EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015009612 (Gene tree)
Gene ID: 108924682
Gene Symbol: lsm12
Alias: lsm12|wu:fe01f11|zgc:66039
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 10627 bases
Position: chrKV410836.1:3835741-3846367
Accession: 108924682
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015014914	AD	PF09793.9	2.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015015089	-	2766	XM_018736218	ENSSFOP00015014914	196 (aa)	XP_018591734	A0A1W4YJH1

Gene Model

Click here to download ENSSFOG00015009612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015009612's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015009612	lsm12	100	91.837	ENSSFOG00015020392	lsm12a	100	91.837

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015009612	lsm12	100	86.224	ENSG00000161654	LSM12	100	86.224	Homo_sapiens
ENSSFOG00015009612	lsm12	100	94.898	ENSAPOG00000007907	lsm12b	100	94.898	Acanthochromis_polyacanthus
ENSSFOG00015009612	lsm12	100	84.422	ENSAMEG00000018321	LSM12	100	84.422	Ailuropoda_melanoleuca
ENSSFOG00015009612	lsm12	100	94.388	ENSACIG00000008538	lsm12b	100	94.388	Amphilophus_citrinellus
ENSSFOG00015009612	lsm12	100	95.408	ENSAOCG00000021847	lsm12b	88	95.408	Amphiprion_ocellaris
ENSSFOG00015009612	lsm12	100	95.408	ENSAPEG00000002252	lsm12b	100	95.408	Amphiprion_percula
ENSSFOG00015009612	lsm12	100	93.878	ENSATEG00000005705	lsm12b	100	93.878	Anabas_testudineus
ENSSFOG00015009612	lsm12	100	84.694	ENSACAG00000004618	LSM12	100	84.694	Anolis_carolinensis
ENSSFOG00015009612	lsm12	100	86.224	ENSANAG00000029011	LSM12	100	86.224	Aotus_nancymaae
ENSSFOG00015009612	lsm12	100	94.898	ENSACLG00000026332	lsm12b	100	94.898	Astatotilapia_calliptera
ENSSFOG00015009612	lsm12	100	92.347	ENSAMXG00000032952	lsm12b	100	92.347	Astyanax_mexicanus
ENSSFOG00015009612	lsm12	100	87.245	ENSAMXG00000036117	lsm12a	91	87.245	Astyanax_mexicanus
ENSSFOG00015009612	lsm12	100	86.224	ENSBTAG00000016252	LSM12	100	86.224	Bos_taurus
ENSSFOG00015009612	lsm12	100	86.224	ENSCJAG00000048480	LSM12	100	86.224	Callithrix_jacchus
ENSSFOG00015009612	lsm12	100	86.224	ENSCAFG00000014379	LSM12	92	86.224	Canis_familiaris
ENSSFOG00015009612	lsm12	100	86.224	ENSCAFG00020012173	LSM12	100	86.224	Canis_lupus_dingo
ENSSFOG00015009612	lsm12	100	86.224	ENSCHIG00000018175	LSM12	100	86.224	Capra_hircus
ENSSFOG00015009612	lsm12	100	86.224	ENSTSYG00000036361	LSM12	100	86.224	Carlito_syrichta
ENSSFOG00015009612	lsm12	83	82.716	ENSCAPG00000009647	LSM12	89	82.716	Cavia_aperea
ENSSFOG00015009612	lsm12	100	85.204	ENSCPOG00000012860	LSM12	100	85.204	Cavia_porcellus
ENSSFOG00015009612	lsm12	100	86.224	ENSCCAG00000032905	LSM12	100	86.224	Cebus_capucinus
ENSSFOG00015009612	lsm12	100	86.224	ENSCATG00000030577	-	100	86.224	Cercocebus_atys
ENSSFOG00015009612	lsm12	100	85.714	ENSCLAG00000015759	LSM12	100	85.714	Chinchilla_lanigera
ENSSFOG00015009612	lsm12	100	85.714	ENSCSAG00000003486	LSM12	100	85.714	Chlorocebus_sabaeus
ENSSFOG00015009612	lsm12	56	87.156	ENSCHOG00000001198	LSM12	100	87.156	Choloepus_hoffmanni
ENSSFOG00015009612	lsm12	100	84.184	ENSCPBG00000027105	LSM12	100	84.184	Chrysemys_picta_bellii
ENSSFOG00015009612	lsm12	100	86.224	ENSCANG00000043328	LSM12	100	86.224	Colobus_angolensis_palliatus
ENSSFOG00015009612	lsm12	100	86.224	ENSCGRG00001002094	Lsm12	100	86.224	Cricetulus_griseus_chok1gshd
ENSSFOG00015009612	lsm12	89	78.736	ENSCGRG00000004316	Lsm12	98	78.736	Cricetulus_griseus_crigri
ENSSFOG00015009612	lsm12	100	93.878	ENSCSEG00000008434	lsm12b	100	93.878	Cynoglossus_semilaevis
ENSSFOG00015009612	lsm12	100	93.367	ENSCVAG00000008755	lsm12b	100	93.367	Cyprinodon_variegatus
ENSSFOG00015009612	lsm12	100	85.204	ENSDARG00000028848	lsm12a	100	85.204	Danio_rerio
ENSSFOG00015009612	lsm12	100	91.837	ENSDARG00000109510	lsm12b	100	91.837	Danio_rerio
ENSSFOG00015009612	lsm12	100	86.224	ENSDNOG00000002418	LSM12	91	86.224	Dasypus_novemcinctus
ENSSFOG00015009612	lsm12	100	86.224	ENSDORG00000016381	Lsm12	100	86.224	Dipodomys_ordii
ENSSFOG00015009612	lsm12	73	32.911	FBgn0036057	CG14164	83	32.911	Drosophila_melanogaster
ENSSFOG00015009612	lsm12	83	34.337	FBgn0030364	Lsm12	76	34.337	Drosophila_melanogaster
ENSSFOG00015009612	lsm12	88	76.301	ENSETEG00000011012	-	99	76.301	Echinops_telfairi
ENSSFOG00015009612	lsm12	100	85.714	ENSETEG00000008374	LSM12	100	85.714	Echinops_telfairi
ENSSFOG00015009612	lsm12	85	65.868	ENSEBUG00000016299	lsm12a	92	65.868	Eptatretus_burgeri
ENSSFOG00015009612	lsm12	100	86.224	ENSEASG00005010155	LSM12	100	86.224	Equus_asinus_asinus
ENSSFOG00015009612	lsm12	100	86.224	ENSECAG00000009071	LSM12	100	86.224	Equus_caballus
ENSSFOG00015009612	lsm12	78	85.621	ENSEEUG00000002419	-	100	85.621	Erinaceus_europaeus
ENSSFOG00015009612	lsm12	100	90.306	ENSELUG00000000256	-	100	90.306	Esox_lucius
ENSSFOG00015009612	lsm12	100	91.327	ENSELUG00000015538	lsm12b	100	86.735	Esox_lucius
ENSSFOG00015009612	lsm12	100	86.224	ENSFCAG00000037021	LSM12	100	86.224	Felis_catus
ENSSFOG00015009612	lsm12	80	83.333	ENSFDAG00000008954	LSM12	91	83.333	Fukomys_damarensis
ENSSFOG00015009612	lsm12	100	93.367	ENSFHEG00000019913	lsm12b	100	93.367	Fundulus_heteroclitus
ENSSFOG00015009612	lsm12	81	93.671	ENSGMOG00000015449	lsm12b	100	93.671	Gadus_morhua
ENSSFOG00015009612	lsm12	78	86.928	ENSGALG00000039803	LSM12	100	86.928	Gallus_gallus
ENSSFOG00015009612	lsm12	100	93.367	ENSGAFG00000011829	lsm12b	100	93.367	Gambusia_affinis
ENSSFOG00015009612	lsm12	81	94.937	ENSGACG00000003428	lsm12b	100	94.937	Gasterosteus_aculeatus
ENSSFOG00015009612	lsm12	100	84.184	ENSGAGG00000021965	LSM12	100	84.184	Gopherus_agassizii
ENSSFOG00015009612	lsm12	100	86.224	ENSGGOG00000010589	-	100	86.224	Gorilla_gorilla
ENSSFOG00015009612	lsm12	85	95.210	ENSHBUG00000007667	lsm12b	74	95.210	Haplochromis_burtoni
ENSSFOG00015009612	lsm12	100	86.224	ENSHGLG00000011411	LSM12	100	86.224	Heterocephalus_glaber_female
ENSSFOG00015009612	lsm12	79	86.364	ENSHGLG00100000241	LSM12	82	86.364	Heterocephalus_glaber_male
ENSSFOG00015009612	lsm12	100	91.837	ENSHCOG00000002094	lsm12b	100	91.837	Hippocampus_comes
ENSSFOG00015009612	lsm12	100	92.347	ENSIPUG00000014800	lsm12	100	92.347	Ictalurus_punctatus
ENSSFOG00015009612	lsm12	99	83.505	ENSIPUG00000008936	lsm12a	99	83.505	Ictalurus_punctatus
ENSSFOG00015009612	lsm12	100	86.224	ENSSTOG00000007403	LSM12	100	86.224	Ictidomys_tridecemlineatus
ENSSFOG00015009612	lsm12	100	85.204	ENSJJAG00000004364	-	100	86.364	Jaculus_jaculus
ENSSFOG00015009612	lsm12	96	76.316	ENSJJAG00000011793	-	100	76.316	Jaculus_jaculus
ENSSFOG00015009612	lsm12	80	72.956	ENSJJAG00000014652	-	95	72.956	Jaculus_jaculus
ENSSFOG00015009612	lsm12	85	94.611	ENSKMAG00000007704	lsm12b	56	94.611	Kryptolebias_marmoratus
ENSSFOG00015009612	lsm12	100	95.408	ENSLBEG00000027999	lsm12b	100	95.408	Labrus_bergylta
ENSSFOG00015009612	lsm12	100	86.735	ENSLACG00000015981	LSM12	100	86.735	Latimeria_chalumnae
ENSSFOG00015009612	lsm12	100	89.796	ENSLOCG00000013079	lsm12b	99	89.796	Lepisosteus_oculatus
ENSSFOG00015009612	lsm12	100	86.224	ENSLAFG00000005202	LSM12	100	86.224	Loxodonta_africana
ENSSFOG00015009612	lsm12	100	86.224	ENSMFAG00000031376	LSM12	100	86.224	Macaca_fascicularis
ENSSFOG00015009612	lsm12	100	86.224	ENSMMUG00000006804	LSM12	100	86.224	Macaca_mulatta
ENSSFOG00015009612	lsm12	65	77.011	ENSMMUG00000042106	-	100	77.011	Macaca_mulatta
ENSSFOG00015009612	lsm12	100	86.224	ENSMNEG00000030594	-	100	86.224	Macaca_nemestrina
ENSSFOG00015009612	lsm12	100	86.224	ENSMLEG00000039934	LSM12	100	86.224	Mandrillus_leucophaeus
ENSSFOG00015009612	lsm12	100	94.898	ENSMAMG00000004279	lsm12b	100	94.898	Mastacembelus_armatus
ENSSFOG00015009612	lsm12	100	94.898	ENSMZEG00005005754	lsm12b	100	94.898	Maylandia_zebra
ENSSFOG00015009612	lsm12	100	85.714	ENSMICG00000037219	LSM12	100	85.714	Microcebus_murinus
ENSSFOG00015009612	lsm12	100	73.980	ENSMOCG00000017015	-	86	73.980	Microtus_ochrogaster
ENSSFOG00015009612	lsm12	100	86.224	ENSMOCG00000019878	-	100	86.224	Microtus_ochrogaster
ENSSFOG00015009612	lsm12	100	94.898	ENSMMOG00000020848	lsm12b	100	94.898	Mola_mola
ENSSFOG00015009612	lsm12	100	94.898	ENSMALG00000007578	lsm12b	100	94.898	Monopterus_albus
ENSSFOG00015009612	lsm12	100	85.714	MGP_CAROLIEiJ_G0017241	Lsm12	100	85.714	Mus_caroli
ENSSFOG00015009612	lsm12	100	86.224	ENSMUSG00000020922	Lsm12	100	86.224	Mus_musculus
ENSSFOG00015009612	lsm12	100	79.343	MGP_PahariEiJ_G0018371	Lsm12	100	79.343	Mus_pahari
ENSSFOG00015009612	lsm12	100	85.714	MGP_SPRETEiJ_G0018084	Lsm12	100	85.714	Mus_spretus
ENSSFOG00015009612	lsm12	100	85.714	ENSMLUG00000006391	LSM12	100	85.714	Myotis_lucifugus
ENSSFOG00015009612	lsm12	100	59.606	ENSNGAG00000015429	-	100	59.606	Nannospalax_galili
ENSSFOG00015009612	lsm12	100	86.224	ENSNGAG00000001870	Lsm12	100	86.224	Nannospalax_galili
ENSSFOG00015009612	lsm12	100	94.898	ENSNBRG00000006266	lsm12b	100	94.898	Neolamprologus_brichardi
ENSSFOG00015009612	lsm12	100	86.224	ENSNLEG00000005580	-	100	86.224	Nomascus_leucogenys
ENSSFOG00015009612	lsm12	85	84.940	ENSMEUG00000007501	-	100	84.940	Notamacropus_eugenii
ENSSFOG00015009612	lsm12	100	86.224	ENSOPRG00000008552	LSM12	100	86.224	Ochotona_princeps
ENSSFOG00015009612	lsm12	99	86.082	ENSODEG00000017998	-	99	86.082	Octodon_degus
ENSSFOG00015009612	lsm12	100	78.571	ENSODEG00000007886	-	74	78.571	Octodon_degus
ENSSFOG00015009612	lsm12	100	94.898	ENSONIG00000007933	lsm12b	100	94.898	Oreochromis_niloticus
ENSSFOG00015009612	lsm12	99	81.538	ENSOCUG00000021254	-	100	81.538	Oryctolagus_cuniculus
ENSSFOG00015009612	lsm12	99	80.513	ENSOCUG00000024823	-	100	80.513	Oryctolagus_cuniculus
ENSSFOG00015009612	lsm12	99	82.051	ENSOCUG00000027889	-	100	82.051	Oryctolagus_cuniculus
ENSSFOG00015009612	lsm12	100	84.422	ENSOCUG00000008566	-	100	84.422	Oryctolagus_cuniculus
ENSSFOG00015009612	lsm12	100	94.898	ENSORLG00000011310	lsm12b	100	94.898	Oryzias_latipes
ENSSFOG00015009612	lsm12	100	94.898	ENSORLG00020002060	lsm12b	92	94.898	Oryzias_latipes_hni
ENSSFOG00015009612	lsm12	100	94.898	ENSORLG00015001647	lsm12b	92	94.898	Oryzias_latipes_hsok
ENSSFOG00015009612	lsm12	100	94.898	ENSOMEG00000006184	lsm12b	92	94.898	Oryzias_melastigma
ENSSFOG00015009612	lsm12	100	85.714	ENSOGAG00000010489	LSM12	100	85.714	Otolemur_garnettii
ENSSFOG00015009612	lsm12	100	83.168	ENSOARG00000006589	LSM12	100	83.168	Ovis_aries
ENSSFOG00015009612	lsm12	100	76.531	ENSPPAG00000034974	-	100	76.531	Pan_paniscus
ENSSFOG00015009612	lsm12	100	86.224	ENSPPRG00000023420	LSM12	100	86.224	Panthera_pardus
ENSSFOG00015009612	lsm12	78	86.928	ENSPTIG00000012704	-	82	86.928	Panthera_tigris_altaica
ENSSFOG00015009612	lsm12	72	85.455	ENSPTIG00000014850	-	100	85.455	Panthera_tigris_altaica
ENSSFOG00015009612	lsm12	100	86.224	ENSPTRG00000009261	LSM12	100	86.224	Pan_troglodytes
ENSSFOG00015009612	lsm12	100	86.224	ENSPANG00000021315	-	100	86.224	Papio_anubis
ENSSFOG00015009612	lsm12	100	82.143	ENSPKIG00000017932	-	100	82.143	Paramormyrops_kingsleyae
ENSSFOG00015009612	lsm12	100	93.367	ENSPKIG00000021058	lsm12b	100	93.367	Paramormyrops_kingsleyae
ENSSFOG00015009612	lsm12	100	93.878	ENSPMGG00000021344	lsm12b	100	93.878	Periophthalmus_magnuspinnatus
ENSSFOG00015009612	lsm12	100	86.224	ENSPEMG00000012199	Lsm12	100	86.224	Peromyscus_maniculatus_bairdii
ENSSFOG00015009612	lsm12	89	66.286	ENSPMAG00000005461	lsm12a	99	66.286	Petromyzon_marinus
ENSSFOG00015009612	lsm12	100	85.204	ENSPCIG00000020244	LSM12	100	85.204	Phascolarctos_cinereus
ENSSFOG00015009612	lsm12	100	92.347	ENSPFOG00000015930	lsm12b	100	92.347	Poecilia_formosa
ENSSFOG00015009612	lsm12	100	92.347	ENSPLAG00000021089	lsm12b	100	92.347	Poecilia_latipinna
ENSSFOG00015009612	lsm12	100	92.347	ENSPMEG00000012961	lsm12b	100	92.347	Poecilia_mexicana
ENSSFOG00015009612	lsm12	87	93.567	ENSPREG00000010236	lsm12b	95	93.567	Poecilia_reticulata
ENSSFOG00015009612	lsm12	100	86.224	ENSPPYG00000008344	LSM12	100	86.224	Pongo_abelii
ENSSFOG00015009612	lsm12	81	85.535	ENSPCAG00000008790	LSM12	100	85.535	Procavia_capensis
ENSSFOG00015009612	lsm12	100	86.224	ENSPCOG00000027951	LSM12	100	86.224	Propithecus_coquereli
ENSSFOG00015009612	lsm12	100	86.735	ENSPVAG00000013706	LSM12	100	86.735	Pteropus_vampyrus
ENSSFOG00015009612	lsm12	100	94.898	ENSPNYG00000003386	lsm12b	100	94.898	Pundamilia_nyererei
ENSSFOG00015009612	lsm12	100	91.837	ENSPNAG00000004186	lsm12b	100	91.837	Pygocentrus_nattereri
ENSSFOG00015009612	lsm12	100	85.204	ENSPNAG00000018435	lsm12a	100	85.204	Pygocentrus_nattereri
ENSSFOG00015009612	lsm12	100	86.224	ENSRNOG00000020894	Lsm12	100	86.224	Rattus_norvegicus
ENSSFOG00015009612	lsm12	100	86.224	ENSRBIG00000027910	LSM12	100	86.224	Rhinopithecus_bieti
ENSSFOG00015009612	lsm12	97	54.450	ENSRROG00000000537	-	97	54.450	Rhinopithecus_roxellana
ENSSFOG00015009612	lsm12	100	86.224	ENSRROG00000045530	-	100	86.224	Rhinopithecus_roxellana
ENSSFOG00015009612	lsm12	100	86.224	ENSSBOG00000025310	LSM12	100	86.224	Saimiri_boliviensis_boliviensis
ENSSFOG00015009612	lsm12	81	84.177	ENSSHAG00000014914	LSM12	100	84.177	Sarcophilus_harrisii
ENSSFOG00015009612	lsm12	100	94.898	ENSSMAG00000008089	lsm12b	100	94.898	Scophthalmus_maximus
ENSSFOG00015009612	lsm12	100	94.898	ENSSDUG00000012711	lsm12b	100	94.898	Seriola_dumerili
ENSSFOG00015009612	lsm12	100	94.898	ENSSLDG00000007404	lsm12b	100	94.898	Seriola_lalandi_dorsalis
ENSSFOG00015009612	lsm12	78	86.275	ENSSARG00000005537	LSM12	100	86.275	Sorex_araneus
ENSSFOG00015009612	lsm12	100	84.184	ENSSPUG00000011984	LSM12	100	84.184	Sphenodon_punctatus
ENSSFOG00015009612	lsm12	100	95.408	ENSSPAG00000017058	lsm12b	100	95.408	Stegastes_partitus
ENSSFOG00015009612	lsm12	100	86.224	ENSSSCG00000032394	LSM12	100	86.224	Sus_scrofa
ENSSFOG00015009612	lsm12	100	94.388	ENSTRUG00000007121	lsm12b	100	94.388	Takifugu_rubripes
ENSSFOG00015009612	lsm12	100	93.878	ENSTNIG00000014436	lsm12b	100	93.878	Tetraodon_nigroviridis
ENSSFOG00015009612	lsm12	100	85.714	ENSTBEG00000012523	-	100	85.714	Tupaia_belangeri
ENSSFOG00015009612	lsm12	100	82.653	ENSTBEG00000012392	-	100	82.653	Tupaia_belangeri
ENSSFOG00015009612	lsm12	100	86.224	ENSTTRG00000010433	LSM12	100	86.224	Tursiops_truncatus
ENSSFOG00015009612	lsm12	100	86.224	ENSUAMG00000006313	LSM12	100	86.224	Ursus_americanus
ENSSFOG00015009612	lsm12	81	84.177	ENSUMAG00000012987	LSM12	90	84.177	Ursus_maritimus
ENSSFOG00015009612	lsm12	100	80.612	ENSVPAG00000011145	LSM12	100	80.612	Vicugna_pacos
ENSSFOG00015009612	lsm12	100	86.224	ENSVVUG00000017581	LSM12	100	86.224	Vulpes_vulpes
ENSSFOG00015009612	lsm12	82	61.250	ENSXETG00000003371	lsm12	77	61.250	Xenopus_tropicalis
ENSSFOG00015009612	lsm12	100	93.367	ENSXCOG00000003994	lsm12b	100	93.367	Xiphophorus_couchianus
ENSSFOG00015009612	lsm12	100	93.367	ENSXMAG00000020950	lsm12b	100	93.367	Xiphophorus_maculatus