EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSFOG00015009988 (Gene tree)
Gene ID
108919841
Gene Symbol
-
Alias
wu:fb98b08|wu:fi16g01
Full Name
ras-related protein Rab-5C-like
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Plus strand
Length
21551 bases
Position
chrKV410803.1:269921-291471
Accession
108919841
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015015468MMR_HSR1PF01926.230.0001311
ENSSFOP00015015483MMR_HSR1PF01926.230.0001311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015015651-2360XM_018728134ENSSFOP00015015468220 (aa)XP_018583650A0A1W4XVS6
ENSSFOT00015015666-2494-ENSSFOP00015015483220 (aa)-A0A1W4XVS6
Gene Model
Click here to download ENSSFOG00015009988's gene model file
Pathways
Pathway IDPathway NameSource
sfm04144EndocytosisKEGG
sfm04145PhagosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015009988's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSFOG00015009988-7534.731ENSSFOG00015006846-9033.918
ENSSFOG00015009988-7341.566ENSSFOG00015004253rab33a7441.566
ENSSFOG00015009988-9980.645ENSSFOG00015014517rab5a9980.645
ENSSFOG00015009988-7531.515ENSSFOG00015014992rhebl18931.515
ENSSFOG00015009988-7444.785ENSSFOG00015009042rab11bb7544.785
ENSSFOG00015009988-9979.263ENSSFOG00015021115-9979.263
ENSSFOG00015009988-8734.359ENSSFOG00015017296rab159234.359
ENSSFOG00015009988-7943.678ENSSFOG00015008618rab11al8143.678
ENSSFOG00015009988-7535.152ENSSFOG00015023903KRAS9033.918
ENSSFOG00015009988-7640.698ENSSFOG00015021180RAB7A8340.698
ENSSFOG00015009988-5636.000ENSSFOG00015005188rab345736.000
ENSSFOG00015009988-7842.697ENSSFOG00015017444rab18a7342.697
ENSSFOG00015009988-8840.933ENSSFOG00015011268RAB419040.933
ENSSFOG00015009988-8640.306ENSSFOG00015006175zgc:1015598440.306
ENSSFOG00015009988-5532.258ENSSFOG00015019411arl8ba6332.258
ENSSFOG00015009988-8944.615ENSSFOG00015011140-9544.615
ENSSFOG00015009988-8942.857ENSSFOG00015020836rab1ba9642.857
ENSSFOG00015009988-7641.279ENSSFOG00015005076zgc:1009188341.279
ENSSFOG00015009988-9039.196ENSSFOG00015000865-9239.196
ENSSFOG00015009988-8937.436ENSSFOG00015006076rab359637.436
ENSSFOG00015009988-7834.682ENSSFOG00015023790rheb9234.682
ENSSFOG00015009988-8834.653ENSSFOG00015010492rab9b9734.653
ENSSFOG00015009988-7533.333ENSSFOG00015012604rab238334.091
ENSSFOG00015009988-9032.000ENSSFOG00015003051hrasb9531.980
ENSSFOG00015009988-7537.349ENSSFOG00015003628-7837.349
ENSSFOG00015009988-8837.949ENSSFOG00015021754rab139437.949
ENSSFOG00015009988-7342.236ENSSFOG00015011318-7542.236
ENSSFOG00015009988-8944.615ENSSFOG00015001293rab1ab9644.615
ENSSFOG00015009988-7840.698ENSSFOG00015015336rab4a8140.698
ENSSFOG00015009988-8933.498ENSSFOG00015003259rab9a9133.498
ENSSFOG00015009988-8141.573ENSSFOG00015015034rab2a9239.196
ENSSFOG00015009988-7132.500ENSSFOG00015004325rab34a6232.500
ENSSFOG00015009988-8942.365ENSSFOG00015005464zgc:1719279542.365
ENSSFOG00015009988-7845.029ENSSFOG00015002077rab6a8245.029
ENSSFOG00015009988-9441.063ENSSFOG00015019202RAB6B9941.063
ENSSFOG00015009988-8940.306ENSSFOG00015004941rab417844.643
ENSSFOG00015009988-5431.148ENSSFOG00015021537arl8a6231.148
ENSSFOG00015009988-6330.216ENSSFOG00015014423rras27830.216
ENSSFOG00015009988-7437.805ENSSFOG00015018421rab39b7737.805
ENSSFOG00015009988-7736.047ENSSFOG00015016000-8036.047
ENSSFOG00015009988-7746.552ENSSFOG00015008657rab25a8246.552
ENSSFOG00015009988-5532.258ENSSFOG00015020131arl8bb6632.258
ENSSFOG00015009988-8937.811ENSSFOG00015021448-9637.811
ENSSFOG00015009988-7332.099ENSSFOG00015006245-7232.099
ENSSFOG00015009988-7342.236ENSSFOG00015012785rab147542.236
ENSSFOG00015009988-7635.795ENSSFOG00015000053rab9a7935.795
ENSSFOG00015009988-8940.299ENSSFOG00015024042rab11a9340.299
ENSSFOG00015009988-7339.024ENSSFOG00015009566si:dkey-13a21.48039.024
ENSSFOG00015009988-7934.595ENSSFOG00015016156rab367334.595
ENSSFOG00015009988-7843.931ENSSFOG00015006414-8243.931
ENSSFOG00015009988-8834.848ENSSFOG00015024034rab33ba9534.848
ENSSFOG00015009988-8947.716ENSSFOG00015012085rab22a9847.716
ENSSFOG00015009988-7334.756ENSSFOG00015012088rab427434.756
ENSSFOG00015009988-7436.585ENSSFOG00015020732rab42a7736.585
ENSSFOG00015009988-8034.286ENSSFOG00015020738rabl27334.286
ENSSFOG00015009988-9039.512ENSSFOG00015020112rab33b9638.710
ENSSFOG00015009988-8838.693ENSSFOG00015011771-9538.693
ENSSFOG00015009988-7833.146ENSSFOG00015011157-9333.146
ENSSFOG00015009988-7640.698ENSSFOG00015020012rab7a8340.698
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015009988-9987.097ENSG00000108774RAB5C10095.604Homo_sapiens
ENSSFOG00015009988-10086.364ENSAPOG00000016864rab5c10086.364Acanthochromis_polyacanthus
ENSSFOG00015009988-9987.097ENSAMEG00000006003RAB5C9987.097Ailuropoda_melanoleuca
ENSSFOG00015009988-10086.818ENSACIG00000010896rab5c10086.818Amphilophus_citrinellus
ENSSFOG00015009988-10086.364ENSAOCG00000016614rab5c10086.364Amphiprion_ocellaris
ENSSFOG00015009988-9886.047ENSAPEG00000017868-9986.047Amphiprion_percula
ENSSFOG00015009988-9887.963ENSATEG00000001937rab5c9987.963Anabas_testudineus
ENSSFOG00015009988-9389.268ENSANAG00000025390RAB5C10089.268Aotus_nancymaae
ENSSFOG00015009988-9683.019ENSACLG00000008615-10081.982Astatotilapia_calliptera
ENSSFOG00015009988-10085.455ENSACLG00000002706rab5c10085.455Astatotilapia_calliptera
ENSSFOG00015009988-10088.688ENSAMXG00000043717rab5c10088.688Astyanax_mexicanus
ENSSFOG00015009988-9586.058ENSAMXG00000037267-9986.058Astyanax_mexicanus
ENSSFOG00015009988-9987.097ENSBTAG00000006982RAB5C9987.097Bos_taurus
ENSSFOG00015009988-9873.853WBGene00004268rab-59973.853Caenorhabditis_elegans
ENSSFOG00015009988-9987.097ENSCAFG00000015629RAB5C9987.097Canis_familiaris
ENSSFOG00015009988-9987.097ENSCAFG00020013537RAB5C9987.097Canis_lupus_dingo
ENSSFOG00015009988-9987.097ENSCHIG00000012960RAB5C9987.097Capra_hircus
ENSSFOG00015009988-9987.558ENSTSYG00000030531RAB5C9987.558Carlito_syrichta
ENSSFOG00015009988-9987.558ENSCCAG00000025940RAB5C9987.558Cebus_capucinus
ENSSFOG00015009988-9987.097ENSCATG00000040873RAB5C9987.097Cercocebus_atys
ENSSFOG00015009988-9987.097ENSCLAG00000016650RAB5C9987.097Chinchilla_lanigera
ENSSFOG00015009988-8192.135ENSCHOG00000009886RAB5C10092.135Choloepus_hoffmanni
ENSSFOG00015009988-10071.818ENSCING00000003340-10071.818Ciona_intestinalis
ENSSFOG00015009988-9872.072ENSCSAVG00000000613-9979.630Ciona_savignyi
ENSSFOG00015009988-9987.097ENSCGRG00001014226Rab5c9987.097Cricetulus_griseus_chok1gshd
ENSSFOG00015009988-9987.097ENSCGRG00000007534Rab5c9987.097Cricetulus_griseus_crigri
ENSSFOG00015009988-10085.000ENSCSEG00000017024rab5c10085.000Cynoglossus_semilaevis
ENSSFOG00015009988-10086.364ENSCVAG00000009550rab5c10086.364Cyprinodon_variegatus
ENSSFOG00015009988-9987.558ENSDNOG00000038853RAB5C9987.558Dasypus_novemcinctus
ENSSFOG00015009988-9987.097ENSDORG00000006819Rab5c9987.097Dipodomys_ordii
ENSSFOG00015009988-9869.907FBgn0014010Rab59569.907Drosophila_melanogaster
ENSSFOG00015009988-8584.409ENSEBUG00000014794rab5c8884.409Eptatretus_burgeri
ENSSFOG00015009988-9987.097ENSEASG00005009281RAB5C9987.097Equus_asinus_asinus
ENSSFOG00015009988-9987.558ENSECAG00000025054RAB5C9987.558Equus_caballus
ENSSFOG00015009988-9987.097ENSEEUG00000002790RAB5C9987.097Erinaceus_europaeus
ENSSFOG00015009988-10085.000ENSELUG00000010439-10085.000Esox_lucius
ENSSFOG00015009988-9885.648ENSELUG00000018516rab5c9985.648Esox_lucius
ENSSFOG00015009988-9987.097ENSFCAG00000002148RAB5C9987.097Felis_catus
ENSSFOG00015009988-9986.175ENSFDAG00000021541RAB5C9986.175Fukomys_damarensis
ENSSFOG00015009988-10087.273ENSFHEG00000012117rab5c10087.273Fundulus_heteroclitus
ENSSFOG00015009988-9885.253ENSFHEG00000015268-9985.253Fundulus_heteroclitus
ENSSFOG00015009988-10085.909ENSGMOG00000015096rab5c10085.909Gadus_morhua
ENSSFOG00015009988-7684.524ENSGMOG00000001876-9784.524Gadus_morhua
ENSSFOG00015009988-10088.182ENSGAFG00000000884rab5c10088.182Gambusia_affinis
ENSSFOG00015009988-9587.081ENSGAFG00000003642-9984.545Gambusia_affinis
ENSSFOG00015009988-10084.545ENSGACG00000008659rab5c10084.545Gasterosteus_aculeatus
ENSSFOG00015009988-9987.097ENSGGOG00000005472RAB5C9987.097Gorilla_gorilla
ENSSFOG00015009988-10085.455ENSHBUG00000002014rab5c10085.455Haplochromis_burtoni
ENSSFOG00015009988-9683.019ENSHBUG00000006823-10081.982Haplochromis_burtoni
ENSSFOG00015009988-9986.636ENSHGLG00000012067RAB5C9986.636Heterocephalus_glaber_female
ENSSFOG00015009988-10086.607ENSHCOG00000004662rab5c10086.607Hippocampus_comes
ENSSFOG00015009988-9577.725ENSHCOG00000020238-9976.256Hippocampus_comes
ENSSFOG00015009988-9288.177ENSIPUG00000020082rab5c10085.586Ictalurus_punctatus
ENSSFOG00015009988-9986.636ENSSTOG00000006620RAB5C9986.636Ictidomys_tridecemlineatus
ENSSFOG00015009988-9987.558ENSJJAG00000021181Rab5c9987.558Jaculus_jaculus
ENSSFOG00015009988-9885.253ENSKMAG00000017417-9985.253Kryptolebias_marmoratus
ENSSFOG00015009988-10086.818ENSKMAG00000020038rab5c10086.818Kryptolebias_marmoratus
ENSSFOG00015009988-10084.163ENSLBEG00000010408-10084.163Labrus_bergylta
ENSSFOG00015009988-10087.727ENSLBEG00000004128rab5c10087.727Labrus_bergylta
ENSSFOG00015009988-9887.037ENSLOCG00000012566rab5c10087.037Lepisosteus_oculatus
ENSSFOG00015009988-9987.097ENSMFAG00000039627RAB5C9987.097Macaca_fascicularis
ENSSFOG00015009988-9987.097ENSMNEG00000000355RAB5C9987.097Macaca_nemestrina
ENSSFOG00015009988-9884.793ENSMAMG00000016207-9984.793Mastacembelus_armatus
ENSSFOG00015009988-10087.273ENSMAMG00000022322rab5c10087.273Mastacembelus_armatus
ENSSFOG00015009988-10085.455ENSMZEG00005022735rab5c10085.455Maylandia_zebra
ENSSFOG00015009988-9683.019ENSMZEG00005021090-10081.982Maylandia_zebra
ENSSFOG00015009988-9987.558ENSMAUG00000015005Rab5c9987.558Mesocricetus_auratus
ENSSFOG00015009988-9987.097ENSMICG00000041608RAB5C9987.097Microcebus_murinus
ENSSFOG00015009988-9987.558ENSMOCG00000018531-9987.558Microtus_ochrogaster
ENSSFOG00015009988-10086.364ENSMMOG00000020621rab5c10086.364Mola_mola
ENSSFOG00015009988-9881.395ENSMALG00000006052rab5c9781.395Monopterus_albus
ENSSFOG00015009988-9985.321ENSMALG00000022348-9985.321Monopterus_albus
ENSSFOG00015009988-9987.558MGP_CAROLIEiJ_G0017184Rab5c9987.558Mus_caroli
ENSSFOG00015009988-9987.558ENSMUSG00000019173Rab5c9987.558Mus_musculus
ENSSFOG00015009988-9987.558MGP_PahariEiJ_G0018314Rab5c9987.558Mus_pahari
ENSSFOG00015009988-9987.558MGP_SPRETEiJ_G0018027Rab5c9987.558Mus_spretus
ENSSFOG00015009988-9987.097ENSMPUG00000010554RAB5C9987.097Mustela_putorius_furo
ENSSFOG00015009988-9987.558ENSNGAG00000010286Rab5c9987.558Nannospalax_galili
ENSSFOG00015009988-10086.364ENSNBRG00000018165rab5c10086.364Neolamprologus_brichardi
ENSSFOG00015009988-9683.019ENSNBRG00000016922-10081.982Neolamprologus_brichardi
ENSSFOG00015009988-8185.393ENSOPRG00000008255RAB5C10085.393Ochotona_princeps
ENSSFOG00015009988-9987.097ENSODEG00000017920RAB5C9987.097Octodon_degus
ENSSFOG00015009988-10086.364ENSONIG00000001113rab5c10086.364Oreochromis_niloticus
ENSSFOG00015009988-9887.037ENSORLG00000003882rab5c9987.037Oryzias_latipes
ENSSFOG00015009988-9887.037ENSORLG00020008388rab5c9987.037Oryzias_latipes_hni
ENSSFOG00015009988-9887.037ENSORLG00015021900rab5c9987.037Oryzias_latipes_hsok
ENSSFOG00015009988-9887.037ENSOMEG00000023078rab5c9987.037Oryzias_melastigma
ENSSFOG00015009988-9987.558ENSOGAG00000009456RAB5C9987.558Otolemur_garnettii
ENSSFOG00015009988-9987.097ENSOARG00000018768RAB5C9987.097Ovis_aries
ENSSFOG00015009988-9987.097ENSPPAG00000037206RAB5C9987.097Pan_paniscus
ENSSFOG00015009988-9987.097ENSPPRG00000005745RAB5C9987.097Panthera_pardus
ENSSFOG00015009988-9987.097ENSPTIG00000008177RAB5C9987.097Panthera_tigris_altaica
ENSSFOG00015009988-9987.097ENSPTRG00000009194RAB5C9987.097Pan_troglodytes
ENSSFOG00015009988-9887.037ENSPKIG00000001237-9987.037Paramormyrops_kingsleyae
ENSSFOG00015009988-9883.796ENSPKIG00000020112-9983.796Paramormyrops_kingsleyae
ENSSFOG00015009988-10085.000ENSPMGG00000010792rab5c9986.512Periophthalmus_magnuspinnatus
ENSSFOG00015009988-9987.558ENSPEMG00000017971Rab5c9987.558Peromyscus_maniculatus_bairdii
ENSSFOG00015009988-9977.477ENSPMAG00000000008rab5c10077.477Petromyzon_marinus
ENSSFOG00015009988-9974.194ENSPMAG00000001399rab5c10074.194Petromyzon_marinus
ENSSFOG00015009988-9974.654ENSPMAG00000007867rab5c10074.654Petromyzon_marinus
ENSSFOG00015009988-9987.097ENSPCIG00000020225-9987.097Phascolarctos_cinereus
ENSSFOG00015009988-9984.545ENSPLAG00000016333-10084.545Poecilia_latipinna
ENSSFOG00015009988-10088.182ENSPLAG00000004790rab5c10088.182Poecilia_latipinna
ENSSFOG00015009988-9685.915ENSPMEG00000012614-10083.857Poecilia_mexicana
ENSSFOG00015009988-10088.182ENSPMEG00000011336rab5c10088.182Poecilia_mexicana
ENSSFOG00015009988-8884.021ENSPREG00000022167-9583.505Poecilia_reticulata
ENSSFOG00015009988-10088.182ENSPREG00000010146rab5c10088.182Poecilia_reticulata
ENSSFOG00015009988-9987.097ENSPPYG00000008398RAB5C9987.097Pongo_abelii
ENSSFOG00015009988-9987.097ENSPCAG00000016412RAB5C9987.097Procavia_capensis
ENSSFOG00015009988-9987.097ENSPCOG00000026327RAB5C9987.097Propithecus_coquereli
ENSSFOG00015009988-9987.558ENSPVAG00000003867RAB5C9987.558Pteropus_vampyrus
ENSSFOG00015009988-9683.019ENSPNYG00000015851-10081.982Pundamilia_nyererei
ENSSFOG00015009988-10085.455ENSPNYG00000010615rab5c10085.455Pundamilia_nyererei
ENSSFOG00015009988-10088.235ENSPNAG00000028138rab5c10088.235Pygocentrus_nattereri
ENSSFOG00015009988-9584.615ENSPNAG00000002218-9884.615Pygocentrus_nattereri
ENSSFOG00015009988-9987.558ENSRNOG00000018568Rab5c9987.558Rattus_norvegicus
ENSSFOG00015009988-9987.097ENSRBIG00000031376RAB5C9987.097Rhinopithecus_bieti
ENSSFOG00015009988-9987.097ENSRROG00000032895RAB5C9987.097Rhinopithecus_roxellana
ENSSFOG00015009988-9987.558ENSSBOG00000032552-9987.558Saimiri_boliviensis_boliviensis
ENSSFOG00015009988-9987.558ENSSHAG00000005267-9987.558Sarcophilus_harrisii
ENSSFOG00015009988-9588.517ENSSMAG00000007323rab5c10086.818Scophthalmus_maximus
ENSSFOG00015009988-10087.273ENSSDUG00000023008rab5c10087.273Seriola_dumerili
ENSSFOG00015009988-10086.364ENSSLDG00000017771rab5c10086.364Seriola_lalandi_dorsalis
ENSSFOG00015009988-9987.558ENSSPUG00000012950-9987.558Sphenodon_punctatus
ENSSFOG00015009988-10087.727ENSSPAG00000006436rab5c10087.727Stegastes_partitus
ENSSFOG00015009988-9987.097ENSSSCG00000032467RAB5C9987.097Sus_scrofa
ENSSFOG00015009988-10086.364ENSTRUG00000015590rab5c10086.364Takifugu_rubripes
ENSSFOG00015009988-9588.038ENSTNIG00000011711rab5c9588.038Tetraodon_nigroviridis
ENSSFOG00015009988-9987.097ENSTBEG00000007092RAB5C9987.097Tupaia_belangeri
ENSSFOG00015009988-9986.636ENSTTRG00000006673RAB5C9986.636Tursiops_truncatus
ENSSFOG00015009988-9987.097ENSUAMG00000024343RAB5C9987.097Ursus_americanus
ENSSFOG00015009988-9987.097ENSUMAG00000023270RAB5C9987.097Ursus_maritimus
ENSSFOG00015009988-9587.560ENSXCOG00000006300-9985.000Xiphophorus_couchianus
ENSSFOG00015009988-10087.727ENSXCOG00000016788rab5c10087.727Xiphophorus_couchianus
ENSSFOG00015009988-10088.182ENSXMAG00000003266rab5c10088.182Xiphophorus_maculatus
ENSSFOG00015009988-9985.000ENSXMAG00000022179-10085.000Xiphophorus_maculatus

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