EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015009955 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 64013 bases
Position: chrKV410785.1:3727212-3791224
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015015471	Fox-1_C	PF12414.8	1.6e-33	1	1
ENSSFOP00015015471	RRM_1	PF00076.22	7.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015015653	-	1182	-	ENSSFOP00015015471	393 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015009955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015009955's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015009955	-	56	66.087	ENSSFOG00015000675	rbfox1l	63	66.383
ENSSFOG00015009955	-	89	54.545	ENSSFOG00015004716	RBFOX3	99	57.703
ENSSFOG00015009955	-	57	65.504	ENSSFOG00015010482	-	70	67.557
ENSSFOG00015009955	-	84	64.848	ENSSFOG00015023675	rbfox1	86	64.242
ENSSFOG00015009955	-	92	63.957	ENSSFOG00015023260	rbfox3a	96	64.624

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015009955	-	87	73.761	ENSG00000078328	RBFOX1	96	68.421	Homo_sapiens
ENSSFOG00015009955	-	85	71.143	ENSAPOG00000003197	rbfox1	88	72.141	Acanthochromis_polyacanthus
ENSSFOG00015009955	-	61	70.539	ENSAMEG00000008605	RBFOX1	93	70.539	Ailuropoda_melanoleuca
ENSSFOG00015009955	-	64	69.039	ENSACIG00000005478	rbfox1	71	66.904	Amphilophus_citrinellus
ENSSFOG00015009955	-	66	71.587	ENSAOCG00000008283	rbfox1	93	70.849	Amphiprion_ocellaris
ENSSFOG00015009955	-	81	63.609	ENSAPEG00000010636	rbfox1	99	58.649	Amphiprion_percula
ENSSFOG00015009955	-	67	67.832	ENSATEG00000007513	rbfox1	92	67.730	Anabas_testudineus
ENSSFOG00015009955	-	84	72.145	ENSAPLG00000013263	RBFOX1	88	72.145	Anas_platyrhynchos
ENSSFOG00015009955	-	83	69.274	ENSACAG00000004013	RBFOX1	88	69.274	Anolis_carolinensis
ENSSFOG00015009955	-	87	74.052	ENSANAG00000029527	RBFOX1	89	74.052	Aotus_nancymaae
ENSSFOG00015009955	-	60	72.340	ENSAMXG00000002431	rbfox1	67	72.034	Astyanax_mexicanus
ENSSFOG00015009955	-	84	70.083	ENSBTAG00000007210	RBFOX1	88	70.360	Bos_taurus
ENSSFOG00015009955	-	87	73.775	ENSCJAG00000017351	RBFOX1	87	73.775	Callithrix_jacchus
ENSSFOG00015009955	-	87	68.984	ENSCAFG00000019082	RBFOX1	88	68.984	Canis_familiaris
ENSSFOG00015009955	-	67	66.438	ENSCAFG00020024881	RBFOX1	80	66.438	Canis_lupus_dingo
ENSSFOG00015009955	-	84	70.083	ENSCHIG00000023549	RBFOX1	88	70.083	Capra_hircus
ENSSFOG00015009955	-	83	75.988	ENSTSYG00000005334	RBFOX1	89	75.988	Carlito_syrichta
ENSSFOG00015009955	-	87	68.182	ENSCAPG00000017669	RBFOX1	90	70.225	Cavia_aperea
ENSSFOG00015009955	-	87	68.182	ENSCPOG00000011314	RBFOX1	90	69.444	Cavia_porcellus
ENSSFOG00015009955	-	87	74.052	ENSCCAG00000023031	RBFOX1	89	74.052	Cebus_capucinus
ENSSFOG00015009955	-	87	73.761	ENSCATG00000033816	RBFOX1	89	73.761	Cercocebus_atys
ENSSFOG00015009955	-	87	68.182	ENSCLAG00000012761	RBFOX1	88	70.112	Chinchilla_lanigera
ENSSFOG00015009955	-	79	67.544	ENSCSAG00000008739	RBFOX1	87	68.563	Chlorocebus_sabaeus
ENSSFOG00015009955	-	63	88.000	ENSCHOG00000012843	RBFOX1	58	88.000	Choloepus_hoffmanni
ENSSFOG00015009955	-	89	75.354	ENSCPBG00000026626	RBFOX1	88	72.299	Chrysemys_picta_bellii
ENSSFOG00015009955	-	87	73.761	ENSCANG00000033125	RBFOX1	89	73.761	Colobus_angolensis_palliatus
ENSSFOG00015009955	-	87	68.280	ENSCGRG00001013729	Rbfox1	88	70.225	Cricetulus_griseus_chok1gshd
ENSSFOG00015009955	-	87	68.280	ENSCGRG00000003272	Rbfox1	88	70.225	Cricetulus_griseus_crigri
ENSSFOG00015009955	-	80	66.372	ENSCSEG00000008840	rbfox1	89	65.487	Cynoglossus_semilaevis
ENSSFOG00015009955	-	84	76.119	ENSDARG00000014746	rbfox1	100	75.701	Danio_rerio
ENSSFOG00015009955	-	84	70.833	ENSDNOG00000043612	RBFOX1	87	69.565	Dasypus_novemcinctus
ENSSFOG00015009955	-	85	68.392	ENSDORG00000010024	Rbfox1	93	68.956	Dipodomys_ordii
ENSSFOG00015009955	-	66	76.364	ENSETEG00000003771	RBFOX1	69	76.364	Echinops_telfairi
ENSSFOG00015009955	-	89	68.044	ENSEASG00005011599	RBFOX1	88	70.360	Equus_asinus_asinus
ENSSFOG00015009955	-	89	68.320	ENSECAG00000012667	RBFOX1	88	68.717	Equus_caballus
ENSSFOG00015009955	-	58	70.520	ENSELUG00000013096	rbfox1	73	71.098	Esox_lucius
ENSSFOG00015009955	-	89	73.371	ENSFCAG00000025322	RBFOX1	84	73.371	Felis_catus
ENSSFOG00015009955	-	79	70.206	ENSFALG00000004027	RBFOX1	99	70.206	Ficedula_albicollis
ENSSFOG00015009955	-	87	68.449	ENSFDAG00000007388	RBFOX1	88	70.391	Fukomys_damarensis
ENSSFOG00015009955	-	87	69.474	ENSGALG00000034325	RBFOX1	88	70.321	Gallus_gallus
ENSSFOG00015009955	-	87	76.081	ENSGAGG00000023681	RBFOX1	87	76.081	Gopherus_agassizii
ENSSFOG00015009955	-	87	73.761	ENSGGOG00000016871	-	89	73.761	Gorilla_gorilla
ENSSFOG00015009955	-	87	68.182	ENSHGLG00000016944	RBFOX1	88	70.112	Heterocephalus_glaber_female
ENSSFOG00015009955	-	87	68.182	ENSHGLG00100003272	RBFOX1	88	70.112	Heterocephalus_glaber_male
ENSSFOG00015009955	-	81	71.601	ENSHCOG00000016419	rbfox1	91	72.036	Hippocampus_comes
ENSSFOG00015009955	-	83	76.453	ENSIPUG00000015215	rbfox1	89	77.287	Ictalurus_punctatus
ENSSFOG00015009955	-	87	68.717	ENSSTOG00000000322	RBFOX1	89	69.806	Ictidomys_tridecemlineatus
ENSSFOG00015009955	-	87	68.817	ENSJJAG00000002575	Rbfox1	88	70.787	Jaculus_jaculus
ENSSFOG00015009955	-	84	71.137	ENSLBEG00000014659	rbfox1	96	69.577	Labrus_bergylta
ENSSFOG00015009955	-	84	72.727	ENSLOCG00000006675	rbfox1	90	72.727	Lepisosteus_oculatus
ENSSFOG00015009955	-	61	78.731	ENSLAFG00000011480	RBFOX1	87	79.104	Loxodonta_africana
ENSSFOG00015009955	-	87	73.761	ENSMFAG00000036447	RBFOX1	89	73.761	Macaca_fascicularis
ENSSFOG00015009955	-	87	73.761	ENSMMUG00000003458	RBFOX1	89	73.761	Macaca_mulatta
ENSSFOG00015009955	-	87	67.914	ENSMNEG00000032034	RBFOX1	91	67.828	Macaca_nemestrina
ENSSFOG00015009955	-	87	73.761	ENSMLEG00000015382	RBFOX1	89	73.761	Mandrillus_leucophaeus
ENSSFOG00015009955	-	80	70.213	ENSMAMG00000003142	rbfox1	92	70.149	Mastacembelus_armatus
ENSSFOG00015009955	-	67	70.890	ENSMGAG00000008606	RBFOX1	96	70.383	Meleagris_gallopavo
ENSSFOG00015009955	-	87	74.487	ENSMICG00000034286	RBFOX1	89	74.487	Microcebus_murinus
ENSSFOG00015009955	-	87	67.553	ENSMOCG00000020932	Rbfox1	89	70.201	Microtus_ochrogaster
ENSSFOG00015009955	-	88	70.255	ENSMMOG00000009716	rbfox1	94	69.688	Mola_mola
ENSSFOG00015009955	-	76	69.419	ENSMODG00000005826	RBFOX1	88	70.533	Monodelphis_domestica
ENSSFOG00015009955	-	85	69.318	ENSMALG00000003337	rbfox1	88	69.461	Monopterus_albus
ENSSFOG00015009955	-	87	67.819	MGP_CAROLIEiJ_G0020427	Rbfox1	88	70.225	Mus_caroli
ENSSFOG00015009955	-	87	68.085	ENSMUSG00000008658	Rbfox1	96	69.965	Mus_musculus
ENSSFOG00015009955	-	87	67.819	MGP_PahariEiJ_G0016135	Rbfox1	88	70.225	Mus_pahari
ENSSFOG00015009955	-	87	67.819	MGP_SPRETEiJ_G0021321	Rbfox1	88	70.225	Mus_spretus
ENSSFOG00015009955	-	83	65.915	ENSMPUG00000014822	RBFOX1	88	65.915	Mustela_putorius_furo
ENSSFOG00015009955	-	61	79.026	ENSMLUG00000015896	RBFOX1	87	79.026	Myotis_lucifugus
ENSSFOG00015009955	-	87	68.449	ENSNGAG00000023276	Rbfox1	90	70.506	Nannospalax_galili
ENSSFOG00015009955	-	85	54.447	ENSNBRG00000011084	rbfox1	86	53.908	Neolamprologus_brichardi
ENSSFOG00015009955	-	87	73.469	ENSNLEG00000010017	-	89	73.469	Nomascus_leucogenys
ENSSFOG00015009955	-	67	88.000	ENSMEUG00000012525	RBFOX1	62	88.000	Notamacropus_eugenii
ENSSFOG00015009955	-	61	70.124	ENSOPRG00000006199	-	56	70.124	Ochotona_princeps
ENSSFOG00015009955	-	87	68.984	ENSODEG00000013166	RBFOX1	88	70.950	Octodon_degus
ENSSFOG00015009955	-	79	68.421	ENSOANG00000002379	RBFOX1	87	69.461	Ornithorhynchus_anatinus
ENSSFOG00015009955	-	58	72.926	ENSOCUG00000001205	-	98	72.926	Oryctolagus_cuniculus
ENSSFOG00015009955	-	84	70.112	ENSOGAG00000025535	RBFOX1	89	70.112	Otolemur_garnettii
ENSSFOG00015009955	-	58	64.912	ENSOARG00000005135	RBFOX1	87	64.912	Ovis_aries
ENSSFOG00015009955	-	83	76.292	ENSPPAG00000036238	-	89	76.292	Pan_paniscus
ENSSFOG00015009955	-	87	74.636	ENSPPRG00000006546	RBFOX1	89	74.636	Panthera_pardus
ENSSFOG00015009955	-	84	64.412	ENSPTIG00000021154	RBFOX1	88	61.095	Panthera_tigris_altaica
ENSSFOG00015009955	-	87	73.761	ENSPTRG00000007744	RBFOX1	89	73.761	Pan_troglodytes
ENSSFOG00015009955	-	87	73.761	ENSPANG00000026500	RBFOX1	89	73.761	Papio_anubis
ENSSFOG00015009955	-	71	75.540	ENSPKIG00000019353	rbfox1	83	79.231	Paramormyrops_kingsleyae
ENSSFOG00015009955	-	90	73.816	ENSPKIG00000009667	-	90	75.549	Paramormyrops_kingsleyae
ENSSFOG00015009955	-	84	72.222	ENSPSIG00000006523	RBFOX1	88	72.222	Pelodiscus_sinensis
ENSSFOG00015009955	-	87	67.819	ENSPEMG00000017607	Rbfox1	88	70.225	Peromyscus_maniculatus_bairdii
ENSSFOG00015009955	-	56	80.723	ENSPCIG00000026887	RBFOX1	86	79.518	Phascolarctos_cinereus
ENSSFOG00015009955	-	83	65.634	ENSPPYG00000007079	-	88	65.634	Pongo_abelii
ENSSFOG00015009955	-	87	67.473	ENSPCAG00000002630	RBFOX1	97	67.473	Procavia_capensis
ENSSFOG00015009955	-	87	74.487	ENSPCOG00000025687	RBFOX1	89	74.487	Propithecus_coquereli
ENSSFOG00015009955	-	87	64.439	ENSPVAG00000013467	RBFOX1	88	64.439	Pteropus_vampyrus
ENSSFOG00015009955	-	80	74.474	ENSPNAG00000023109	rbfox1	89	74.474	Pygocentrus_nattereri
ENSSFOG00015009955	-	87	67.733	ENSRNOG00000002827	Rbfox1	88	68.194	Rattus_norvegicus
ENSSFOG00015009955	-	83	76.292	ENSRBIG00000044478	RBFOX1	89	76.292	Rhinopithecus_bieti
ENSSFOG00015009955	-	87	73.761	ENSRROG00000044411	RBFOX1	89	73.761	Rhinopithecus_roxellana
ENSSFOG00015009955	-	87	74.709	ENSSBOG00000033726	RBFOX1	89	74.709	Saimiri_boliviensis_boliviensis
ENSSFOG00015009955	-	86	69.565	ENSSHAG00000009257	RBFOX1	89	76.080	Sarcophilus_harrisii
ENSSFOG00015009955	-	85	66.575	ENSSMAG00000015505	rbfox1	96	70.145	Scophthalmus_maximus
ENSSFOG00015009955	-	84	72.997	ENSSDUG00000016413	rbfox1	89	72.404	Seriola_dumerili
ENSSFOG00015009955	-	90	68.156	ENSSLDG00000009353	rbfox1	99	67.967	Seriola_lalandi_dorsalis
ENSSFOG00015009955	-	84	79.331	ENSSPUG00000009732	RBFOX1	95	76.218	Sphenodon_punctatus
ENSSFOG00015009955	-	85	71.137	ENSSPAG00000009723	rbfox1	89	71.302	Stegastes_partitus
ENSSFOG00015009955	-	87	67.914	ENSSSCG00000007917	RBFOX1	88	69.279	Sus_scrofa
ENSSFOG00015009955	-	83	73.109	ENSTGUG00000004562	RBFOX1	90	73.109	Taeniopygia_guttata
ENSSFOG00015009955	-	87	70.739	ENSTRUG00000020940	rbfox1	98	70.455	Takifugu_rubripes
ENSSFOG00015009955	-	61	60.976	ENSTNIG00000002567	rbfox1	100	62.718	Tetraodon_nigroviridis
ENSSFOG00015009955	-	87	68.449	ENSTTRG00000005700	RBFOX1	88	68.449	Tursiops_truncatus
ENSSFOG00015009955	-	83	69.419	ENSUAMG00000024633	RBFOX1	88	70.245	Ursus_americanus
ENSSFOG00015009955	-	84	65.766	ENSUMAG00000003579	RBFOX1	88	63.501	Ursus_maritimus
ENSSFOG00015009955	-	61	78.731	ENSVPAG00000001284	RBFOX1	64	78.731	Vicugna_pacos
ENSSFOG00015009955	-	89	73.654	ENSVVUG00000017311	RBFOX1	84	73.654	Vulpes_vulpes