EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015009921 (Gene tree)
Gene ID: 108939883
Gene Symbol: -
Alias: -
Full Name: transcription activator BRG1-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 20153 bases
Position: chrKV411197.1:10029112-10049264
Accession: 108939883
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015015493	ResIII	PF04851.15	8.5e-09	1	1
ENSSFOP00015015493	BRK	PF07533.16	6.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015015675	-	4797	XM_018761537	ENSSFOP00015015493	1598 (aa)	XP_018617053	-

Gene Model

Click here to download ENSSFOG00015009921's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015009921's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015009921	-	96	87.775	ENSSFOG00015013823	smarca4	96	87.611
ENSSFOG00015009921	-	89	71.310	ENSSFOG00015014870	SMARCA2	94	72.068

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015009921	-	91	90.868	ENSG00000127616	SMARCA4	99	100.000	Homo_sapiens
ENSSFOG00015009921	-	89	91.342	ENSAPOG00000004542	SMARCA4	96	84.848	Acanthochromis_polyacanthus
ENSSFOG00015009921	-	77	88.151	ENSAPOG00000003509	smarca4a	98	87.460	Acanthochromis_polyacanthus
ENSSFOG00015009921	-	91	85.621	ENSAMEG00000010868	SMARCA4	96	77.176	Ailuropoda_melanoleuca
ENSSFOG00015009921	-	94	91.139	ENSACIG00000021550	smarca4a	95	84.895	Amphilophus_citrinellus
ENSSFOG00015009921	-	86	92.616	ENSACIG00000003035	-	93	84.783	Amphilophus_citrinellus
ENSSFOG00015009921	-	88	91.860	ENSAOCG00000009450	-	94	86.115	Amphiprion_ocellaris
ENSSFOG00015009921	-	82	91.544	ENSAOCG00000019167	smarca4a	96	81.519	Amphiprion_ocellaris
ENSSFOG00015009921	-	91	89.067	ENSAPEG00000023108	-	94	82.544	Amphiprion_percula
ENSSFOG00015009921	-	82	91.631	ENSAPEG00000015559	smarca4a	96	81.590	Amphiprion_percula
ENSSFOG00015009921	-	94	90.916	ENSATEG00000001094	-	95	83.455	Anabas_testudineus
ENSSFOG00015009921	-	97	85.225	ENSATEG00000011524	smarca4a	96	84.669	Anabas_testudineus
ENSSFOG00015009921	-	91	90.653	ENSANAG00000036991	SMARCA4	96	81.309	Aotus_nancymaae
ENSSFOG00015009921	-	95	90.233	ENSACLG00000000163	smarca4a	96	85.487	Astatotilapia_calliptera
ENSSFOG00015009921	-	92	84.386	ENSACLG00000008638	-	94	84.203	Astatotilapia_calliptera
ENSSFOG00015009921	-	94	86.088	ENSAMXG00000011238	-	95	91.213	Astyanax_mexicanus
ENSSFOG00015009921	-	96	84.651	ENSAMXG00000021023	smarca4a	95	81.603	Astyanax_mexicanus
ENSSFOG00015009921	-	91	91.020	ENSBTAG00000019220	SMARCA4	96	81.397	Bos_taurus
ENSSFOG00015009921	-	91	86.512	ENSCJAG00000005936	SMARCA4	91	85.531	Callithrix_jacchus
ENSSFOG00015009921	-	91	90.868	ENSCAFG00000017584	SMARCA4	91	90.359	Canis_familiaris
ENSSFOG00015009921	-	91	90.868	ENSCAFG00020024620	SMARCA4	90	90.359	Canis_lupus_dingo
ENSSFOG00015009921	-	97	81.198	ENSCHIG00000015318	SMARCA4	96	81.977	Capra_hircus
ENSSFOG00015009921	-	91	90.411	ENSTSYG00000012966	SMARCA4	91	90.157	Carlito_syrichta
ENSSFOG00015009921	-	92	80.000	ENSCAPG00000015932	SMARCA4	88	90.336	Cavia_aperea
ENSSFOG00015009921	-	91	91.172	ENSCPOG00000015549	SMARCA4	91	90.658	Cavia_porcellus
ENSSFOG00015009921	-	91	86.491	ENSCCAG00000031660	SMARCA4	95	79.899	Cebus_capucinus
ENSSFOG00015009921	-	91	90.868	ENSCATG00000029530	SMARCA4	91	90.359	Cercocebus_atys
ENSSFOG00015009921	-	91	90.411	ENSCLAG00000011946	SMARCA4	96	83.514	Chinchilla_lanigera
ENSSFOG00015009921	-	93	90.971	ENSCPBG00000009994	SMARCA4	96	82.383	Chrysemys_picta_bellii
ENSSFOG00015009921	-	93	91.882	ENSCANG00000036013	SMARCA4	91	90.284	Colobus_angolensis_palliatus
ENSSFOG00015009921	-	91	90.868	ENSCGRG00001016732	Smarca4	91	90.359	Cricetulus_griseus_chok1gshd
ENSSFOG00015009921	-	91	90.868	ENSCGRG00000017242	Smarca4	91	90.359	Cricetulus_griseus_crigri
ENSSFOG00015009921	-	96	83.761	ENSCSEG00000014771	smarca4a	96	83.344	Cynoglossus_semilaevis
ENSSFOG00015009921	-	97	82.925	ENSCVAG00000006979	smarca4a	96	83.908	Cyprinodon_variegatus
ENSSFOG00015009921	-	92	88.589	ENSCVAG00000003018	-	89	88.956	Cyprinodon_variegatus
ENSSFOG00015009921	-	92	84.211	ENSDARG00000104339	SMARCA4	90	91.686	Danio_rerio
ENSSFOG00015009921	-	95	85.045	ENSDARG00000077226	smarca4a	96	83.396	Danio_rerio
ENSSFOG00015009921	-	93	83.333	ENSDNOG00000048847	SMARCA4	90	90.977	Dasypus_novemcinctus
ENSSFOG00015009921	-	78	87.306	ENSDORG00000002544	Smarca4	82	87.671	Dipodomys_ordii
ENSSFOG00015009921	-	86	77.664	ENSETEG00000013361	SMARCA4	91	73.870	Echinops_telfairi
ENSSFOG00015009921	-	91	90.715	ENSEASG00005006167	SMARCA4	92	87.697	Equus_asinus_asinus
ENSSFOG00015009921	-	91	90.791	ENSECAG00000008334	SMARCA4	91	90.284	Equus_caballus
ENSSFOG00015009921	-	88	87.031	ENSELUG00000023232	-	98	78.585	Esox_lucius
ENSSFOG00015009921	-	93	91.629	ENSELUG00000010247	smarca4a	96	84.567	Esox_lucius
ENSSFOG00015009921	-	91	90.812	ENSFCAG00000004894	SMARCA4	91	90.306	Felis_catus
ENSSFOG00015009921	-	75	91.576	ENSFALG00000004208	SMARCA4	92	83.166	Ficedula_albicollis
ENSSFOG00015009921	-	84	90.924	ENSFDAG00000012237	SMARCA4	94	82.409	Fukomys_damarensis
ENSSFOG00015009921	-	92	89.837	ENSFHEG00000010182	smarca4a	91	89.903	Fundulus_heteroclitus
ENSSFOG00015009921	-	92	90.821	ENSFHEG00000007902	-	91	91.187	Fundulus_heteroclitus
ENSSFOG00015009921	-	91	82.222	ENSGMOG00000005756	-	90	81.314	Gadus_morhua
ENSSFOG00015009921	-	87	82.623	ENSGMOG00000002649	smarca4a	90	83.648	Gadus_morhua
ENSSFOG00015009921	-	66	91.425	ENSGALG00000047145	SMARCA4	96	78.448	Gallus_gallus
ENSSFOG00015009921	-	90	89.016	ENSGAFG00000008827	-	92	87.706	Gambusia_affinis
ENSSFOG00015009921	-	84	89.978	ENSGAFG00000014900	smarca4a	92	90.120	Gambusia_affinis
ENSSFOG00015009921	-	97	82.904	ENSGACG00000006691	smarca4a	96	82.543	Gasterosteus_aculeatus
ENSSFOG00015009921	-	83	84.482	ENSGACG00000016033	-	96	79.239	Gasterosteus_aculeatus
ENSSFOG00015009921	-	92	91.179	ENSGAGG00000016757	SMARCA4	96	82.540	Gopherus_agassizii
ENSSFOG00015009921	-	93	89.643	ENSGGOG00000009882	SMARCA4	91	90.359	Gorilla_gorilla
ENSSFOG00015009921	-	88	90.766	ENSHBUG00000005447	-	94	84.271	Haplochromis_burtoni
ENSSFOG00015009921	-	95	90.438	ENSHBUG00000021172	smarca4a	96	85.032	Haplochromis_burtoni
ENSSFOG00015009921	-	91	90.737	ENSHGLG00000010519	SMARCA4	91	90.231	Heterocephalus_glaber_female
ENSSFOG00015009921	-	91	90.137	ENSHGLG00100013774	SMARCA4	96	81.784	Heterocephalus_glaber_male
ENSSFOG00015009921	-	93	85.215	ENSHCOG00000009510	smarca4a	93	84.941	Hippocampus_comes
ENSSFOG00015009921	-	96	83.875	ENSIPUG00000006107	smarca4a	96	85.515	Ictalurus_punctatus
ENSSFOG00015009921	-	97	84.748	ENSIPUG00000016346	-	96	82.420	Ictalurus_punctatus
ENSSFOG00015009921	-	91	90.791	ENSSTOG00000007939	SMARCA4	91	90.284	Ictidomys_tridecemlineatus
ENSSFOG00015009921	-	91	88.122	ENSJJAG00000012877	Smarca4	91	87.527	Jaculus_jaculus
ENSSFOG00015009921	-	94	90.692	ENSKMAG00000011931	smarca4a	96	85.055	Kryptolebias_marmoratus
ENSSFOG00015009921	-	90	87.938	ENSLBEG00000017383	smarca4a	94	82.687	Labrus_bergylta
ENSSFOG00015009921	-	91	82.459	ENSLBEG00000020655	-	95	82.282	Labrus_bergylta
ENSSFOG00015009921	-	52	77.381	ENSLACG00000015309	SMARCA4	92	84.660	Latimeria_chalumnae
ENSSFOG00015009921	-	93	88.419	ENSLOCG00000007820	smarca4a	96	83.796	Lepisosteus_oculatus
ENSSFOG00015009921	-	91	90.737	ENSLAFG00000001433	SMARCA4	91	90.231	Loxodonta_africana
ENSSFOG00015009921	-	91	90.868	ENSMFAG00000032146	SMARCA4	90	90.359	Macaca_fascicularis
ENSSFOG00015009921	-	91	90.868	ENSMMUG00000012042	SMARCA4	98	90.315	Macaca_mulatta
ENSSFOG00015009921	-	93	92.089	ENSMNEG00000028512	SMARCA4	96	82.815	Macaca_nemestrina
ENSSFOG00015009921	-	93	91.882	ENSMLEG00000034976	SMARCA4	91	90.157	Mandrillus_leucophaeus
ENSSFOG00015009921	-	94	91.071	ENSMAMG00000009256	smarca4a	96	84.713	Mastacembelus_armatus
ENSSFOG00015009921	-	94	91.159	ENSMZEG00005003889	smarca4a	96	85.442	Maylandia_zebra
ENSSFOG00015009921	-	87	91.322	ENSMZEG00005023861	-	94	82.745	Maylandia_zebra
ENSSFOG00015009921	-	91	90.661	ENSMAUG00000020731	Smarca4	96	81.049	Mesocricetus_auratus
ENSSFOG00015009921	-	91	90.661	ENSMICG00000009806	SMARCA4	91	90.157	Microcebus_murinus
ENSSFOG00015009921	-	91	90.585	ENSMOCG00000022209	Smarca4	96	81.112	Microtus_ochrogaster
ENSSFOG00015009921	-	90	89.626	ENSMMOG00000007571	smarca4a	95	83.355	Mola_mola
ENSSFOG00015009921	-	96	82.096	ENSMMOG00000008466	-	95	81.800	Mola_mola
ENSSFOG00015009921	-	91	88.914	ENSMODG00000006287	SMARCA4	91	87.865	Monodelphis_domestica
ENSSFOG00015009921	-	97	84.331	ENSMALG00000003388	smarca4a	96	84.777	Monopterus_albus
ENSSFOG00015009921	-	87	83.309	ENSMALG00000021534	-	96	81.864	Monopterus_albus
ENSSFOG00015009921	-	91	90.868	MGP_CAROLIEiJ_G0031879	Smarca4	92	90.359	Mus_caroli
ENSSFOG00015009921	-	91	90.868	ENSMUSG00000032187	Smarca4	92	90.359	Mus_musculus
ENSSFOG00015009921	-	91	90.868	MGP_PahariEiJ_G0014745	Smarca4	95	87.625	Mus_pahari
ENSSFOG00015009921	-	91	90.868	MGP_SPRETEiJ_G0033003	Smarca4	92	90.359	Mus_spretus
ENSSFOG00015009921	-	91	90.944	ENSMPUG00000005711	SMARCA4	91	90.433	Mustela_putorius_furo
ENSSFOG00015009921	-	91	91.020	ENSMLUG00000004491	-	91	90.508	Myotis_lucifugus
ENSSFOG00015009921	-	92	90.826	ENSNGAG00000021852	Smarca4	91	90.209	Nannospalax_galili
ENSSFOG00015009921	-	88	91.760	ENSNBRG00000011457	smarca4a	93	84.569	Neolamprologus_brichardi
ENSSFOG00015009921	-	80	92.715	ENSNBRG00000018865	-	96	84.009	Neolamprologus_brichardi
ENSSFOG00015009921	-	90	89.643	ENSNLEG00000012389	SMARCA4	93	79.729	Nomascus_leucogenys
ENSSFOG00015009921	-	73	96.552	ENSOPRG00000000885	-	72	96.552	Ochotona_princeps
ENSSFOG00015009921	-	97	83.617	ENSODEG00000017127	SMARCA4	96	83.142	Octodon_degus
ENSSFOG00015009921	-	89	90.991	ENSONIG00000018040	-	95	82.286	Oreochromis_niloticus
ENSSFOG00015009921	-	94	91.017	ENSONIG00000008196	smarca4a	96	85.945	Oreochromis_niloticus
ENSSFOG00015009921	-	90	83.988	ENSOCUG00000001787	SMARCA4	91	82.599	Oryctolagus_cuniculus
ENSSFOG00015009921	-	88	90.998	ENSORLG00000003955	-	95	81.433	Oryzias_latipes
ENSSFOG00015009921	-	96	83.109	ENSORLG00000015452	smarca4a	96	83.344	Oryzias_latipes
ENSSFOG00015009921	-	92	90.930	ENSORLG00020009728	-	95	81.382	Oryzias_latipes_hni
ENSSFOG00015009921	-	92	89.978	ENSORLG00020004611	smarca4a	96	84.281	Oryzias_latipes_hni
ENSSFOG00015009921	-	92	89.978	ENSORLG00015016560	smarca4a	96	84.217	Oryzias_latipes_hsok
ENSSFOG00015009921	-	94	90.923	ENSORLG00015007739	-	95	81.121	Oryzias_latipes_hsok
ENSSFOG00015009921	-	92	91.141	ENSOMEG00000016626	-	95	81.382	Oryzias_melastigma
ENSSFOG00015009921	-	94	90.625	ENSOMEG00000007486	smarca4a	96	84.753	Oryzias_melastigma
ENSSFOG00015009921	-	82	89.768	ENSOGAG00000016148	SMARCA4	96	81.056	Otolemur_garnettii
ENSSFOG00015009921	-	91	90.563	ENSOARG00000017454	SMARCA4	96	81.079	Ovis_aries
ENSSFOG00015009921	-	93	89.643	ENSPPAG00000043191	SMARCA4	91	90.359	Pan_paniscus
ENSSFOG00015009921	-	91	90.812	ENSPPRG00000000064	SMARCA4	91	90.306	Panthera_pardus
ENSSFOG00015009921	-	89	86.509	ENSPTIG00000017447	SMARCA4	96	80.910	Panthera_tigris_altaica
ENSSFOG00015009921	-	93	89.643	ENSPTRG00000010488	SMARCA4	91	90.359	Pan_troglodytes
ENSSFOG00015009921	-	91	90.868	ENSPANG00000011042	SMARCA4	96	82.123	Papio_anubis
ENSSFOG00015009921	-	96	86.824	ENSPKIG00000007770	SMARCA4	96	86.785	Paramormyrops_kingsleyae
ENSSFOG00015009921	-	95	93.769	ENSPKIG00000010087	-	94	94.009	Paramormyrops_kingsleyae
ENSSFOG00015009921	-	92	87.620	ENSPSIG00000005547	SMARCA4	96	81.317	Pelodiscus_sinensis
ENSSFOG00015009921	-	91	90.661	ENSPEMG00000020389	Smarca4	96	81.175	Peromyscus_maniculatus_bairdii
ENSSFOG00015009921	-	91	91.082	ENSPCIG00000017138	SMARCA4	91	90.644	Phascolarctos_cinereus
ENSSFOG00015009921	-	94	89.688	ENSPFOG00000007892	smarca4a	91	89.828	Poecilia_formosa
ENSSFOG00015009921	-	89	90.896	ENSPFOG00000012930	-	96	78.293	Poecilia_formosa
ENSSFOG00015009921	-	91	91.635	ENSPLAG00000018616	-	95	84.551	Poecilia_latipinna
ENSSFOG00015009921	-	94	89.688	ENSPLAG00000014294	smarca4a	91	89.828	Poecilia_latipinna
ENSSFOG00015009921	-	90	90.683	ENSPMEG00000003725	smarca4a	88	90.816	Poecilia_mexicana
ENSSFOG00015009921	-	90	91.609	ENSPMEG00000008929	-	95	84.204	Poecilia_mexicana
ENSSFOG00015009921	-	90	87.902	ENSPREG00000014823	-	95	80.921	Poecilia_reticulata
ENSSFOG00015009921	-	94	89.755	ENSPREG00000014608	smarca4a	91	90.659	Poecilia_reticulata
ENSSFOG00015009921	-	91	88.641	ENSPPYG00000009568	SMARCA4	96	80.523	Pongo_abelii
ENSSFOG00015009921	-	71	84.768	ENSPCAG00000014054	SMARCA4	74	84.416	Procavia_capensis
ENSSFOG00015009921	-	91	90.791	ENSPCOG00000023011	SMARCA4	91	90.082	Propithecus_coquereli
ENSSFOG00015009921	-	89	91.882	ENSPVAG00000007787	SMARCA4	91	74.897	Pteropus_vampyrus
ENSSFOG00015009921	-	92	91.076	ENSPNYG00000000717	smarca4a	93	85.411	Pundamilia_nyererei
ENSSFOG00015009921	-	86	92.444	ENSPNYG00000023995	-	94	84.443	Pundamilia_nyererei
ENSSFOG00015009921	-	89	90.461	ENSPNAG00000024136	smarca4a	95	81.660	Pygocentrus_nattereri
ENSSFOG00015009921	-	95	85.503	ENSPNAG00000006636	-	89	92.857	Pygocentrus_nattereri
ENSSFOG00015009921	-	91	90.868	ENSRNOG00000009271	Smarca4	91	90.359	Rattus_norvegicus
ENSSFOG00015009921	-	91	90.868	ENSRBIG00000038696	SMARCA4	96	83.136	Rhinopithecus_bieti
ENSSFOG00015009921	-	91	90.868	ENSRROG00000045509	SMARCA4	91	90.359	Rhinopithecus_roxellana
ENSSFOG00015009921	-	93	89.964	ENSSBOG00000026896	SMARCA4	91	90.284	Saimiri_boliviensis_boliviensis
ENSSFOG00015009921	-	91	91.006	ENSSHAG00000001642	SMARCA4	91	90.644	Sarcophilus_harrisii
ENSSFOG00015009921	-	91	87.519	ENSSMAG00000014082	-	93	81.937	Scophthalmus_maximus
ENSSFOG00015009921	-	94	90.030	ENSSMAG00000003200	smarca4a	94	85.317	Scophthalmus_maximus
ENSSFOG00015009921	-	92	91.073	ENSSDUG00000005388	-	87	91.736	Seriola_dumerili
ENSSFOG00015009921	-	97	80.520	ENSSDUG00000017298	smarca4a	95	81.579	Seriola_dumerili
ENSSFOG00015009921	-	88	92.132	ENSSLDG00000023663	-	88	92.823	Seriola_lalandi_dorsalis
ENSSFOG00015009921	-	97	83.520	ENSSLDG00000024486	smarca4a	96	85.007	Seriola_lalandi_dorsalis
ENSSFOG00015009921	-	63	95.652	ENSSARG00000013477	SMARCA4	83	95.652	Sorex_araneus
ENSSFOG00015009921	-	88	86.630	ENSSPUG00000004558	SMARCA4	94	81.649	Sphenodon_punctatus
ENSSFOG00015009921	-	92	89.978	ENSSPAG00000012533	-	95	82.528	Stegastes_partitus
ENSSFOG00015009921	-	94	89.698	ENSSPAG00000004248	smarca4a	96	83.659	Stegastes_partitus
ENSSFOG00015009921	-	91	90.812	ENSSSCG00000013629	SMARCA4	96	81.112	Sus_scrofa
ENSSFOG00015009921	-	53	84.552	ENSTGUG00000015488	-	98	84.185	Taeniopygia_guttata
ENSSFOG00015009921	-	89	89.851	ENSTRUG00000001378	SMARCA4	95	82.492	Takifugu_rubripes
ENSSFOG00015009921	-	88	79.888	ENSTRUG00000004885	smarca4a	96	79.858	Takifugu_rubripes
ENSSFOG00015009921	-	73	85.866	ENSTNIG00000004859	-	100	85.866	Tetraodon_nigroviridis
ENSSFOG00015009921	-	83	89.005	ENSTNIG00000004536	SMARCA4	95	83.184	Tetraodon_nigroviridis
ENSSFOG00015009921	-	91	86.711	ENSTTRG00000009519	SMARCA4	96	78.882	Tursiops_truncatus
ENSSFOG00015009921	-	91	90.944	ENSUAMG00000014661	SMARCA4	91	90.433	Ursus_americanus
ENSSFOG00015009921	-	91	90.673	ENSUMAG00000022005	SMARCA4	98	90.791	Ursus_maritimus
ENSSFOG00015009921	-	91	90.868	ENSVVUG00000017820	SMARCA4	88	90.359	Vulpes_vulpes
ENSSFOG00015009921	-	99	79.683	ENSXETG00000009355	smarca4	96	77.681	Xenopus_tropicalis
ENSSFOG00015009921	-	96	83.725	ENSXCOG00000013494	-	95	81.560	Xiphophorus_couchianus
ENSSFOG00015009921	-	90	91.271	ENSXMAG00000007030	-	95	83.592	Xiphophorus_maculatus
ENSSFOG00015009921	-	94	89.607	ENSXMAG00000006321	smarca4a	91	90.862	Xiphophorus_maculatus