:dkey-13a21.4	100	67.805	ENSLOCG00000014749	si:dkey-13a21.4	100	67.805	Lepisosteus_oculatus
ENSSFOG00015009566	si:dkey-13a21.4	88	55.307	ENSLAFG00000028984	-	89	54.839	Loxodonta_africana
ENSSFOG00015009566	si:dkey-13a21.4	96	64.796	ENSMAMG00000021095	si:dkey-13a21.4	96	64.796	Mastacembelus_armatus
ENSSFOG00015009566	si:dkey-13a21.4	96	63.265	ENSMZEG00005010220	si:dkey-13a21.4	95	63.265	Maylandia_zebra
ENSSFOG00015009566	si:dkey-13a21.4	96	63.776	ENSNBRG00000023214	si:dkey-13a21.4	95	63.776	Neolamprologus_brichardi
ENSSFOG00015009566	si:dkey-13a21.4	96	63.776	ENSONIG00000020296	si:dkey-13a21.4	96	63.776	Oreochromis_niloticus
ENSSFOG00015009566	si:dkey-13a21.4	96	65.306	ENSORLG00000025098	si:dkey-13a21.4	96	65.306	Oryzias_latipes
ENSSFOG00015009566	si:dkey-13a21.4	96	65.306	ENSORLG00020019465	si:dkey-13a21.4	96	65.306	Oryzias_latipes_hni
ENSSFOG00015009566	si:dkey-13a21.4	96	65.306	ENSORLG00015015121	si:dkey-13a21.4	96	65.306	Oryzias_latipes_hsok
ENSSFOG00015009566	si:dkey-13a21.4	100	70.732	ENSPKIG00000008691	si:dkey-13a21.4	100	70.732	Paramormyrops_kingsleyae
ENSSFOG00015009566	si:dkey-13a21.4	93	63.684	ENSPMGG00000023170	si:dkey-13a21.4	93	62.245	Periophthalmus_magnuspinnatus
ENSSFOG00015009566	si:dkey-13a21.4	96	60.714	ENSPFOG00000015409	si:dkey-13a21.4	96	60.714	Poecilia_formosa
ENSSFOG00015009566	si:dkey-13a21.4	96	60.714	ENSPLAG00000019688	si:dkey-13a21.4	96	60.714	Poecilia_latipinna
ENSSFOG00015009566	si:dkey-13a21.4	96	60.714	ENSPMEG00000019159	si:dkey-13a21.4	96	60.714	Poecilia_mexicana
ENSSFOG00015009566	si:dkey-13a21.4	96	60.714	ENSPREG00000022241	si:dkey-13a21.4	96	60.714	Poecilia_reticulata
ENSSFOG00015009566	si:dkey-13a21.4	96	63.265	ENSPNYG00000018613	si:dkey-13a21.4	95	63.265	Pundamilia_nyererei
ENSSFOG00015009566	si:dkey-13a21.4	89	50.270	YML001W	YPT7	89	50.270	Saccharomyces_cerevisiae
ENSSFOG00015009566	si:dkey-13a21.4	96	63.265	ENSSMAG00000013945	si:dkey-13a21.4	95	63.265	Scophthalmus_maximus
ENSSFOG00015009566	si:dkey-13a21.4	96	63.776	ENSSDUG00000019738	si:dkey-13a21.4	96	63.776	Seriola_dumerili
ENSSFOG00015009566	si:dkey-13a21.4	96	62.755	ENSSLDG00000011597	si:dkey-13a21.4	96	62.755	Seriola_lalandi_dorsalis
ENSSFOG00015009566	si:dkey-13a21.4	99	55.224	ENSXETG00000014257	mgc75872	99	58.586	Xenopus_tropicalis