EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015009731 (Gene tree)
Gene ID: 108939654
Gene Symbol: p4ha1
Alias: si:ch211-146f4.5
Full Name: prolyl 4-hydroxylase subunit alpha 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 14817 bases
Position: chrKV411190.1:1742367-1757183
Accession: 108939654
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015015105	2OG-FeII_Oxy	PF03171.20	2.4e-08	1	1
ENSSFOP00015015051	2OG-FeII_Oxy	PF03171.20	2.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015015285	-	2338	-	ENSSFOP00015015105	537 (aa)	-	-
ENSSFOT00015015231	-	2164	XM_018761141	ENSSFOP00015015051	545 (aa)	XP_018616657	A0A1W5ASX2
ENSSFOT00015015263	-	2536	-	ENSSFOP00015015083	545 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015009731's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm00330	Arginine and proline metabolism	KEGG
sfm01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015009731's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015009731	p4ha1	97	65.326	ENSSFOG00015001608	p4ha2	100	63.654
ENSSFOG00015009731	p4ha1	99	80.261	ENSSFOG00015009176	p4ha1b	100	79.843

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015009731	p4ha1	76	61.765	ENSAPOG00000008101	p4ha1a	83	61.765	Acanthochromis_polyacanthus
ENSSFOG00015009731	p4ha1	99	73.507	ENSACIG00000014303	p4ha1a	99	73.507	Amphilophus_citrinellus
ENSSFOG00015009731	p4ha1	99	77.009	ENSAOCG00000005514	-	96	77.927	Amphiprion_ocellaris
ENSSFOG00015009731	p4ha1	99	68.598	ENSAOCG00000005531	p4ha1a	96	69.290	Amphiprion_ocellaris
ENSSFOG00015009731	p4ha1	99	76.449	ENSAPEG00000010462	-	96	77.351	Amphiprion_percula
ENSSFOG00015009731	p4ha1	99	81.296	ENSAMXG00000018364	p4ha1a	99	80.891	Astyanax_mexicanus
ENSSFOG00015009731	p4ha1	96	75.000	ENSCSEG00000001857	-	95	75.714	Cynoglossus_semilaevis
ENSSFOG00015009731	p4ha1	98	73.872	ENSCVAG00000020081	p4ha1a	95	74.806	Cyprinodon_variegatus
ENSSFOG00015009731	p4ha1	96	81.298	ENSDARG00000033537	p4ha1a	96	81.382	Danio_rerio
ENSSFOG00015009731	p4ha1	100	80.183	ENSELUG00000005174	p4ha1a	100	80.000	Esox_lucius
ENSSFOG00015009731	p4ha1	99	78.212	ENSMAMG00000010119	p4ha1a	96	79.350	Mastacembelus_armatus
ENSSFOG00015009731	p4ha1	99	70.980	ENSMMOG00000009210	-	95	73.398	Mola_mola
ENSSFOG00015009731	p4ha1	99	74.674	ENSMALG00000013083	-	95	77.857	Monopterus_albus
ENSSFOG00015009731	p4ha1	99	69.202	ENSORLG00000014906	-	91	70.485	Oryzias_latipes
ENSSFOG00015009731	p4ha1	99	70.879	ENSORLG00020015227	-	94	72.222	Oryzias_latipes_hni
ENSSFOG00015009731	p4ha1	99	70.696	ENSORLG00015012970	-	94	72.031	Oryzias_latipes_hsok
ENSSFOG00015009731	p4ha1	99	70.169	ENSOMEG00000019702	-	96	71.705	Oryzias_melastigma
ENSSFOG00015009731	p4ha1	100	84.572	ENSPKIG00000002519	p4ha1a	100	84.572	Paramormyrops_kingsleyae
ENSSFOG00015009731	p4ha1	98	74.906	ENSPREG00000016136	p4ha1a	96	76.008	Poecilia_reticulata
ENSSFOG00015009731	p4ha1	100	82.169	ENSPNAG00000025732	p4ha1a	96	82.950	Pygocentrus_nattereri
ENSSFOG00015009731	p4ha1	99	69.573	ENSTNIG00000003570	-	96	70.633	Tetraodon_nigroviridis