EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015009892 (Gene tree)
Gene ID: 108937796
Gene Symbol: rbm17
Alias: zgc:55840
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 6065 bases
Position: chrKV411147.1:39112-45176
Accession: 108937796
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015015405	RRM_1	PF00076.22	5.4e-05	1	1
ENSSFOP00015015392	RRM_1	PF00076.22	6.1e-05	1	1
ENSSFOP00015015405	G-patch	PF01585.23	7.9e-13	1	1
ENSSFOP00015015392	G-patch	PF01585.23	8.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015015574	-	1458	XM_018757955	ENSSFOP00015015392	422 (aa)	XP_018613471	A0A1W5AKU6
ENSSFOT00015015587	-	1221	-	ENSSFOP00015015405	406 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015009892's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015009892's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015009892	rbm17	100	82.555	ENSG00000134453	RBM17	100	82.555	Homo_sapiens
ENSSFOG00015009892	rbm17	99	85.185	ENSAPOG00000007101	rbm17	99	83.704	Acanthochromis_polyacanthus
ENSSFOG00015009892	rbm17	100	83.047	ENSAMEG00000002107	RBM17	100	83.047	Ailuropoda_melanoleuca
ENSSFOG00015009892	rbm17	100	79.756	ENSACIG00000006251	rbm17	100	79.756	Amphilophus_citrinellus
ENSSFOG00015009892	rbm17	100	85.086	ENSAOCG00000014892	rbm17	100	83.619	Amphiprion_ocellaris
ENSSFOG00015009892	rbm17	100	85.086	ENSAPEG00000022779	rbm17	100	83.619	Amphiprion_percula
ENSSFOG00015009892	rbm17	100	82.629	ENSATEG00000004406	rbm17	100	82.160	Anabas_testudineus
ENSSFOG00015009892	rbm17	100	83.292	ENSAPLG00000004190	RBM17	100	83.292	Anas_platyrhynchos
ENSSFOG00015009892	rbm17	90	77.067	ENSACAG00000005418	RBM17	99	77.067	Anolis_carolinensis
ENSSFOG00015009892	rbm17	100	71.990	ENSANAG00000019330	-	97	83.193	Aotus_nancymaae
ENSSFOG00015009892	rbm17	100	82.555	ENSANAG00000030127	RBM17	95	88.136	Aotus_nancymaae
ENSSFOG00015009892	rbm17	100	78.431	ENSACLG00000003928	rbm17	100	78.431	Astatotilapia_calliptera
ENSSFOG00015009892	rbm17	100	83.099	ENSAMXG00000005853	rbm17	100	83.099	Astyanax_mexicanus
ENSSFOG00015009892	rbm17	100	81.327	ENSBTAG00000011094	-	100	81.327	Bos_taurus
ENSSFOG00015009892	rbm17	100	82.555	ENSBTAG00000021951	RBM17	100	82.555	Bos_taurus
ENSSFOG00015009892	rbm17	74	34.098	WBGene00010233	F58B3.7	91	32.134	Caenorhabditis_elegans
ENSSFOG00015009892	rbm17	100	82.555	ENSCJAG00000020573	RBM17	100	82.555	Callithrix_jacchus
ENSSFOG00015009892	rbm17	100	83.047	ENSCAFG00000005206	RBM17	100	83.047	Canis_familiaris
ENSSFOG00015009892	rbm17	100	77.641	ENSCAFG00020005420	RBM17	100	77.641	Canis_lupus_dingo
ENSSFOG00015009892	rbm17	100	82.555	ENSCHIG00000023204	-	100	82.555	Capra_hircus
ENSSFOG00015009892	rbm17	100	80.344	ENSCHIG00000019921	-	100	80.344	Capra_hircus
ENSSFOG00015009892	rbm17	100	81.463	ENSTSYG00000001165	RBM17	99	87.288	Carlito_syrichta
ENSSFOG00015009892	rbm17	90	64.879	ENSCAPG00000006275	RBM17	100	64.286	Cavia_aperea
ENSSFOG00015009892	rbm17	100	76.942	ENSCPOG00000005679	RBM17	100	76.942	Cavia_porcellus
ENSSFOG00015009892	rbm17	100	82.555	ENSCCAG00000018655	RBM17	95	88.136	Cebus_capucinus
ENSSFOG00015009892	rbm17	100	82.555	ENSCATG00000041566	RBM17	96	87.395	Cercocebus_atys
ENSSFOG00015009892	rbm17	100	82.195	ENSCLAG00000012195	RBM17	99	82.195	Chinchilla_lanigera
ENSSFOG00015009892	rbm17	100	82.555	ENSCSAG00000013564	RBM17	100	82.555	Chlorocebus_sabaeus
ENSSFOG00015009892	rbm17	92	65.957	ENSCHOG00000005131	RBM17	100	65.957	Choloepus_hoffmanni
ENSSFOG00015009892	rbm17	100	82.310	ENSCPBG00000019836	RBM17	100	82.310	Chrysemys_picta_bellii
ENSSFOG00015009892	rbm17	100	46.651	ENSCSAVG00000008782	-	100	46.394	Ciona_savignyi
ENSSFOG00015009892	rbm17	100	82.310	ENSCANG00000030987	RBM17	96	87.395	Colobus_angolensis_palliatus
ENSSFOG00015009892	rbm17	98	72.111	ENSCANG00000023715	-	100	72.111	Colobus_angolensis_palliatus
ENSSFOG00015009892	rbm17	100	82.195	ENSCGRG00001013842	Rbm17	100	82.195	Cricetulus_griseus_chok1gshd
ENSSFOG00015009892	rbm17	100	63.659	ENSCGRG00001009256	-	100	62.927	Cricetulus_griseus_chok1gshd
ENSSFOG00015009892	rbm17	100	82.195	ENSCGRG00000006907	Rbm17	100	82.195	Cricetulus_griseus_crigri
ENSSFOG00015009892	rbm17	100	79.951	ENSCSEG00000018164	rbm17	100	78.973	Cynoglossus_semilaevis
ENSSFOG00015009892	rbm17	100	77.451	ENSCVAG00000002476	rbm17	100	77.451	Cyprinodon_variegatus
ENSSFOG00015009892	rbm17	100	77.934	ENSDARG00000031346	rbm17	100	80.751	Danio_rerio
ENSSFOG00015009892	rbm17	100	82.310	ENSDNOG00000035920	RBM17	100	82.310	Dasypus_novemcinctus
ENSSFOG00015009892	rbm17	99	37.310	FBgn0086683	Spf45	99	36.946	Drosophila_melanogaster
ENSSFOG00015009892	rbm17	86	83.178	ENSETEG00000006642	RBM17	87	83.178	Echinops_telfairi
ENSSFOG00015009892	rbm17	64	63.131	ENSEBUG00000010253	rbm17	85	63.131	Eptatretus_burgeri
ENSSFOG00015009892	rbm17	93	78.989	ENSEASG00005009236	-	100	78.989	Equus_asinus_asinus
ENSSFOG00015009892	rbm17	100	75.912	ENSEASG00005019205	-	100	75.240	Equus_asinus_asinus
ENSSFOG00015009892	rbm17	100	70.025	ENSECAG00000008939	RBM17	100	69.492	Equus_caballus
ENSSFOG00015009892	rbm17	100	73.219	ENSECAG00000001379	-	100	73.219	Equus_caballus
ENSSFOG00015009892	rbm17	86	66.476	ENSEEUG00000013077	RBM17	100	66.476	Erinaceus_europaeus
ENSSFOG00015009892	rbm17	100	79.080	ENSELUG00000006440	rbm17	100	79.032	Esox_lucius
ENSSFOG00015009892	rbm17	100	83.047	ENSFCAG00000031988	RBM17	100	83.047	Felis_catus
ENSSFOG00015009892	rbm17	100	82.310	ENSFALG00000001790	RBM17	100	82.310	Ficedula_albicollis
ENSSFOG00015009892	rbm17	100	82.195	ENSFDAG00000007470	RBM17	100	82.195	Fukomys_damarensis
ENSSFOG00015009892	rbm17	100	79.108	ENSFHEG00000001266	rbm17	100	78.729	Fundulus_heteroclitus
ENSSFOG00015009892	rbm17	99	76.123	ENSGMOG00000008438	rbm17	100	75.650	Gadus_morhua
ENSSFOG00015009892	rbm17	100	83.292	ENSGALG00000006332	RBM17	100	83.292	Gallus_gallus
ENSSFOG00015009892	rbm17	100	81.373	ENSGAFG00000019879	rbm17	100	81.373	Gambusia_affinis
ENSSFOG00015009892	rbm17	99	81.373	ENSGACG00000019174	rbm17	99	80.882	Gasterosteus_aculeatus
ENSSFOG00015009892	rbm17	100	82.310	ENSGAGG00000019906	RBM17	100	82.310	Gopherus_agassizii
ENSSFOG00015009892	rbm17	100	83.863	ENSHBUG00000016624	rbm17	100	82.396	Haplochromis_burtoni
ENSSFOG00015009892	rbm17	100	82.195	ENSHGLG00000011580	RBM17	100	82.195	Heterocephalus_glaber_female
ENSSFOG00015009892	rbm17	100	66.015	ENSHGLG00100010556	-	100	63.570	Heterocephalus_glaber_male
ENSSFOG00015009892	rbm17	100	82.195	ENSHGLG00100010460	RBM17	100	82.195	Heterocephalus_glaber_male
ENSSFOG00015009892	rbm17	99	80.189	ENSHCOG00000010865	rbm17	100	79.481	Hippocampus_comes
ENSSFOG00015009892	rbm17	100	78.555	ENSIPUG00000007699	Rbm17	100	84.149	Ictalurus_punctatus
ENSSFOG00015009892	rbm17	100	82.195	ENSSTOG00000013591	RBM17	100	82.195	Ictidomys_tridecemlineatus
ENSSFOG00015009892	rbm17	100	82.195	ENSJJAG00000022886	Rbm17	100	82.195	Jaculus_jaculus
ENSSFOG00015009892	rbm17	100	59.852	ENSJJAG00000000993	-	100	57.108	Jaculus_jaculus
ENSSFOG00015009892	rbm17	100	79.059	ENSKMAG00000021400	rbm17	100	79.059	Kryptolebias_marmoratus
ENSSFOG00015009892	rbm17	100	84.108	ENSLBEG00000000881	rbm17	100	81.690	Labrus_bergylta
ENSSFOG00015009892	rbm17	99	68.150	ENSLACG00000017297	RBM17	99	68.150	Latimeria_chalumnae
ENSSFOG00015009892	rbm17	100	85.749	ENSLOCG00000015659	rbm17	100	85.749	Lepisosteus_oculatus
ENSSFOG00015009892	rbm17	100	81.553	ENSLAFG00000011629	RBM17	100	81.553	Loxodonta_africana
ENSSFOG00015009892	rbm17	100	82.555	ENSMFAG00000035521	RBM17	96	87.395	Macaca_fascicularis
ENSSFOG00015009892	rbm17	100	82.555	ENSMMUG00000015152	RBM17	96	87.395	Macaca_mulatta
ENSSFOG00015009892	rbm17	100	82.555	ENSMNEG00000017264	RBM17	96	87.395	Macaca_nemestrina
ENSSFOG00015009892	rbm17	100	82.555	ENSMLEG00000029340	RBM17	96	87.395	Mandrillus_leucophaeus
ENSSFOG00015009892	rbm17	100	80.000	ENSMAMG00000000387	rbm17	100	80.986	Mastacembelus_armatus
ENSSFOG00015009892	rbm17	100	82.201	ENSMZEG00005015179	rbm17	100	80.796	Maylandia_zebra
ENSSFOG00015009892	rbm17	100	82.567	ENSMGAG00000003981	RBM17	100	82.567	Meleagris_gallopavo
ENSSFOG00015009892	rbm17	100	82.195	ENSMAUG00000019247	Rbm17	100	82.195	Mesocricetus_auratus
ENSSFOG00015009892	rbm17	100	81.951	ENSMICG00000003976	-	100	81.951	Microcebus_murinus
ENSSFOG00015009892	rbm17	100	75.845	ENSMICG00000041489	-	100	75.845	Microcebus_murinus
ENSSFOG00015009892	rbm17	100	82.195	ENSMOCG00000011847	Rbm17	100	82.195	Microtus_ochrogaster
ENSSFOG00015009892	rbm17	93	66.053	ENSMOCG00000014517	-	99	66.053	Microtus_ochrogaster
ENSSFOG00015009892	rbm17	100	76.087	ENSMMOG00000010264	rbm17	100	73.188	Mola_mola
ENSSFOG00015009892	rbm17	100	82.555	ENSMODG00000016648	RBM17	100	82.555	Monodelphis_domestica
ENSSFOG00015009892	rbm17	100	81.265	ENSMALG00000010597	rbm17	100	81.265	Monopterus_albus
ENSSFOG00015009892	rbm17	100	82.195	MGP_CAROLIEiJ_G0023173	Rbm17	100	82.195	Mus_caroli
ENSSFOG00015009892	rbm17	100	82.195	ENSMUSG00000037197	Rbm17	100	82.195	Mus_musculus
ENSSFOG00015009892	rbm17	100	81.951	MGP_PahariEiJ_G0019233	Rbm17	100	81.951	Mus_pahari
ENSSFOG00015009892	rbm17	100	82.195	MGP_SPRETEiJ_G0024091	Rbm17	100	82.195	Mus_spretus
ENSSFOG00015009892	rbm17	86	81.534	ENSMPUG00000016359	RBM17	97	81.534	Mustela_putorius_furo
ENSSFOG00015009892	rbm17	100	80.779	ENSMLUG00000002302	-	100	80.779	Myotis_lucifugus
ENSSFOG00015009892	rbm17	100	80.098	ENSMLUG00000025709	-	100	78.870	Myotis_lucifugus
ENSSFOG00015009892	rbm17	100	82.195	ENSNGAG00000000741	Rbm17	100	82.195	Nannospalax_galili
ENSSFOG00015009892	rbm17	100	56.373	ENSNGAG00000000663	-	100	57.248	Nannospalax_galili
ENSSFOG00015009892	rbm17	100	76.225	ENSNBRG00000018148	rbm17	100	76.961	Neolamprologus_brichardi
ENSSFOG00015009892	rbm17	100	82.555	ENSNLEG00000033350	RBM17	96	87.395	Nomascus_leucogenys
ENSSFOG00015009892	rbm17	100	77.150	ENSMEUG00000011347	RBM17	100	77.150	Notamacropus_eugenii
ENSSFOG00015009892	rbm17	100	72.236	ENSOPRG00000002993	RBM17	100	71.990	Ochotona_princeps
ENSSFOG00015009892	rbm17	100	81.752	ENSODEG00000004393	RBM17	100	81.752	Octodon_degus
ENSSFOG00015009892	rbm17	97	63.636	ENSODEG00000007286	-	99	63.636	Octodon_degus
ENSSFOG00015009892	rbm17	100	84.352	ENSONIG00000011838	rbm17	100	82.885	Oreochromis_niloticus
ENSSFOG00015009892	rbm17	100	81.618	ENSOANG00000015455	RBM17	100	81.618	Ornithorhynchus_anatinus
ENSSFOG00015009892	rbm17	100	81.265	ENSORLG00000028798	rbm17	100	80.328	Oryzias_latipes
ENSSFOG00015009892	rbm17	100	80.751	ENSORLG00020004593	rbm17	100	78.186	Oryzias_latipes_hni
ENSSFOG00015009892	rbm17	100	83.130	ENSORLG00015000033	rbm17	100	82.152	Oryzias_latipes_hsok
ENSSFOG00015009892	rbm17	100	80.796	ENSOMEG00000012060	rbm17	100	86.250	Oryzias_melastigma
ENSSFOG00015009892	rbm17	100	82.439	ENSOGAG00000015687	RBM17	100	82.439	Otolemur_garnettii
ENSSFOG00015009892	rbm17	100	82.555	ENSOARG00000012975	RBM17	100	82.555	Ovis_aries
ENSSFOG00015009892	rbm17	100	82.555	ENSPPAG00000032347	RBM17	96	87.395	Pan_paniscus
ENSSFOG00015009892	rbm17	100	83.047	ENSPPRG00000010706	RBM17	100	83.047	Panthera_pardus
ENSSFOG00015009892	rbm17	100	83.047	ENSPTIG00000007596	RBM17	100	83.047	Panthera_tigris_altaica
ENSSFOG00015009892	rbm17	100	82.555	ENSPTRG00000002265	RBM17	96	87.395	Pan_troglodytes
ENSSFOG00015009892	rbm17	100	82.555	ENSPANG00000023425	RBM17	96	87.395	Papio_anubis
ENSSFOG00015009892	rbm17	100	84.235	ENSPKIG00000025526	rbm17	100	84.038	Paramormyrops_kingsleyae
ENSSFOG00015009892	rbm17	100	85.211	ENSPKIG00000005048	-	100	85.211	Paramormyrops_kingsleyae
ENSSFOG00015009892	rbm17	100	80.976	ENSPSIG00000012332	RBM17	100	80.976	Pelodiscus_sinensis
ENSSFOG00015009892	rbm17	100	77.751	ENSPMGG00000007980	rbm17	100	77.995	Periophthalmus_magnuspinnatus
ENSSFOG00015009892	rbm17	100	82.195	ENSPEMG00000014320	Rbm17	100	82.195	Peromyscus_maniculatus_bairdii
ENSSFOG00015009892	rbm17	100	82.152	ENSPCIG00000019260	-	100	82.152	Phascolarctos_cinereus
ENSSFOG00015009892	rbm17	100	79.765	ENSPFOG00000013271	rbm17	100	80.471	Poecilia_formosa
ENSSFOG00015009892	rbm17	100	80.000	ENSPLAG00000004455	rbm17	100	80.706	Poecilia_latipinna
ENSSFOG00015009892	rbm17	100	81.618	ENSPMEG00000014864	rbm17	100	82.353	Poecilia_mexicana
ENSSFOG00015009892	rbm17	100	79.294	ENSPREG00000015589	rbm17	100	79.294	Poecilia_reticulata
ENSSFOG00015009892	rbm17	81	60.486	ENSPPYG00000019042	-	100	59.271	Pongo_abelii
ENSSFOG00015009892	rbm17	99	63.300	ENSPPYG00000019881	-	100	61.975	Pongo_abelii
ENSSFOG00015009892	rbm17	100	82.555	ENSPPYG00000002067	RBM17	100	82.555	Pongo_abelii
ENSSFOG00015009892	rbm17	100	75.184	ENSPCAG00000016879	RBM17	100	75.184	Procavia_capensis
ENSSFOG00015009892	rbm17	100	82.801	ENSPCOG00000027881	RBM17	100	82.801	Propithecus_coquereli
ENSSFOG00015009892	rbm17	100	75.676	ENSPVAG00000015499	RBM17	100	74.693	Pteropus_vampyrus
ENSSFOG00015009892	rbm17	100	74.510	ENSPNYG00000015274	rbm17	100	74.696	Pundamilia_nyererei
ENSSFOG00015009892	rbm17	100	83.803	ENSPNAG00000030046	rbm17	100	83.803	Pygocentrus_nattereri
ENSSFOG00015009892	rbm17	100	82.195	ENSRNOG00000018767	Rbm17	100	82.195	Rattus_norvegicus
ENSSFOG00015009892	rbm17	100	82.555	ENSRBIG00000043727	RBM17	96	87.395	Rhinopithecus_bieti
ENSSFOG00015009892	rbm17	100	82.555	ENSRROG00000044142	RBM17	96	87.395	Rhinopithecus_roxellana
ENSSFOG00015009892	rbm17	100	82.310	ENSSBOG00000031661	-	100	82.310	Saimiri_boliviensis_boliviensis
ENSSFOG00015009892	rbm17	100	72.482	ENSSBOG00000023653	-	100	71.499	Saimiri_boliviensis_boliviensis
ENSSFOG00015009892	rbm17	100	82.555	ENSSHAG00000012480	-	100	82.555	Sarcophilus_harrisii
ENSSFOG00015009892	rbm17	100	79.032	ENSSMAG00000012368	rbm17	100	79.032	Scophthalmus_maximus
ENSSFOG00015009892	rbm17	100	81.710	ENSSDUG00000015015	rbm17	100	83.333	Seriola_dumerili
ENSSFOG00015009892	rbm17	100	81.710	ENSSLDG00000014486	rbm17	100	83.333	Seriola_lalandi_dorsalis
ENSSFOG00015009892	rbm17	61	60.853	ENSSARG00000001792	-	100	64.876	Sorex_araneus
ENSSFOG00015009892	rbm17	99	81.527	ENSSPUG00000001036	RBM17	99	81.527	Sphenodon_punctatus
ENSSFOG00015009892	rbm17	100	84.597	ENSSPAG00000002338	rbm17	100	83.130	Stegastes_partitus
ENSSFOG00015009892	rbm17	100	82.801	ENSSSCG00000011134	RBM17	100	82.801	Sus_scrofa
ENSSFOG00015009892	rbm17	100	81.707	ENSTGUG00000002013	RBM17	100	81.707	Taeniopygia_guttata
ENSSFOG00015009892	rbm17	100	83.088	ENSTRUG00000010698	rbm17	100	82.598	Takifugu_rubripes
ENSSFOG00015009892	rbm17	100	83.455	ENSTNIG00000006892	rbm17	100	82.968	Tetraodon_nigroviridis
ENSSFOG00015009892	rbm17	100	62.408	ENSTBEG00000014686	RBM17	100	62.408	Tupaia_belangeri
ENSSFOG00015009892	rbm17	90	80.874	ENSTTRG00000001344	RBM17	100	80.874	Tursiops_truncatus
ENSSFOG00015009892	rbm17	100	77.396	ENSUAMG00000009499	RBM17	100	77.396	Ursus_americanus
ENSSFOG00015009892	rbm17	100	83.047	ENSUMAG00000012237	RBM17	100	83.047	Ursus_maritimus
ENSSFOG00015009892	rbm17	100	72.482	ENSVPAG00000005497	RBM17	100	72.482	Vicugna_pacos
ENSSFOG00015009892	rbm17	100	77.641	ENSVVUG00000006780	RBM17	97	81.303	Vulpes_vulpes
ENSSFOG00015009892	rbm17	99	80.494	ENSXETG00000018123	rbm17	100	80.494	Xenopus_tropicalis
ENSSFOG00015009892	rbm17	100	82.108	ENSXMAG00000008674	rbm17	100	82.108	Xiphophorus_maculatus