EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015010190 (Gene tree)
Gene ID: 108920513
Gene Symbol: rnaseh2b
Alias: zgc:56602
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 26768 bases
Position: chrKV411293.1:5167759-5194526
Accession: 108920513
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015015813	RNase_H2-Ydr279	PF09468.10	7.3e-17	1	1
ENSSFOP00015015796	RNase_H2-Ydr279	PF09468.10	8.1e-17	1	1
ENSSFOP00015015776	RNase_H2-Ydr279	PF09468.10	9.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015015997	-	2786	-	ENSSFOP00015015813	280 (aa)	-	-
ENSSFOT00015015960	-	1270	-	ENSSFOP00015015776	332 (aa)	-	-
ENSSFOT00015015980	-	2864	XM_018729294	ENSSFOP00015015796	306 (aa)	XP_018584810	A0A1W4Y8L8

Gene Model

Click here to download ENSSFOG00015010190's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015010190's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015010190	rnaseh2b	95	49.832	ENSG00000136104	RNASEH2B	96	57.143	Homo_sapiens
ENSSFOG00015010190	rnaseh2b	100	71.569	ENSAPOG00000010496	rnaseh2b	99	71.569	Acanthochromis_polyacanthus
ENSSFOG00015010190	rnaseh2b	91	50.352	ENSAMEG00000012040	RNASEH2B	95	50.352	Ailuropoda_melanoleuca
ENSSFOG00015010190	rnaseh2b	100	61.438	ENSACIG00000021991	rnaseh2b	97	67.839	Amphilophus_citrinellus
ENSSFOG00015010190	rnaseh2b	100	70.915	ENSAOCG00000013398	rnaseh2b	99	70.915	Amphiprion_ocellaris
ENSSFOG00015010190	rnaseh2b	100	70.588	ENSAPEG00000006033	rnaseh2b	99	70.588	Amphiprion_percula
ENSSFOG00015010190	rnaseh2b	100	71.569	ENSATEG00000008370	rnaseh2b	99	71.569	Anabas_testudineus
ENSSFOG00015010190	rnaseh2b	84	60.465	ENSAPLG00000008955	RNASEH2B	100	60.073	Anas_platyrhynchos
ENSSFOG00015010190	rnaseh2b	93	54.671	ENSACAG00000011679	RNASEH2B	97	54.671	Anolis_carolinensis
ENSSFOG00015010190	rnaseh2b	91	50.896	ENSANAG00000020662	RNASEH2B	90	50.896	Aotus_nancymaae
ENSSFOG00015010190	rnaseh2b	100	69.281	ENSACLG00000000467	rnaseh2b	99	69.281	Astatotilapia_calliptera
ENSSFOG00015010190	rnaseh2b	100	70.588	ENSAMXG00000014351	rnaseh2b	99	70.588	Astyanax_mexicanus
ENSSFOG00015010190	rnaseh2b	87	51.852	ENSBTAG00000020149	RNASEH2B	87	51.852	Bos_taurus
ENSSFOG00015010190	rnaseh2b	90	50.181	ENSCJAG00000008585	-	94	48.951	Callithrix_jacchus
ENSSFOG00015010190	rnaseh2b	85	44.304	ENSCJAG00000003822	-	86	44.304	Callithrix_jacchus
ENSSFOG00015010190	rnaseh2b	91	50.179	ENSCAFG00000004295	RNASEH2B	91	49.821	Canis_familiaris
ENSSFOG00015010190	rnaseh2b	91	50.179	ENSCAFG00020000250	RNASEH2B	94	48.958	Canis_lupus_dingo
ENSSFOG00015010190	rnaseh2b	90	50.903	ENSCHIG00000018220	RNASEH2B	90	50.903	Capra_hircus
ENSSFOG00015010190	rnaseh2b	75	47.414	ENSCHIG00000012982	-	82	47.414	Capra_hircus
ENSSFOG00015010190	rnaseh2b	91	49.821	ENSTSYG00000009176	-	91	49.821	Carlito_syrichta
ENSSFOG00015010190	rnaseh2b	94	42.759	ENSTSYG00000031177	-	95	42.759	Carlito_syrichta
ENSSFOG00015010190	rnaseh2b	91	44.086	ENSCAPG00000009978	RNASEH2B	94	44.086	Cavia_aperea
ENSSFOG00015010190	rnaseh2b	91	48.571	ENSCPOG00000032527	RNASEH2B	90	48.571	Cavia_porcellus
ENSSFOG00015010190	rnaseh2b	91	50.896	ENSCCAG00000026979	RNASEH2B	91	50.903	Cebus_capucinus
ENSSFOG00015010190	rnaseh2b	87	52.239	ENSCATG00000031336	RNASEH2B	76	52.239	Cercocebus_atys
ENSSFOG00015010190	rnaseh2b	91	51.957	ENSCLAG00000003517	RNASEH2B	77	51.957	Chinchilla_lanigera
ENSSFOG00015010190	rnaseh2b	89	50.903	ENSCSAG00000017701	RNASEH2B	84	50.903	Chlorocebus_sabaeus
ENSSFOG00015010190	rnaseh2b	95	43.390	ENSCHOG00000013688	RNASEH2B	95	44.407	Choloepus_hoffmanni
ENSSFOG00015010190	rnaseh2b	99	60.197	ENSCPBG00000008684	RNASEH2B	94	60.197	Chrysemys_picta_bellii
ENSSFOG00015010190	rnaseh2b	87	35.842	ENSCING00000016454	-	89	35.842	Ciona_intestinalis
ENSSFOG00015010190	rnaseh2b	91	51.064	ENSCANG00000041511	-	90	51.064	Colobus_angolensis_palliatus
ENSSFOG00015010190	rnaseh2b	91	52.688	ENSCGRG00001000611	Rnaseh2b	91	53.381	Cricetulus_griseus_chok1gshd
ENSSFOG00015010190	rnaseh2b	91	52.688	ENSCGRG00000006077	Rnaseh2b	91	53.381	Cricetulus_griseus_crigri
ENSSFOG00015010190	rnaseh2b	99	69.836	ENSCSEG00000004910	rnaseh2b	99	69.836	Cynoglossus_semilaevis
ENSSFOG00015010190	rnaseh2b	100	69.608	ENSCVAG00000005212	rnaseh2b	99	69.608	Cyprinodon_variegatus
ENSSFOG00015010190	rnaseh2b	100	70.588	ENSDARG00000005128	rnaseh2b	99	70.588	Danio_rerio
ENSSFOG00015010190	rnaseh2b	93	45.833	ENSDNOG00000034290	-	93	45.833	Dasypus_novemcinctus
ENSSFOG00015010190	rnaseh2b	94	47.241	ENSDNOG00000049666	-	94	47.241	Dasypus_novemcinctus
ENSSFOG00015010190	rnaseh2b	88	52.045	ENSDORG00000010708	Rnaseh2b	87	52.045	Dipodomys_ordii
ENSSFOG00015010190	rnaseh2b	84	41.085	ENSEBUG00000005965	rnaseh2b	98	41.085	Eptatretus_burgeri
ENSSFOG00015010190	rnaseh2b	91	51.613	ENSEASG00005017323	RNASEH2B	90	51.613	Equus_asinus_asinus
ENSSFOG00015010190	rnaseh2b	91	51.613	ENSECAG00000014262	RNASEH2B	90	51.613	Equus_caballus
ENSSFOG00015010190	rnaseh2b	100	69.281	ENSELUG00000019560	rnaseh2b	99	69.281	Esox_lucius
ENSSFOG00015010190	rnaseh2b	92	49.645	ENSFCAG00000014257	RNASEH2B	86	49.645	Felis_catus
ENSSFOG00015010190	rnaseh2b	95	57.483	ENSFALG00000008435	RNASEH2B	99	57.483	Ficedula_albicollis
ENSSFOG00015010190	rnaseh2b	91	49.821	ENSFDAG00000009920	RNASEH2B	97	49.821	Fukomys_damarensis
ENSSFOG00015010190	rnaseh2b	100	70.915	ENSFHEG00000012160	rnaseh2b	99	70.915	Fundulus_heteroclitus
ENSSFOG00015010190	rnaseh2b	100	65.064	ENSGMOG00000016830	rnaseh2b	99	65.064	Gadus_morhua
ENSSFOG00015010190	rnaseh2b	95	55.102	ENSGALG00000017015	RNASEH2B	100	55.016	Gallus_gallus
ENSSFOG00015010190	rnaseh2b	100	68.301	ENSGAFG00000021222	rnaseh2b	99	68.301	Gambusia_affinis
ENSSFOG00015010190	rnaseh2b	100	66.346	ENSGACG00000002821	rnaseh2b	99	66.346	Gasterosteus_aculeatus
ENSSFOG00015010190	rnaseh2b	90	62.094	ENSGAGG00000014722	RNASEH2B	99	62.094	Gopherus_agassizii
ENSSFOG00015010190	rnaseh2b	91	51.418	ENSGGOG00000001044	RNASEH2B	90	51.418	Gorilla_gorilla
ENSSFOG00015010190	rnaseh2b	100	69.935	ENSHBUG00000006049	rnaseh2b	99	69.935	Haplochromis_burtoni
ENSSFOG00015010190	rnaseh2b	91	50.538	ENSHGLG00100015953	RNASEH2B	95	50.538	Heterocephalus_glaber_male
ENSSFOG00015010190	rnaseh2b	100	65.584	ENSHCOG00000003318	rnaseh2b	99	65.584	Hippocampus_comes
ENSSFOG00015010190	rnaseh2b	99	72.787	ENSIPUG00000023815	rnaseh2b	99	72.787	Ictalurus_punctatus
ENSSFOG00015010190	rnaseh2b	90	51.986	ENSSTOG00000015126	RNASEH2B	95	51.986	Ictidomys_tridecemlineatus
ENSSFOG00015010190	rnaseh2b	91	50.179	ENSJJAG00000013335	Rnaseh2b	94	50.179	Jaculus_jaculus
ENSSFOG00015010190	rnaseh2b	100	69.608	ENSKMAG00000002198	rnaseh2b	99	69.608	Kryptolebias_marmoratus
ENSSFOG00015010190	rnaseh2b	99	68.525	ENSLBEG00000019331	rnaseh2b	99	68.525	Labrus_bergylta
ENSSFOG00015010190	rnaseh2b	68	61.321	ENSLACG00000010782	RNASEH2B	91	61.233	Latimeria_chalumnae
ENSSFOG00015010190	rnaseh2b	100	68.301	ENSLOCG00000009296	rnaseh2b	99	68.301	Lepisosteus_oculatus
ENSSFOG00015010190	rnaseh2b	91	50.000	ENSLAFG00000030158	RNASEH2B	92	49.650	Loxodonta_africana
ENSSFOG00015010190	rnaseh2b	91	51.613	ENSMFAG00000038464	-	90	51.613	Macaca_fascicularis
ENSSFOG00015010190	rnaseh2b	91	48.029	ENSMMUG00000021746	RNASEH2B	92	46.875	Macaca_mulatta
ENSSFOG00015010190	rnaseh2b	91	51.613	ENSMNEG00000030580	RNASEH2B	90	51.613	Macaca_nemestrina
ENSSFOG00015010190	rnaseh2b	91	51.064	ENSMLEG00000043911	-	90	51.064	Mandrillus_leucophaeus
ENSSFOG00015010190	rnaseh2b	100	71.895	ENSMAMG00000017109	rnaseh2b	99	71.895	Mastacembelus_armatus
ENSSFOG00015010190	rnaseh2b	100	65.686	ENSMZEG00005021926	rnaseh2b	99	65.696	Maylandia_zebra
ENSSFOG00015010190	rnaseh2b	88	56.777	ENSMGAG00000015025	RNASEH2B	100	56.597	Meleagris_gallopavo
ENSSFOG00015010190	rnaseh2b	88	53.160	ENSMAUG00000016520	Rnaseh2b	87	53.875	Mesocricetus_auratus
ENSSFOG00015010190	rnaseh2b	88	52.045	ENSMICG00000000528	RNASEH2B	87	52.045	Microcebus_murinus
ENSSFOG00015010190	rnaseh2b	100	67.974	ENSMMOG00000019799	rnaseh2b	100	70.732	Mola_mola
ENSSFOG00015010190	rnaseh2b	100	55.844	ENSMODG00000010775	RNASEH2B	99	55.844	Monodelphis_domestica
ENSSFOG00015010190	rnaseh2b	100	71.242	ENSMALG00000004463	rnaseh2b	100	71.242	Monopterus_albus
ENSSFOG00015010190	rnaseh2b	73	55.111	MGP_CAROLIEiJ_G0019389	Rnaseh2b	82	56.828	Mus_caroli
ENSSFOG00015010190	rnaseh2b	88	53.160	ENSMUSG00000021932	Rnaseh2b	89	52.174	Mus_musculus
ENSSFOG00015010190	rnaseh2b	91	42.547	MGP_PahariEiJ_G0030407	-	92	42.547	Mus_pahari
ENSSFOG00015010190	rnaseh2b	82	46.522	ENSMPUG00000018010	RNASEH2B	94	46.522	Mustela_putorius_furo
ENSSFOG00015010190	rnaseh2b	91	52.330	ENSMLUG00000004065	-	90	52.500	Myotis_lucifugus
ENSSFOG00015010190	rnaseh2b	100	68.954	ENSNBRG00000003253	rnaseh2b	99	68.954	Neolamprologus_brichardi
ENSSFOG00015010190	rnaseh2b	91	51.418	ENSNLEG00000003804	RNASEH2B	90	51.418	Nomascus_leucogenys
ENSSFOG00015010190	rnaseh2b	92	55.401	ENSMEUG00000003665	RNASEH2B	98	55.401	Notamacropus_eugenii
ENSSFOG00015010190	rnaseh2b	53	52.469	ENSOPRG00000003695	-	52	55.758	Ochotona_princeps
ENSSFOG00015010190	rnaseh2b	94	49.653	ENSODEG00000006793	-	93	49.653	Octodon_degus
ENSSFOG00015010190	rnaseh2b	68	47.847	ENSODEG00000005412	-	86	47.847	Octodon_degus
ENSSFOG00015010190	rnaseh2b	100	69.281	ENSONIG00000006657	rnaseh2b	99	69.281	Oreochromis_niloticus
ENSSFOG00015010190	rnaseh2b	93	57.388	ENSOANG00000015537	RNASEH2B	100	57.388	Ornithorhynchus_anatinus
ENSSFOG00015010190	rnaseh2b	89	50.000	ENSOCUG00000008904	RNASEH2B	85	51.103	Oryctolagus_cuniculus
ENSSFOG00015010190	rnaseh2b	99	67.327	ENSORLG00000011850	rnaseh2b	100	67.763	Oryzias_latipes
ENSSFOG00015010190	rnaseh2b	99	67.657	ENSORLG00020012081	rnaseh2b	100	68.092	Oryzias_latipes_hni
ENSSFOG00015010190	rnaseh2b	99	67.327	ENSORLG00015015468	rnaseh2b	100	67.763	Oryzias_latipes_hsok
ENSSFOG00015010190	rnaseh2b	99	68.317	ENSOMEG00000012441	rnaseh2b	100	68.317	Oryzias_melastigma
ENSSFOG00015010190	rnaseh2b	91	52.128	ENSOGAG00000016486	RNASEH2B	94	52.128	Otolemur_garnettii
ENSSFOG00015010190	rnaseh2b	90	51.264	ENSOARG00000008701	RNASEH2B	93	51.264	Ovis_aries
ENSSFOG00015010190	rnaseh2b	88	52.941	ENSPPAG00000026374	RNASEH2B	98	48.458	Pan_paniscus
ENSSFOG00015010190	rnaseh2b	91	49.117	ENSPPRG00000012450	RNASEH2B	92	49.117	Panthera_pardus
ENSSFOG00015010190	rnaseh2b	88	50.916	ENSPTIG00000013918	RNASEH2B	97	50.916	Panthera_tigris_altaica
ENSSFOG00015010190	rnaseh2b	91	51.418	ENSPTRG00000005886	RNASEH2B	95	54.618	Pan_troglodytes
ENSSFOG00015010190	rnaseh2b	88	52.574	ENSPANG00000022424	-	87	52.574	Papio_anubis
ENSSFOG00015010190	rnaseh2b	99	73.770	ENSPKIG00000013386	rnaseh2b	99	73.770	Paramormyrops_kingsleyae
ENSSFOG00015010190	rnaseh2b	67	53.968	ENSPSIG00000002224	RNASEH2B	88	53.968	Pelodiscus_sinensis
ENSSFOG00015010190	rnaseh2b	65	72.727	ENSPMGG00000010299	rnaseh2b	96	72.727	Periophthalmus_magnuspinnatus
ENSSFOG00015010190	rnaseh2b	91	53.047	ENSPEMG00000019721	Rnaseh2b	87	55.351	Peromyscus_maniculatus_bairdii
ENSSFOG00015010190	rnaseh2b	89	55.882	ENSPCIG00000014535	-	94	54.839	Phascolarctos_cinereus
ENSSFOG00015010190	rnaseh2b	100	69.156	ENSPFOG00000016722	rnaseh2b	99	69.156	Poecilia_formosa
ENSSFOG00015010190	rnaseh2b	100	69.281	ENSPLAG00000011755	rnaseh2b	99	69.281	Poecilia_latipinna
ENSSFOG00015010190	rnaseh2b	100	69.608	ENSPMEG00000002721	rnaseh2b	99	69.608	Poecilia_mexicana
ENSSFOG00015010190	rnaseh2b	100	68.301	ENSPREG00000007737	rnaseh2b	99	68.301	Poecilia_reticulata
ENSSFOG00015010190	rnaseh2b	91	51.418	ENSPPYG00000005378	RNASEH2B	90	51.418	Pongo_abelii
ENSSFOG00015010190	rnaseh2b	88	52.574	ENSPCOG00000026623	RNASEH2B	87	52.574	Propithecus_coquereli
ENSSFOG00015010190	rnaseh2b	79	49.593	ENSPVAG00000000508	RNASEH2B	92	49.593	Pteropus_vampyrus
ENSSFOG00015010190	rnaseh2b	100	69.608	ENSPNYG00000013552	rnaseh2b	99	69.608	Pundamilia_nyererei
ENSSFOG00015010190	rnaseh2b	100	70.915	ENSPNAG00000024825	rnaseh2b	99	70.915	Pygocentrus_nattereri
ENSSFOG00015010190	rnaseh2b	91	51.601	ENSRNOG00000009192	Rnaseh2b	91	51.601	Rattus_norvegicus
ENSSFOG00015010190	rnaseh2b	92	45.196	ENSRBIG00000036017	-	92	45.196	Rhinopithecus_bieti
ENSSFOG00015010190	rnaseh2b	91	51.254	ENSRBIG00000028928	-	90	51.254	Rhinopithecus_bieti
ENSSFOG00015010190	rnaseh2b	91	51.254	ENSRROG00000018808	-	90	51.254	Rhinopithecus_roxellana
ENSSFOG00015010190	rnaseh2b	75	43.333	ENSRROG00000044915	-	79	43.602	Rhinopithecus_roxellana
ENSSFOG00015010190	rnaseh2b	91	50.538	ENSSBOG00000008081	RNASEH2B	96	52.416	Saimiri_boliviensis_boliviensis
ENSSFOG00015010190	rnaseh2b	100	57.792	ENSSHAG00000016190	RNASEH2B	99	57.792	Sarcophilus_harrisii
ENSSFOG00015010190	rnaseh2b	100	70.261	ENSSMAG00000001546	rnaseh2b	99	70.261	Scophthalmus_maximus
ENSSFOG00015010190	rnaseh2b	100	73.529	ENSSDUG00000007567	rnaseh2b	99	73.529	Seriola_dumerili
ENSSFOG00015010190	rnaseh2b	100	71.010	ENSSLDG00000012485	rnaseh2b	99	71.010	Seriola_lalandi_dorsalis
ENSSFOG00015010190	rnaseh2b	86	54.717	ENSSPUG00000006745	-	95	54.717	Sphenodon_punctatus
ENSSFOG00015010190	rnaseh2b	100	71.569	ENSSPAG00000020926	rnaseh2b	99	71.569	Stegastes_partitus
ENSSFOG00015010190	rnaseh2b	87	52.045	ENSSSCG00000024385	RNASEH2B	95	53.659	Sus_scrofa
ENSSFOG00015010190	rnaseh2b	89	61.905	ENSTGUG00000012104	RNASEH2B	100	61.905	Taeniopygia_guttata
ENSSFOG00015010190	rnaseh2b	100	69.935	ENSTRUG00000015098	rnaseh2b	99	69.935	Takifugu_rubripes
ENSSFOG00015010190	rnaseh2b	100	69.481	ENSTNIG00000013861	rnaseh2b	99	69.481	Tetraodon_nigroviridis
ENSSFOG00015010190	rnaseh2b	90	44.286	ENSTTRG00000010761	RNASEH2B	91	45.000	Tursiops_truncatus
ENSSFOG00015010190	rnaseh2b	91	50.538	ENSUAMG00000022849	RNASEH2B	96	52.045	Ursus_americanus
ENSSFOG00015010190	rnaseh2b	91	50.179	ENSUMAG00000018556	RNASEH2B	96	51.673	Ursus_maritimus
ENSSFOG00015010190	rnaseh2b	87	52.963	ENSVPAG00000005679	RNASEH2B	93	52.963	Vicugna_pacos
ENSSFOG00015010190	rnaseh2b	91	49.821	ENSVVUG00000024015	RNASEH2B	83	50.538	Vulpes_vulpes
ENSSFOG00015010190	rnaseh2b	100	55.844	ENSXETG00000020720	rnaseh2b	100	55.844	Xenopus_tropicalis
ENSSFOG00015010190	rnaseh2b	100	67.101	ENSXCOG00000018732	rnaseh2b	99	67.101	Xiphophorus_couchianus
ENSSFOG00015010190	rnaseh2b	100	68.627	ENSXMAG00000022554	rnaseh2b	99	68.627	Xiphophorus_maculatus