EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015009840 (Gene tree)
Gene ID: 108932730
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC108932730
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 3415 bases
Position: chrKV411003.1:3312550-3315964
Accession: 108932730
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015015279	RVT_1	PF00078.27	8.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015015460	-	3415	XM_018749297	ENSSFOP00015015279	1040 (aa)	XP_018604813	A0A1W4ZVB1

Gene Model

Click here to download ENSSFOG00015009840's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015009840's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015009840	-	82	99.647	ENSSFOG00015018491	-	93	99.647
ENSSFOG00015009840	-	86	100.000	ENSSFOG00015000041	-	93	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015009840	-	72	40.921	ENSACLG00000020851	-	99	40.921	Astatotilapia_calliptera
ENSSFOG00015009840	-	84	40.519	ENSAMXG00000030324	-	82	40.519	Astyanax_mexicanus
ENSSFOG00015009840	-	94	42.655	ENSAMXG00000039541	-	85	42.655	Astyanax_mexicanus
ENSSFOG00015009840	-	99	63.346	ENSAMXG00000034228	-	87	63.540	Astyanax_mexicanus
ENSSFOG00015009840	-	96	53.247	ENSAMXG00000035203	-	89	53.247	Astyanax_mexicanus
ENSSFOG00015009840	-	91	38.349	ENSMZEG00005018493	-	85	38.349	Maylandia_zebra
ENSSFOG00015009840	-	61	58.842	ENSORLG00015002388	-	80	58.842	Oryzias_latipes_hsok
ENSSFOG00015009840	-	75	56.401	ENSOMEG00000023989	-	86	56.401	Oryzias_melastigma
ENSSFOG00015009840	-	82	43.655	ENSSLDG00000012549	-	82	43.757	Seriola_lalandi_dorsalis
ENSSFOG00015009840	-	92	40.041	ENSTNIG00000000569	-	88	39.455	Tetraodon_nigroviridis