EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015010127 (Gene tree)
Gene ID: 108925422
Gene Symbol: thoc2
Alias: Tho2|fb73e08|fd21d11|si:bz1o18.2|wu:fb73e08|wu:fd21d11
Full Name: THO complex subunit 2-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 45082 bases
Position: chrKV410842.1:6406256-6451337
Accession: 108925422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015015846	Tho2	PF11262.8	5.5e-101	1	1
ENSSFOP00015015795	Tho2	PF11262.8	7.1e-101	1	1
ENSSFOP00015015846	Thoc2	PF11732.8	1.8e-35	1	1
ENSSFOP00015015795	Thoc2	PF11732.8	2.1e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015016029	-	4026	-	ENSSFOP00015015846	1341 (aa)	-	-
ENSSFOT00015015978	-	5688	XM_018737319	ENSSFOP00015015795	1560 (aa)	XP_018592835	A0A1W4YWQ7

Gene Model

Click here to download ENSSFOG00015010127's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03013	RNA transport	KEGG
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015010127's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015010127	thoc2	98	87.982	ENSSFOG00015004767	THOC2	100	85.016

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015010127	thoc2	98	78.853	ENSG00000125676	THOC2	100	76.732	Homo_sapiens
ENSSFOG00015010127	thoc2	98	85.768	ENSAPOG00000003459	thoc2	100	81.772	Acanthochromis_polyacanthus
ENSSFOG00015010127	thoc2	98	78.455	ENSAMEG00000014841	THOC2	99	75.594	Ailuropoda_melanoleuca
ENSSFOG00015010127	thoc2	98	82.557	ENSACIG00000015022	thoc2	99	82.557	Amphilophus_citrinellus
ENSSFOG00015010127	thoc2	97	85.265	ENSAOCG00000013305	thoc2	97	81.818	Amphiprion_ocellaris
ENSSFOG00015010127	thoc2	98	84.151	ENSAPEG00000004792	thoc2	97	81.889	Amphiprion_percula
ENSSFOG00015010127	thoc2	98	85.584	ENSATEG00000013110	thoc2	99	81.591	Anabas_testudineus
ENSSFOG00015010127	thoc2	98	79.510	ENSAPLG00000010614	THOC2	100	78.224	Anas_platyrhynchos
ENSSFOG00015010127	thoc2	98	78.007	ENSACAG00000011585	THOC2	100	76.321	Anolis_carolinensis
ENSSFOG00015010127	thoc2	98	75.742	ENSANAG00000034037	-	99	74.239	Aotus_nancymaae
ENSSFOG00015010127	thoc2	98	77.398	ENSANAG00000022505	-	99	76.207	Aotus_nancymaae
ENSSFOG00015010127	thoc2	98	85.019	ENSACLG00000012036	thoc2	100	79.030	Astatotilapia_calliptera
ENSSFOG00015010127	thoc2	99	81.487	ENSAMXG00000014184	thoc2	97	81.568	Astyanax_mexicanus
ENSSFOG00015010127	thoc2	98	78.928	ENSBTAG00000008388	THOC2	99	75.422	Bos_taurus
ENSSFOG00015010127	thoc2	98	77.530	ENSBTAG00000047341	-	98	73.708	Bos_taurus
ENSSFOG00015010127	thoc2	92	34.909	WBGene00015813	thoc-2	93	33.263	Caenorhabditis_elegans
ENSSFOG00015010127	thoc2	98	79.002	ENSCJAG00000016157	THOC2	98	77.746	Callithrix_jacchus
ENSSFOG00015010127	thoc2	98	79.077	ENSCAFG00000018574	THOC2	99	75.485	Canis_familiaris
ENSSFOG00015010127	thoc2	98	78.779	ENSCAFG00020002284	THOC2	99	74.937	Canis_lupus_dingo
ENSSFOG00015010127	thoc2	98	78.630	ENSCHIG00000017733	-	99	74.749	Capra_hircus
ENSSFOG00015010127	thoc2	98	78.018	ENSCHIG00000025851	-	99	74.121	Capra_hircus
ENSSFOG00015010127	thoc2	98	78.555	ENSTSYG00000012292	THOC2	99	73.684	Carlito_syrichta
ENSSFOG00015010127	thoc2	98	76.677	ENSCPOG00000038670	THOC2	99	73.036	Cavia_porcellus
ENSSFOG00015010127	thoc2	98	78.928	ENSCCAG00000021906	THOC2	99	75.610	Cebus_capucinus
ENSSFOG00015010127	thoc2	98	78.853	ENSCATG00000003183	THOC2	99	75.547	Cercocebus_atys
ENSSFOG00015010127	thoc2	98	78.779	ENSCLAG00000002641	THOC2	99	75.814	Chinchilla_lanigera
ENSSFOG00015010127	thoc2	98	78.853	ENSCSAG00000018332	THOC2	99	75.547	Chlorocebus_sabaeus
ENSSFOG00015010127	thoc2	98	79.851	ENSCPBG00000012863	THOC2	99	81.740	Chrysemys_picta_bellii
ENSSFOG00015010127	thoc2	82	59.005	ENSCING00000007364	-	99	57.107	Ciona_intestinalis
ENSSFOG00015010127	thoc2	74	57.942	ENSCSAVG00000007923	-	99	75.269	Ciona_savignyi
ENSSFOG00015010127	thoc2	98	78.928	ENSCANG00000035077	THOC2	99	75.547	Colobus_angolensis_palliatus
ENSSFOG00015010127	thoc2	98	77.960	ENSCGRG00001015509	Thoc2	99	73.807	Cricetulus_griseus_chok1gshd
ENSSFOG00015010127	thoc2	98	75.893	ENSCGRG00001009811	BC005561	99	73.287	Cricetulus_griseus_chok1gshd
ENSSFOG00015010127	thoc2	98	75.893	ENSCGRG00000000980	BC005561	99	73.224	Cricetulus_griseus_crigri
ENSSFOG00015010127	thoc2	98	75.949	ENSCGRG00000001226	Thoc2	99	72.339	Cricetulus_griseus_crigri
ENSSFOG00015010127	thoc2	97	81.627	ENSCSEG00000019946	thoc2	99	81.627	Cynoglossus_semilaevis
ENSSFOG00015010127	thoc2	99	78.748	ENSCVAG00000021509	thoc2	100	76.336	Cyprinodon_variegatus
ENSSFOG00015010127	thoc2	98	84.830	ENSDARG00000037503	thoc2	100	81.083	Danio_rerio
ENSSFOG00015010127	thoc2	98	77.952	ENSDNOG00000012487	THOC2	99	73.288	Dasypus_novemcinctus
ENSSFOG00015010127	thoc2	97	43.021	FBgn0031390	tho2	75	46.302	Drosophila_melanogaster
ENSSFOG00015010127	thoc2	98	69.955	ENSETEG00000016183	THOC2	91	70.187	Echinops_telfairi
ENSSFOG00015010127	thoc2	98	79.108	ENSEASG00005017399	THOC2	100	76.625	Equus_asinus_asinus
ENSSFOG00015010127	thoc2	98	79.108	ENSECAG00000010431	THOC2	99	76.410	Equus_caballus
ENSSFOG00015010127	thoc2	73	86.731	ENSEEUG00000015598	THOC2	78	86.731	Erinaceus_europaeus
ENSSFOG00015010127	thoc2	98	84.951	ENSELUG00000007778	thoc2	96	83.381	Esox_lucius
ENSSFOG00015010127	thoc2	98	79.002	ENSFCAG00000008301	THOC2	99	75.422	Felis_catus
ENSSFOG00015010127	thoc2	98	79.300	ENSFALG00000001519	THOC2	99	77.433	Ficedula_albicollis
ENSSFOG00015010127	thoc2	98	78.720	ENSFDAG00000017237	THOC2	99	75.683	Fukomys_damarensis
ENSSFOG00015010127	thoc2	99	80.886	ENSFHEG00000001695	thoc2	100	76.815	Fundulus_heteroclitus
ENSSFOG00015010127	thoc2	98	80.594	ENSGMOG00000000069	thoc2	99	74.501	Gadus_morhua
ENSSFOG00015010127	thoc2	98	80.343	ENSGALG00000008507	THOC2	98	79.343	Gallus_gallus
ENSSFOG00015010127	thoc2	97	81.756	ENSGAFG00000005902	thoc2	100	78.497	Gambusia_affinis
ENSSFOG00015010127	thoc2	97	83.728	ENSGACG00000020367	thoc2	97	79.757	Gasterosteus_aculeatus
ENSSFOG00015010127	thoc2	98	80.252	ENSGAGG00000024263	THOC2	99	77.235	Gopherus_agassizii
ENSSFOG00015010127	thoc2	98	78.928	ENSGGOG00000000486	THOC2	99	75.547	Gorilla_gorilla
ENSSFOG00015010127	thoc2	98	86.147	ENSHBUG00000003516	thoc2	99	83.449	Haplochromis_burtoni
ENSSFOG00015010127	thoc2	98	78.125	ENSHGLG00000004222	THOC2	99	74.969	Heterocephalus_glaber_female
ENSSFOG00015010127	thoc2	94	80.204	ENSHGLG00100011595	THOC2	92	80.237	Heterocephalus_glaber_male
ENSSFOG00015010127	thoc2	98	82.740	ENSHCOG00000006276	thoc2	99	79.158	Hippocampus_comes
ENSSFOG00015010127	thoc2	98	83.735	ENSIPUG00000015876	thoc2	100	80.420	Ictalurus_punctatus
ENSSFOG00015010127	thoc2	98	78.539	ENSSTOG00000009134	THOC2	99	75.062	Ictidomys_tridecemlineatus
ENSSFOG00015010127	thoc2	98	78.407	ENSJJAG00000017282	Thoc2	99	74.875	Jaculus_jaculus
ENSSFOG00015010127	thoc2	98	74.554	ENSJJAG00000008784	BC005561	99	71.716	Jaculus_jaculus
ENSSFOG00015010127	thoc2	96	84.538	ENSKMAG00000012263	thoc2	99	83.124	Kryptolebias_marmoratus
ENSSFOG00015010127	thoc2	98	84.784	ENSLBEG00000003049	thoc2	98	83.285	Labrus_bergylta
ENSSFOG00015010127	thoc2	98	80.357	ENSLACG00000016494	THOC2	99	77.593	Latimeria_chalumnae
ENSSFOG00015010127	thoc2	99	86.957	ENSLOCG00000014546	thoc2	99	85.070	Lepisosteus_oculatus
ENSSFOG00015010127	thoc2	98	78.704	ENSLAFG00000003146	THOC2	99	75.422	Loxodonta_africana
ENSSFOG00015010127	thoc2	98	78.853	ENSMFAG00000042215	THOC2	99	75.547	Macaca_fascicularis
ENSSFOG00015010127	thoc2	98	78.928	ENSMMUG00000003745	THOC2	100	76.005	Macaca_mulatta
ENSSFOG00015010127	thoc2	98	78.853	ENSMNEG00000033627	THOC2	99	75.547	Macaca_nemestrina
ENSSFOG00015010127	thoc2	98	78.928	ENSMLEG00000034817	THOC2	99	75.547	Mandrillus_leucophaeus
ENSSFOG00015010127	thoc2	98	84.015	ENSMAMG00000012993	thoc2	100	78.667	Mastacembelus_armatus
ENSSFOG00015010127	thoc2	98	86.071	ENSMZEG00005015842	thoc2	100	81.812	Maylandia_zebra
ENSSFOG00015010127	thoc2	98	80.045	ENSMGAG00000007345	THOC2	99	77.587	Meleagris_gallopavo
ENSSFOG00015010127	thoc2	98	77.960	ENSMAUG00000002356	Thoc2	99	74.484	Mesocricetus_auratus
ENSSFOG00015010127	thoc2	98	78.853	ENSMICG00000011840	THOC2	99	75.297	Microcebus_murinus
ENSSFOG00015010127	thoc2	98	77.736	ENSMOCG00000009946	Thoc2	99	74.109	Microtus_ochrogaster
ENSSFOG00015010127	thoc2	98	75.800	ENSMOCG00000019406	BC005561	99	72.853	Microtus_ochrogaster
ENSSFOG00015010127	thoc2	98	82.165	ENSMMOG00000016313	thoc2	95	82.925	Mola_mola
ENSSFOG00015010127	thoc2	98	77.541	ENSMODG00000014984	THOC2	99	74.843	Monodelphis_domestica
ENSSFOG00015010127	thoc2	99	80.318	ENSMALG00000019718	thoc2	100	77.325	Monopterus_albus
ENSSFOG00015010127	thoc2	98	78.109	MGP_CAROLIEiJ_G0033023	Thoc2	99	74.547	Mus_caroli
ENSSFOG00015010127	thoc2	98	75.744	MGP_CAROLIEiJ_G0027482	BC005561	99	72.431	Mus_caroli
ENSSFOG00015010127	thoc2	98	78.109	ENSMUSG00000037475	Thoc2	99	74.547	Mus_musculus
ENSSFOG00015010127	thoc2	98	76.042	ENSMUSG00000079065	BC005561	99	72.682	Mus_musculus
ENSSFOG00015010127	thoc2	98	78.109	MGP_PahariEiJ_G0031569	Thoc2	99	74.484	Mus_pahari
ENSSFOG00015010127	thoc2	98	76.208	MGP_PahariEiJ_G0017260	BC005561	99	72.761	Mus_pahari
ENSSFOG00015010127	thoc2	98	76.042	MGP_SPRETEiJ_G0028479	BC005561	99	72.682	Mus_spretus
ENSSFOG00015010127	thoc2	98	78.109	MGP_SPRETEiJ_G0034181	Thoc2	99	74.547	Mus_spretus
ENSSFOG00015010127	thoc2	98	78.534	ENSMPUG00000001357	THOC2	99	75.047	Mustela_putorius_furo
ENSSFOG00015010127	thoc2	98	72.755	ENSMLUG00000026072	-	99	70.167	Myotis_lucifugus
ENSSFOG00015010127	thoc2	89	74.522	ENSMLUG00000027559	-	97	71.719	Myotis_lucifugus
ENSSFOG00015010127	thoc2	98	78.396	ENSMLUG00000013656	-	99	74.651	Myotis_lucifugus
ENSSFOG00015010127	thoc2	98	68.862	ENSMLUG00000028256	-	99	66.180	Myotis_lucifugus
ENSSFOG00015010127	thoc2	98	78.465	ENSNGAG00000016184	Thoc2	99	73.956	Nannospalax_galili
ENSSFOG00015010127	thoc2	98	76.286	ENSNGAG00000010936	BC005561	99	72.893	Nannospalax_galili
ENSSFOG00015010127	thoc2	94	86.231	ENSNBRG00000018089	thoc2	99	81.542	Neolamprologus_brichardi
ENSSFOG00015010127	thoc2	98	73.630	ENSNLEG00000015055	THOC2	99	70.497	Nomascus_leucogenys
ENSSFOG00015010127	thoc2	82	81.844	ENSMEUG00000003533	THOC2	81	81.844	Notamacropus_eugenii
ENSSFOG00015010127	thoc2	98	78.332	ENSODEG00000002478	THOC2	99	75.156	Octodon_degus
ENSSFOG00015010127	thoc2	98	86.157	ENSONIG00000004348	thoc2	99	81.899	Oreochromis_niloticus
ENSSFOG00015010127	thoc2	98	79.434	ENSOANG00000004054	THOC2	99	76.429	Ornithorhynchus_anatinus
ENSSFOG00015010127	thoc2	98	78.407	ENSOCUG00000005996	THOC2	99	74.906	Oryctolagus_cuniculus
ENSSFOG00015010127	thoc2	98	83.497	ENSORLG00000008692	thoc2	100	79.159	Oryzias_latipes
ENSSFOG00015010127	thoc2	99	79.654	ENSORLG00020002321	thoc2	94	83.281	Oryzias_latipes_hni
ENSSFOG00015010127	thoc2	97	82.811	ENSORLG00015000665	thoc2	98	81.210	Oryzias_latipes_hsok
ENSSFOG00015010127	thoc2	97	83.728	ENSOMEG00000004006	thoc2	99	79.385	Oryzias_melastigma
ENSSFOG00015010127	thoc2	98	78.630	ENSOGAG00000000302	THOC2	99	75.047	Otolemur_garnettii
ENSSFOG00015010127	thoc2	98	78.928	ENSOARG00000013665	-	99	75.635	Ovis_aries
ENSSFOG00015010127	thoc2	71	87.500	ENSOARG00000003614	-	95	87.500	Ovis_aries
ENSSFOG00015010127	thoc2	98	77.794	ENSPPAG00000040720	THOC2	99	77.433	Pan_paniscus
ENSSFOG00015010127	thoc2	98	79.002	ENSPPRG00000023137	THOC2	99	75.360	Panthera_pardus
ENSSFOG00015010127	thoc2	98	77.629	ENSPTIG00000006983	THOC2	99	74.327	Panthera_tigris_altaica
ENSSFOG00015010127	thoc2	98	78.853	ENSPTRG00000022246	THOC2	99	75.547	Pan_troglodytes
ENSSFOG00015010127	thoc2	98	77.066	ENSPANG00000004038	THOC2	99	73.418	Papio_anubis
ENSSFOG00015010127	thoc2	99	90.249	ENSPKIG00000021719	thoc2	94	90.479	Paramormyrops_kingsleyae
ENSSFOG00015010127	thoc2	98	79.133	ENSPSIG00000015352	THOC2	98	76.694	Pelodiscus_sinensis
ENSSFOG00015010127	thoc2	99	78.753	ENSPMGG00000002688	thoc2	100	73.274	Periophthalmus_magnuspinnatus
ENSSFOG00015010127	thoc2	98	76.190	ENSPEMG00000011125	BC005561	99	72.710	Peromyscus_maniculatus_bairdii
ENSSFOG00015010127	thoc2	98	77.885	ENSPEMG00000007626	Thoc2	99	74.250	Peromyscus_maniculatus_bairdii
ENSSFOG00015010127	thoc2	98	65.481	ENSPMAG00000007219	-	99	72.853	Petromyzon_marinus
ENSSFOG00015010127	thoc2	70	83.387	ENSPCIG00000007574	THOC2	99	83.656	Phascolarctos_cinereus
ENSSFOG00015010127	thoc2	97	83.410	ENSPFOG00000019556	thoc2	99	79.180	Poecilia_formosa
ENSSFOG00015010127	thoc2	99	79.403	ENSPLAG00000005761	thoc2	100	77.559	Poecilia_latipinna
ENSSFOG00015010127	thoc2	99	79.258	ENSPMEG00000002951	thoc2	100	77.241	Poecilia_mexicana
ENSSFOG00015010127	thoc2	97	83.410	ENSPREG00000021746	thoc2	100	79.464	Poecilia_reticulata
ENSSFOG00015010127	thoc2	98	78.853	ENSPPYG00000020695	THOC2	99	75.547	Pongo_abelii
ENSSFOG00015010127	thoc2	99	64.610	ENSPCAG00000005402	THOC2	100	64.794	Procavia_capensis
ENSSFOG00015010127	thoc2	99	76.813	ENSPCOG00000001806	THOC2	99	72.932	Propithecus_coquereli
ENSSFOG00015010127	thoc2	98	78.034	ENSPVAG00000006132	THOC2	99	75.841	Pteropus_vampyrus
ENSSFOG00015010127	thoc2	98	85.247	ENSPNYG00000019622	thoc2	100	79.134	Pundamilia_nyererei
ENSSFOG00015010127	thoc2	98	81.373	ENSPNAG00000020593	thoc2	100	78.081	Pygocentrus_nattereri
ENSSFOG00015010127	thoc2	98	78.034	ENSRNOG00000007315	Thoc2	99	74.547	Rattus_norvegicus
ENSSFOG00015010127	thoc2	98	75.967	ENSRNOG00000042340	LOC679894	99	72.682	Rattus_norvegicus
ENSSFOG00015010127	thoc2	93	76.658	ENSRBIG00000044129	THOC2	98	75.815	Rhinopithecus_bieti
ENSSFOG00015010127	thoc2	98	78.928	ENSRROG00000041515	THOC2	99	75.547	Rhinopithecus_roxellana
ENSSFOG00015010127	thoc2	98	79.002	ENSSBOG00000007245	THOC2	99	75.610	Saimiri_boliviensis_boliviensis
ENSSFOG00015010127	thoc2	98	78.380	ENSSHAG00000015987	THOC2	99	76.018	Sarcophilus_harrisii
ENSSFOG00015010127	thoc2	98	85.238	ENSSMAG00000016574	thoc2	100	81.134	Scophthalmus_maximus
ENSSFOG00015010127	thoc2	98	85.844	ENSSDUG00000012815	thoc2	100	83.467	Seriola_dumerili
ENSSFOG00015010127	thoc2	98	85.693	ENSSLDG00000015816	thoc2	100	81.836	Seriola_lalandi_dorsalis
ENSSFOG00015010127	thoc2	98	72.788	ENSSARG00000005799	THOC2	100	71.738	Sorex_araneus
ENSSFOG00015010127	thoc2	98	78.325	ENSSPUG00000012889	THOC2	99	75.886	Sphenodon_punctatus
ENSSFOG00015010127	thoc2	95	85.792	ENSSPAG00000023593	thoc2	92	85.814	Stegastes_partitus
ENSSFOG00015010127	thoc2	98	79.104	ENSSSCG00000012639	THOC2	99	76.410	Sus_scrofa
ENSSFOG00015010127	thoc2	96	80.243	ENSTGUG00000003682	THOC2	100	79.212	Taeniopygia_guttata
ENSSFOG00015010127	thoc2	98	81.453	ENSTRUG00000015122	thoc2	99	77.643	Takifugu_rubripes
ENSSFOG00015010127	thoc2	98	79.939	ENSTNIG00000011794	thoc2	99	75.163	Tetraodon_nigroviridis
ENSSFOG00015010127	thoc2	86	75.085	ENSTBEG00000004420	-	100	72.366	Tupaia_belangeri
ENSSFOG00015010127	thoc2	66	80.531	ENSTBEG00000005854	-	55	81.818	Tupaia_belangeri
ENSSFOG00015010127	thoc2	99	71.393	ENSTTRG00000002762	THOC2	99	73.163	Tursiops_truncatus
ENSSFOG00015010127	thoc2	98	78.955	ENSUAMG00000008780	THOC2	99	78.102	Ursus_americanus
ENSSFOG00015010127	thoc2	98	74.152	ENSUMAG00000024014	THOC2	99	71.888	Ursus_maritimus
ENSSFOG00015010127	thoc2	98	78.928	ENSVPAG00000006247	THOC2	100	76.866	Vicugna_pacos
ENSSFOG00015010127	thoc2	98	78.779	ENSVVUG00000028282	THOC2	99	77.778	Vulpes_vulpes
ENSSFOG00015010127	thoc2	98	75.706	ENSXETG00000016195	thoc2	99	86.645	Xenopus_tropicalis
ENSSFOG00015010127	thoc2	97	81.693	ENSXCOG00000006301	thoc2	100	78.343	Xiphophorus_couchianus
ENSSFOG00015010127	thoc2	97	81.693	ENSXMAG00000011604	thoc2	99	80.316	Xiphophorus_maculatus