EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015009739 (Gene tree)
Gene ID: 108921549
Gene Symbol: tfb1m
Alias: im:7151479|zgc:153625
Full Name: transcription factor B1%2C mitochondrial
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 20500 bases
Position: chrKV410778.1:5019391-5039890
Accession: 108921549
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015015084	RrnaAD	PF00398.20	1.9e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015015264	-	1091	XM_018731047	ENSSFOP00015015084	350 (aa)	XP_018586563	A0A1W4Y451

Gene Model

Click here to download ENSSFOG00015009739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015009739's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015009739	tfb1m	57	30.198	ENSSFOG00015007217	dimt1	58	30.198

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015009739	tfb1m	99	67.919	ENSG00000029639	TFB1M	99	67.919	Homo_sapiens
ENSSFOG00015009739	tfb1m	95	75.000	ENSAPOG00000015493	tfb1m	94	75.000	Acanthochromis_polyacanthus
ENSSFOG00015009739	tfb1m	96	68.343	ENSAMEG00000012761	TFB1M	98	68.343	Ailuropoda_melanoleuca
ENSSFOG00015009739	tfb1m	94	75.758	ENSACIG00000014290	tfb1m	93	75.758	Amphilophus_citrinellus
ENSSFOG00015009739	tfb1m	98	73.837	ENSAOCG00000004027	tfb1m	96	73.837	Amphiprion_ocellaris
ENSSFOG00015009739	tfb1m	98	73.837	ENSAPEG00000020359	tfb1m	96	73.837	Amphiprion_percula
ENSSFOG00015009739	tfb1m	96	72.997	ENSATEG00000006826	tfb1m	95	72.997	Anabas_testudineus
ENSSFOG00015009739	tfb1m	99	68.588	ENSAPLG00000006328	TFB1M	99	68.588	Anas_platyrhynchos
ENSSFOG00015009739	tfb1m	57	30.693	ENSAPLG00000009464	DIMT1	69	30.693	Anas_platyrhynchos
ENSSFOG00015009739	tfb1m	99	68.696	ENSACAG00000005244	TFB1M	99	68.696	Anolis_carolinensis
ENSSFOG00015009739	tfb1m	94	69.909	ENSANAG00000021469	TFB1M	99	67.435	Aotus_nancymaae
ENSSFOG00015009739	tfb1m	99	74.783	ENSACLG00000018734	tfb1m	96	74.783	Astatotilapia_calliptera
ENSSFOG00015009739	tfb1m	95	75.976	ENSAMXG00000036128	tfb1m	91	75.976	Astyanax_mexicanus
ENSSFOG00015009739	tfb1m	99	68.195	ENSBTAG00000031895	TFB1M	98	72.072	Bos_taurus
ENSSFOG00015009739	tfb1m	57	32.673	WBGene00008455	E02H1.1	57	32.673	Caenorhabditis_elegans
ENSSFOG00015009739	tfb1m	91	44.037	WBGene00020189	tfbm-1	89	44.037	Caenorhabditis_elegans
ENSSFOG00015009739	tfb1m	94	70.303	ENSCJAG00000012540	TFB1M	96	70.303	Callithrix_jacchus
ENSSFOG00015009739	tfb1m	99	68.012	ENSCAFG00000000581	TFB1M	99	68.012	Canis_familiaris
ENSSFOG00015009739	tfb1m	99	68.012	ENSCAFG00020015224	TFB1M	99	68.012	Canis_lupus_dingo
ENSSFOG00015009739	tfb1m	95	70.359	ENSCHIG00000017013	TFB1M	100	70.359	Capra_hircus
ENSSFOG00015009739	tfb1m	98	67.544	ENSTSYG00000012298	TFB1M	99	67.544	Carlito_syrichta
ENSSFOG00015009739	tfb1m	67	51.915	ENSCAPG00000013843	TFB1M	78	51.915	Cavia_aperea
ENSSFOG00015009739	tfb1m	99	65.903	ENSCPOG00000030422	TFB1M	98	65.903	Cavia_porcellus
ENSSFOG00015009739	tfb1m	99	67.147	ENSCCAG00000015250	TFB1M	99	67.147	Cebus_capucinus
ENSSFOG00015009739	tfb1m	94	49.394	ENSCATG00000009009	TFB1M	95	49.547	Cercocebus_atys
ENSSFOG00015009739	tfb1m	94	70.303	ENSCLAG00000004500	TFB1M	96	70.303	Chinchilla_lanigera
ENSSFOG00015009739	tfb1m	92	70.279	ENSCSAG00000013259	TFB1M	96	69.789	Chlorocebus_sabaeus
ENSSFOG00015009739	tfb1m	50	31.250	ENSCHOG00000007922	DIMT1	51	31.250	Choloepus_hoffmanni
ENSSFOG00015009739	tfb1m	94	69.789	ENSCHOG00000011245	TFB1M	96	69.789	Choloepus_hoffmanni
ENSSFOG00015009739	tfb1m	97	71.471	ENSCPBG00000016320	TFB1M	99	71.471	Chrysemys_picta_bellii
ENSSFOG00015009739	tfb1m	89	45.016	ENSCING00000003901	-	81	45.016	Ciona_intestinalis
ENSSFOG00015009739	tfb1m	93	43.865	ENSCSAVG00000004721	-	85	43.865	Ciona_savignyi
ENSSFOG00015009739	tfb1m	94	70.303	ENSCANG00000029768	TFB1M	98	70.303	Colobus_angolensis_palliatus
ENSSFOG00015009739	tfb1m	100	67.143	ENSCGRG00001022866	Tfb1m	100	67.143	Cricetulus_griseus_chok1gshd
ENSSFOG00015009739	tfb1m	96	67.463	ENSCGRG00000018084	Tfb1m	100	67.463	Cricetulus_griseus_crigri
ENSSFOG00015009739	tfb1m	98	72.093	ENSCSEG00000000131	tfb1m	97	72.093	Cynoglossus_semilaevis
ENSSFOG00015009739	tfb1m	57	30.198	ENSCVAG00000012978	dimt1l	58	30.198	Cyprinodon_variegatus
ENSSFOG00015009739	tfb1m	100	71.023	ENSCVAG00000009201	tfb1m	100	71.023	Cyprinodon_variegatus
ENSSFOG00015009739	tfb1m	57	30.198	ENSDARG00000005057	dimt1l	58	30.198	Danio_rerio
ENSSFOG00015009739	tfb1m	99	73.410	ENSDARG00000040727	tfb1m	98	78.030	Danio_rerio
ENSSFOG00015009739	tfb1m	98	65.616	ENSDNOG00000015984	-	96	65.616	Dasypus_novemcinctus
ENSSFOG00015009739	tfb1m	81	59.220	ENSDNOG00000032672	-	98	59.220	Dasypus_novemcinctus
ENSSFOG00015009739	tfb1m	95	70.091	ENSDORG00000012938	Tfb1m	99	67.723	Dipodomys_ordii
ENSSFOG00015009739	tfb1m	63	30.973	FBgn0039627	CG11837	63	30.973	Drosophila_melanogaster
ENSSFOG00015009739	tfb1m	90	50.000	FBgn0261381	mtTFB1	95	50.000	Drosophila_melanogaster
ENSSFOG00015009739	tfb1m	94	49.849	ENSETEG00000005709	TFB1M	95	49.849	Echinops_telfairi
ENSSFOG00015009739	tfb1m	91	57.680	ENSEBUG00000010530	tfb1m	92	57.764	Eptatretus_burgeri
ENSSFOG00015009739	tfb1m	99	66.859	ENSEASG00005018887	TFB1M	98	66.859	Equus_asinus_asinus
ENSSFOG00015009739	tfb1m	99	67.723	ENSECAG00000020997	TFB1M	98	67.723	Equus_caballus
ENSSFOG00015009739	tfb1m	94	71.951	ENSEEUG00000014899	TFB1M	97	71.951	Erinaceus_europaeus
ENSSFOG00015009739	tfb1m	94	78.182	ENSELUG00000002752	tfb1m	84	78.182	Esox_lucius
ENSSFOG00015009739	tfb1m	94	70.303	ENSFCAG00000038785	TFB1M	96	70.303	Felis_catus
ENSSFOG00015009739	tfb1m	99	68.208	ENSFALG00000012500	TFB1M	99	68.208	Ficedula_albicollis
ENSSFOG00015009739	tfb1m	91	69.688	ENSFDAG00000016985	TFB1M	99	66.860	Fukomys_damarensis
ENSSFOG00015009739	tfb1m	96	72.997	ENSFHEG00000008407	tfb1m	96	72.997	Fundulus_heteroclitus
ENSSFOG00015009739	tfb1m	96	79.228	ENSGMOG00000018738	tfb1m	97	79.228	Gadus_morhua
ENSSFOG00015009739	tfb1m	99	67.816	ENSGALG00000013647	TFB1M	99	67.816	Gallus_gallus
ENSSFOG00015009739	tfb1m	96	72.404	ENSGAFG00000017997	tfb1m	96	72.404	Gambusia_affinis
ENSSFOG00015009739	tfb1m	94	74.164	ENSGACG00000006884	tfb1m	93	74.164	Gasterosteus_aculeatus
ENSSFOG00015009739	tfb1m	99	70.725	ENSGAGG00000025345	TFB1M	100	70.725	Gopherus_agassizii
ENSSFOG00015009739	tfb1m	99	67.919	ENSGGOG00000012189	TFB1M	99	67.919	Gorilla_gorilla
ENSSFOG00015009739	tfb1m	99	74.493	ENSHBUG00000019396	tfb1m	96	74.493	Haplochromis_burtoni
ENSSFOG00015009739	tfb1m	97	68.421	ENSHGLG00000002028	TFB1M	99	68.421	Heterocephalus_glaber_female
ENSSFOG00015009739	tfb1m	97	68.421	ENSHGLG00100001412	TFB1M	99	68.421	Heterocephalus_glaber_male
ENSSFOG00015009739	tfb1m	94	76.061	ENSHCOG00000014135	tfb1m	94	76.061	Hippocampus_comes
ENSSFOG00015009739	tfb1m	95	76.435	ENSIPUG00000010964	tfb1m	97	76.435	Ictalurus_punctatus
ENSSFOG00015009739	tfb1m	57	30.198	ENSIPUG00000008492	dimt1	58	30.198	Ictalurus_punctatus
ENSSFOG00015009739	tfb1m	99	67.429	ENSSTOG00000026264	TFB1M	99	67.429	Ictidomys_tridecemlineatus
ENSSFOG00015009739	tfb1m	96	69.254	ENSJJAG00000022171	Tfb1m	95	69.254	Jaculus_jaculus
ENSSFOG00015009739	tfb1m	94	73.636	ENSKMAG00000012667	tfb1m	95	73.636	Kryptolebias_marmoratus
ENSSFOG00015009739	tfb1m	94	74.468	ENSLBEG00000011505	tfb1m	92	74.468	Labrus_bergylta
ENSSFOG00015009739	tfb1m	94	74.242	ENSLACG00000012594	TFB1M	94	74.242	Latimeria_chalumnae
ENSSFOG00015009739	tfb1m	95	72.107	ENSLOCG00000016850	tfb1m	96	72.107	Lepisosteus_oculatus
ENSSFOG00015009739	tfb1m	92	58.385	ENSLAFG00000032309	-	100	58.385	Loxodonta_africana
ENSSFOG00015009739	tfb1m	93	71.166	ENSLAFG00000014035	-	98	69.027	Loxodonta_africana
ENSSFOG00015009739	tfb1m	94	70.000	ENSMFAG00000031968	TFB1M	96	70.000	Macaca_fascicularis
ENSSFOG00015009739	tfb1m	94	70.000	ENSMMUG00000011171	TFB1M	96	70.000	Macaca_mulatta
ENSSFOG00015009739	tfb1m	94	70.000	ENSMNEG00000042278	TFB1M	96	70.000	Macaca_nemestrina
ENSSFOG00015009739	tfb1m	94	70.000	ENSMLEG00000000044	TFB1M	96	70.000	Mandrillus_leucophaeus
ENSSFOG00015009739	tfb1m	94	74.242	ENSMAMG00000009423	tfb1m	93	74.242	Mastacembelus_armatus
ENSSFOG00015009739	tfb1m	99	74.783	ENSMZEG00005005640	tfb1m	92	74.783	Maylandia_zebra
ENSSFOG00015009739	tfb1m	76	75.472	ENSMGAG00000012779	TFB1M	100	75.472	Meleagris_gallopavo
ENSSFOG00015009739	tfb1m	99	69.054	ENSMAUG00000006705	Tfb1m	99	69.054	Mesocricetus_auratus
ENSSFOG00015009739	tfb1m	96	70.326	ENSMICG00000045849	TFB1M	98	70.326	Microcebus_murinus
ENSSFOG00015009739	tfb1m	93	69.325	ENSMOCG00000013879	Tfb1m	98	68.843	Microtus_ochrogaster
ENSSFOG00015009739	tfb1m	94	75.758	ENSMMOG00000002203	tfb1m	92	75.758	Mola_mola
ENSSFOG00015009739	tfb1m	93	70.245	ENSMODG00000008169	TFB1M	100	67.442	Monodelphis_domestica
ENSSFOG00015009739	tfb1m	98	73.837	ENSMALG00000011657	tfb1m	91	73.837	Monopterus_albus
ENSSFOG00015009739	tfb1m	99	66.762	MGP_CAROLIEiJ_G0021018	Tfb1m	99	66.762	Mus_caroli
ENSSFOG00015009739	tfb1m	99	67.049	ENSMUSG00000036983	Tfb1m	99	67.049	Mus_musculus
ENSSFOG00015009739	tfb1m	93	69.325	MGP_PahariEiJ_G0023336	Tfb1m	96	68.788	Mus_pahari
ENSSFOG00015009739	tfb1m	99	67.049	MGP_SPRETEiJ_G0021923	Tfb1m	99	67.049	Mus_spretus
ENSSFOG00015009739	tfb1m	99	67.529	ENSMPUG00000002073	TFB1M	99	67.529	Mustela_putorius_furo
ENSSFOG00015009739	tfb1m	95	70.181	ENSMLUG00000011329	TFB1M	96	70.181	Myotis_lucifugus
ENSSFOG00015009739	tfb1m	99	66.189	ENSNGAG00000015154	Tfb1m	96	66.189	Nannospalax_galili
ENSSFOG00015009739	tfb1m	96	75.668	ENSNBRG00000009004	tfb1m	94	75.668	Neolamprologus_brichardi
ENSSFOG00015009739	tfb1m	99	67.919	ENSNLEG00000034352	TFB1M	99	67.919	Nomascus_leucogenys
ENSSFOG00015009739	tfb1m	99	55.043	ENSMEUG00000001699	-	100	55.043	Notamacropus_eugenii
ENSSFOG00015009739	tfb1m	99	53.314	ENSOPRG00000008921	TFB1M	100	53.314	Ochotona_princeps
ENSSFOG00015009739	tfb1m	97	67.930	ENSODEG00000005915	TFB1M	99	67.930	Octodon_degus
ENSSFOG00015009739	tfb1m	96	75.668	ENSONIG00000008109	tfb1m	97	75.668	Oreochromis_niloticus
ENSSFOG00015009739	tfb1m	95	69.789	ENSOCUG00000012154	TFB1M	97	69.789	Oryctolagus_cuniculus
ENSSFOG00015009739	tfb1m	96	76.488	ENSORLG00000017328	tfb1m	82	76.488	Oryzias_latipes
ENSSFOG00015009739	tfb1m	96	76.558	ENSORLG00020002250	tfb1m	98	76.558	Oryzias_latipes_hni
ENSSFOG00015009739	tfb1m	96	76.190	ENSORLG00015016067	tfb1m	98	76.190	Oryzias_latipes_hsok
ENSSFOG00015009739	tfb1m	99	75.358	ENSOMEG00000015641	tfb1m	99	75.358	Oryzias_melastigma
ENSSFOG00015009739	tfb1m	99	67.241	ENSOGAG00000011681	TFB1M	99	67.241	Otolemur_garnettii
ENSSFOG00015009739	tfb1m	95	69.118	ENSOARG00000004216	TFB1M	100	69.118	Ovis_aries
ENSSFOG00015009739	tfb1m	99	67.919	ENSPPAG00000030834	TFB1M	99	67.919	Pan_paniscus
ENSSFOG00015009739	tfb1m	94	70.000	ENSPPRG00000013578	TFB1M	96	70.000	Panthera_pardus
ENSSFOG00015009739	tfb1m	94	70.000	ENSPTIG00000003540	TFB1M	96	70.000	Panthera_tigris_altaica
ENSSFOG00015009739	tfb1m	99	67.630	ENSPTRG00000018730	TFB1M	99	67.630	Pan_troglodytes
ENSSFOG00015009739	tfb1m	94	70.303	ENSPANG00000007489	TFB1M	96	70.303	Papio_anubis
ENSSFOG00015009739	tfb1m	99	81.897	ENSPKIG00000021117	tfb1m	99	81.897	Paramormyrops_kingsleyae
ENSSFOG00015009739	tfb1m	95	71.772	ENSPSIG00000006643	TFB1M	97	71.772	Pelodiscus_sinensis
ENSSFOG00015009739	tfb1m	96	73.433	ENSPMGG00000011289	tfb1m	96	73.433	Periophthalmus_magnuspinnatus
ENSSFOG00015009739	tfb1m	95	69.184	ENSPEMG00000010410	Tfb1m	96	69.184	Peromyscus_maniculatus_bairdii
ENSSFOG00015009739	tfb1m	56	64.286	ENSPMAG00000008056	tfb1m	97	60.829	Petromyzon_marinus
ENSSFOG00015009739	tfb1m	94	70.000	ENSPCIG00000001010	TFB1M	92	70.000	Phascolarctos_cinereus
ENSSFOG00015009739	tfb1m	96	72.566	ENSPFOG00000005139	tfb1m	96	72.566	Poecilia_formosa
ENSSFOG00015009739	tfb1m	96	72.997	ENSPLAG00000021410	tfb1m	96	72.997	Poecilia_latipinna
ENSSFOG00015009739	tfb1m	96	72.700	ENSPMEG00000020166	tfb1m	96	72.700	Poecilia_mexicana
ENSSFOG00015009739	tfb1m	96	72.997	ENSPREG00000022392	tfb1m	96	72.997	Poecilia_reticulata
ENSSFOG00015009739	tfb1m	99	65.994	ENSPPYG00000017123	TFB1M	99	65.994	Pongo_abelii
ENSSFOG00015009739	tfb1m	81	56.842	ENSPCAG00000007078	TFB1M	95	56.842	Procavia_capensis
ENSSFOG00015009739	tfb1m	99	69.341	ENSPCOG00000028453	TFB1M	99	69.341	Propithecus_coquereli
ENSSFOG00015009739	tfb1m	97	69.208	ENSPVAG00000015818	TFB1M	99	69.208	Pteropus_vampyrus
ENSSFOG00015009739	tfb1m	99	74.493	ENSPNYG00000007330	tfb1m	96	74.493	Pundamilia_nyererei
ENSSFOG00015009739	tfb1m	97	75.953	ENSPNAG00000007507	tfb1m	97	75.953	Pygocentrus_nattereri
ENSSFOG00015009739	tfb1m	57	30.693	ENSPNAG00000019212	dimt1l	60	30.693	Pygocentrus_nattereri
ENSSFOG00015009739	tfb1m	99	67.429	ENSRNOG00000056223	Tfb1m	99	67.429	Rattus_norvegicus
ENSSFOG00015009739	tfb1m	94	70.606	ENSRBIG00000039975	TFB1M	98	70.606	Rhinopithecus_bieti
ENSSFOG00015009739	tfb1m	94	70.303	ENSRROG00000033802	TFB1M	98	70.303	Rhinopithecus_roxellana
ENSSFOG00015009739	tfb1m	99	68.300	ENSSBOG00000008663	TFB1M	99	68.300	Saimiri_boliviensis_boliviensis
ENSSFOG00015009739	tfb1m	97	59.292	ENSSHAG00000013259	TFB1M	98	59.292	Sarcophilus_harrisii
ENSSFOG00015009739	tfb1m	96	75.371	ENSSMAG00000008229	tfb1m	95	75.371	Scophthalmus_maximus
ENSSFOG00015009739	tfb1m	99	72.126	ENSSDUG00000011871	tfb1m	96	72.126	Seriola_dumerili
ENSSFOG00015009739	tfb1m	99	72.989	ENSSLDG00000023923	tfb1m	96	72.989	Seriola_lalandi_dorsalis
ENSSFOG00015009739	tfb1m	63	72.072	ENSSARG00000003159	TFB1M	100	72.072	Sorex_araneus
ENSSFOG00015009739	tfb1m	97	69.822	ENSSPUG00000015253	TFB1M	98	69.822	Sphenodon_punctatus
ENSSFOG00015009739	tfb1m	57	30.693	ENSSPUG00000018021	DIMT1	58	30.693	Sphenodon_punctatus
ENSSFOG00015009739	tfb1m	96	74.777	ENSSPAG00000019515	tfb1m	94	74.777	Stegastes_partitus
ENSSFOG00015009739	tfb1m	96	69.345	ENSSSCG00000024361	TFB1M	99	69.345	Sus_scrofa
ENSSFOG00015009739	tfb1m	94	69.697	ENSTGUG00000011136	TFB1M	95	69.697	Taeniopygia_guttata
ENSSFOG00015009739	tfb1m	96	72.700	ENSTRUG00000020334	tfb1m	95	72.700	Takifugu_rubripes
ENSSFOG00015009739	tfb1m	63	76.818	ENSTNIG00000016882	tfb1m	97	76.818	Tetraodon_nigroviridis
ENSSFOG00015009739	tfb1m	94	68.788	ENSTBEG00000008769	TFB1M	99	66.762	Tupaia_belangeri
ENSSFOG00015009739	tfb1m	97	69.527	ENSTTRG00000006327	TFB1M	99	69.527	Tursiops_truncatus
ENSSFOG00015009739	tfb1m	99	66.667	ENSUAMG00000017802	TFB1M	100	66.667	Ursus_americanus
ENSSFOG00015009739	tfb1m	99	67.236	ENSUMAG00000013377	TFB1M	92	67.236	Ursus_maritimus
ENSSFOG00015009739	tfb1m	95	69.578	ENSVPAG00000010148	TFB1M	98	69.578	Vicugna_pacos
ENSSFOG00015009739	tfb1m	94	70.303	ENSVVUG00000007643	TFB1M	96	70.303	Vulpes_vulpes
ENSSFOG00015009739	tfb1m	98	69.186	ENSXETG00000007852	tfb1m	99	69.186	Xenopus_tropicalis
ENSSFOG00015009739	tfb1m	96	72.997	ENSXCOG00000013230	tfb1m	96	72.997	Xiphophorus_couchianus
ENSSFOG00015009739	tfb1m	96	72.997	ENSXMAG00000019222	tfb1m	96	72.997	Xiphophorus_maculatus