EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015010205 (Gene tree)
Gene ID: 108924249
Gene Symbol: pcbp3 (1 of many)
Alias: -
Full Name: poly(rC)-binding protein 3
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 42010 bases
Position: chrKV410833.1:4419745-4461754
Accession: 108924249
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015015870	KH_1	PF00013.29	1.9e-55	1	3
ENSSFOP00015015870	KH_1	PF00013.29	1.9e-55	2	3
ENSSFOP00015015870	KH_1	PF00013.29	1.9e-55	3	3
ENSSFOP00015015882	KH_1	PF00013.29	3.8e-49	1	3
ENSSFOP00015015882	KH_1	PF00013.29	3.8e-49	2	3
ENSSFOP00015015882	KH_1	PF00013.29	3.8e-49	3	3
ENSSFOP00015015870	KH_2	PF07650.17	3.4e-14	1	1
ENSSFOP00015015882	KH_2	PF07650.17	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015016066	-	999	-	ENSSFOP00015015882	332 (aa)	-	-
ENSSFOT00015016054	-	4624	XM_018735485	ENSSFOP00015015870	326 (aa)	XP_018591001	A0A1W4YRT7

Gene Model

Click here to download ENSSFOG00015010205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015010205's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015010205	pcbp3	76	52.857	ENSSFOG00015023730	hnrpkl	56	52.857
ENSSFOG00015010205	pcbp3	71	39.683	ENSSFOG00015011098	fubp3	69	39.683
ENSSFOG00015010205	pcbp3	91	33.803	ENSSFOG00015002540	igf2bp1	59	33.803
ENSSFOG00015010205	pcbp3	74	34.694	ENSSFOG00015010213	fubp1	52	32.800
ENSSFOG00015010205	pcbp3	91	32.609	ENSSFOG00015005197	igf2bp1	53	32.609
ENSSFOG00015010205	pcbp3	74	39.706	ENSSFOG00015004204	nova2	55	39.706
ENSSFOG00015010205	pcbp3	72	63.008	ENSSFOG00015008221	pcbp4	50	59.302
ENSSFOG00015010205	pcbp3	90	36.709	ENSSFOG00015007770	igf2bp2b	68	36.709
ENSSFOG00015010205	pcbp3	98	58.721	ENSSFOG00015012075	PCBP4	76	58.721
ENSSFOG00015010205	pcbp3	94	79.739	ENSSFOG00015017796	PCBP2	98	77.815
ENSSFOG00015010205	pcbp3	97	78.481	ENSSFOG00015013231	PCBP2	96	78.914
ENSSFOG00015010205	pcbp3	65	41.176	ENSSFOG00015010767	KHSRP	54	41.176
ENSSFOG00015010205	pcbp3	91	30.043	ENSSFOG00015010909	-	72	41.333
ENSSFOG00015010205	pcbp3	68	42.647	ENSSFOG00015018719	khsrp	61	42.647
ENSSFOG00015010205	pcbp3	93	41.270	ENSSFOG00015012455	-	60	41.270
ENSSFOG00015010205	pcbp3	81	52.857	ENSSFOG00015009351	hnrnpk	67	45.679
ENSSFOG00015010205	pcbp3	100	95.181	ENSSFOG00015014706	pcbp3	100	90.544
ENSSFOG00015010205	pcbp3	98	80.247	ENSSFOG00015007118	-	93	86.047
ENSSFOG00015010205	pcbp3	92	34.507	ENSSFOG00015014056	igf2bp3	61	34.507

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015010205	pcbp3	100	98.777	ENSAPOG00000016582	-	100	98.777	Acanthochromis_polyacanthus
ENSSFOG00015010205	pcbp3	95	94.839	ENSAPOG00000020003	pcbp3	86	94.839	Acanthochromis_polyacanthus
ENSSFOG00015010205	pcbp3	98	87.202	ENSAMEG00000001697	-	96	87.834	Ailuropoda_melanoleuca
ENSSFOG00015010205	pcbp3	100	90.991	ENSACIG00000002739	-	97	93.711	Amphilophus_citrinellus
ENSSFOG00015010205	pcbp3	100	94.595	ENSACIG00000010933	pcbp3	95	94.595	Amphilophus_citrinellus
ENSSFOG00015010205	pcbp3	97	95.584	ENSAOCG00000008592	-	100	95.584	Amphiprion_ocellaris
ENSSFOG00015010205	pcbp3	90	95.035	ENSAOCG00000007806	-	97	95.035	Amphiprion_ocellaris
ENSSFOG00015010205	pcbp3	95	96.463	ENSAPEG00000005209	-	97	96.463	Amphiprion_percula
ENSSFOG00015010205	pcbp3	100	94.328	ENSAPEG00000008011	pcbp3	100	90.341	Amphiprion_percula
ENSSFOG00015010205	pcbp3	95	96.141	ENSATEG00000009833	-	97	96.141	Anabas_testudineus
ENSSFOG00015010205	pcbp3	100	94.595	ENSATEG00000015787	-	100	94.595	Anabas_testudineus
ENSSFOG00015010205	pcbp3	98	80.000	ENSAPLG00000008951	-	78	80.000	Anas_platyrhynchos
ENSSFOG00015010205	pcbp3	93	93.082	ENSAPLG00000002975	-	95	93.082	Anas_platyrhynchos
ENSSFOG00015010205	pcbp3	98	90.173	ENSACAG00000004607	-	96	90.173	Anolis_carolinensis
ENSSFOG00015010205	pcbp3	98	86.769	ENSACAG00000009819	-	94	86.769	Anolis_carolinensis
ENSSFOG00015010205	pcbp3	90	96.491	ENSANAG00000030702	-	96	96.491	Aotus_nancymaae
ENSSFOG00015010205	pcbp3	100	98.165	ENSACLG00000003801	-	100	98.165	Astatotilapia_calliptera
ENSSFOG00015010205	pcbp3	100	94.030	ENSACLG00000011835	pcbp3	100	89.489	Astatotilapia_calliptera
ENSSFOG00015010205	pcbp3	100	96.697	ENSAMXG00000003440	pcbp3	100	92.000	Astyanax_mexicanus
ENSSFOG00015010205	pcbp3	95	93.204	ENSAMXG00000013588	-	100	93.204	Astyanax_mexicanus
ENSSFOG00015010205	pcbp3	98	65.896	ENSAMXG00000001760	zgc:110045	76	65.896	Astyanax_mexicanus
ENSSFOG00015010205	pcbp3	89	97.380	ENSCAFG00020019472	-	81	97.380	Canis_lupus_dingo
ENSSFOG00015010205	pcbp3	93	97.368	ENSCSAG00000007440	-	87	97.368	Chlorocebus_sabaeus
ENSSFOG00015010205	pcbp3	98	86.420	ENSCPBG00000000733	-	73	85.976	Chrysemys_picta_bellii
ENSSFOG00015010205	pcbp3	93	97.697	ENSCPBG00000012151	-	90	97.697	Chrysemys_picta_bellii
ENSSFOG00015010205	pcbp3	100	73.130	ENSCSEG00000016984	-	94	82.128	Cynoglossus_semilaevis
ENSSFOG00015010205	pcbp3	95	93.226	ENSCSEG00000000822	pcbp3	99	93.226	Cynoglossus_semilaevis
ENSSFOG00015010205	pcbp3	100	94.611	ENSCVAG00000014482	pcbp3	100	90.598	Cyprinodon_variegatus
ENSSFOG00015010205	pcbp3	100	97.859	ENSCVAG00000005262	-	100	97.859	Cyprinodon_variegatus
ENSSFOG00015010205	pcbp3	100	96.997	ENSDARG00000054378	pcbp3	97	96.997	Danio_rerio
ENSSFOG00015010205	pcbp3	93	82.895	ENSETEG00000015988	-	95	82.895	Echinops_telfairi
ENSSFOG00015010205	pcbp3	90	70.732	ENSEBUG00000005495	pcbp3	74	70.732	Eptatretus_burgeri
ENSSFOG00015010205	pcbp3	90	74.254	ENSEBUG00000016192	pcbp3	99	74.254	Eptatretus_burgeri
ENSSFOG00015010205	pcbp3	94	81.150	ENSEBUG00000007485	-	92	82.648	Eptatretus_burgeri
ENSSFOG00015010205	pcbp3	100	98.165	ENSELUG00000001560	-	91	98.165	Esox_lucius
ENSSFOG00015010205	pcbp3	100	94.345	ENSELUG00000003521	pcbp3	100	90.368	Esox_lucius
ENSSFOG00015010205	pcbp3	98	80.286	ENSFALG00000004411	-	74	80.286	Ficedula_albicollis
ENSSFOG00015010205	pcbp3	93	97.690	ENSFALG00000003949	-	95	97.690	Ficedula_albicollis
ENSSFOG00015010205	pcbp3	95	95.498	ENSFHEG00000006539	-	97	95.498	Fundulus_heteroclitus
ENSSFOG00015010205	pcbp3	97	93.354	ENSFHEG00000016615	pcbp3	97	93.354	Fundulus_heteroclitus
ENSSFOG00015010205	pcbp3	94	81.928	ENSGMOG00000011992	pcbp3	96	81.928	Gadus_morhua
ENSSFOG00015010205	pcbp3	99	68.182	ENSGMOG00000008611	-	100	70.997	Gadus_morhua
ENSSFOG00015010205	pcbp3	98	89.855	ENSGALG00000004394	-	98	90.217	Gallus_gallus
ENSSFOG00015010205	pcbp3	98	86.769	ENSGALG00000013155	-	98	86.196	Gallus_gallus
ENSSFOG00015010205	pcbp3	100	92.793	ENSGAFG00000011430	pcbp3	96	92.793	Gambusia_affinis
ENSSFOG00015010205	pcbp3	100	98.165	ENSGAFG00000010274	-	100	98.165	Gambusia_affinis
ENSSFOG00015010205	pcbp3	95	91.541	ENSGACG00000002266	-	97	91.541	Gasterosteus_aculeatus
ENSSFOG00015010205	pcbp3	100	81.250	ENSGACG00000014955	-	97	81.818	Gasterosteus_aculeatus
ENSSFOG00015010205	pcbp3	88	82.278	ENSGAGG00000006956	-	93	82.278	Gopherus_agassizii
ENSSFOG00015010205	pcbp3	89	90.226	ENSGAGG00000000271	-	100	90.226	Gopherus_agassizii
ENSSFOG00015010205	pcbp3	100	94.311	ENSHBUG00000010697	pcbp3	98	94.822	Haplochromis_burtoni
ENSSFOG00015010205	pcbp3	100	98.165	ENSHBUG00000021782	-	100	98.165	Haplochromis_burtoni
ENSSFOG00015010205	pcbp3	95	93.226	ENSHCOG00000006067	-	97	93.226	Hippocampus_comes
ENSSFOG00015010205	pcbp3	100	94.895	ENSHCOG00000017868	pcbp3	100	90.857	Hippocampus_comes
ENSSFOG00015010205	pcbp3	50	71.429	ENSIPUG00000003914	zgc:110045	88	71.429	Ictalurus_punctatus
ENSSFOG00015010205	pcbp3	100	96.096	ENSIPUG00000006238	pcbp3	97	96.096	Ictalurus_punctatus
ENSSFOG00015010205	pcbp3	100	94.328	ENSKMAG00000003046	pcbp3	100	90.341	Kryptolebias_marmoratus
ENSSFOG00015010205	pcbp3	100	97.859	ENSKMAG00000018530	-	100	97.859	Kryptolebias_marmoratus
ENSSFOG00015010205	pcbp3	96	93.610	ENSLBEG00000006201	pcbp3	96	93.610	Labrus_bergylta
ENSSFOG00015010205	pcbp3	100	82.530	ENSLBEG00000006542	-	100	82.530	Labrus_bergylta
ENSSFOG00015010205	pcbp3	98	88.506	ENSLACG00000010386	pcbp3	73	88.506	Latimeria_chalumnae
ENSSFOG00015010205	pcbp3	98	79.827	ENSLACG00000010804	zgc:110045	74	79.487	Latimeria_chalumnae
ENSSFOG00015010205	pcbp3	98	96.319	ENSLOCG00000009369	pcbp3	95	96.319	Lepisosteus_oculatus
ENSSFOG00015010205	pcbp3	98	86.111	ENSLOCG00000005058	zgc:110045	79	86.111	Lepisosteus_oculatus
ENSSFOG00015010205	pcbp3	95	95.146	ENSMAMG00000022336	pcbp3	93	95.146	Mastacembelus_armatus
ENSSFOG00015010205	pcbp3	95	94.855	ENSMAMG00000011620	-	97	94.855	Mastacembelus_armatus
ENSSFOG00015010205	pcbp3	100	94.294	ENSMZEG00005008993	pcbp3	98	93.994	Maylandia_zebra
ENSSFOG00015010205	pcbp3	100	89.053	ENSMZEG00005014882	-	100	89.053	Maylandia_zebra
ENSSFOG00015010205	pcbp3	98	80.286	ENSMGAG00000006794	-	74	80.286	Meleagris_gallopavo
ENSSFOG00015010205	pcbp3	98	79.769	ENSMGAG00000001883	-	96	81.556	Meleagris_gallopavo
ENSSFOG00015010205	pcbp3	95	95.498	ENSMMOG00000005216	-	97	95.498	Mola_mola
ENSSFOG00015010205	pcbp3	95	94.212	ENSMMOG00000000730	pcbp3	88	94.212	Mola_mola
ENSSFOG00015010205	pcbp3	75	87.850	ENSMODG00000027884	-	93	87.850	Monodelphis_domestica
ENSSFOG00015010205	pcbp3	99	94.294	ENSMALG00000000691	pcbp3	95	94.294	Monopterus_albus
ENSSFOG00015010205	pcbp3	93	85.139	ENSMPUG00000001779	-	88	85.139	Mustela_putorius_furo
ENSSFOG00015010205	pcbp3	99	90.533	ENSNBRG00000016714	-	100	89.053	Neolamprologus_brichardi
ENSSFOG00015010205	pcbp3	100	94.578	ENSNBRG00000016409	-	95	94.578	Neolamprologus_brichardi
ENSSFOG00015010205	pcbp3	99	88.506	ENSOPRG00000003431	-	99	88.506	Ochotona_princeps
ENSSFOG00015010205	pcbp3	100	89.489	ENSONIG00000012122	-	98	89.489	Oreochromis_niloticus
ENSSFOG00015010205	pcbp3	95	98.071	ENSONIG00000004611	-	97	98.071	Oreochromis_niloticus
ENSSFOG00015010205	pcbp3	93	97.360	ENSOCUG00000002696	-	87	97.360	Oryctolagus_cuniculus
ENSSFOG00015010205	pcbp3	99	97.546	ENSORLG00000022739	-	99	97.546	Oryzias_latipes
ENSSFOG00015010205	pcbp3	95	97.419	ENSORLG00000000059	pcbp3	100	97.419	Oryzias_latipes
ENSSFOG00015010205	pcbp3	95	97.419	ENSORLG00020012671	pcbp3	97	97.419	Oryzias_latipes_hni
ENSSFOG00015010205	pcbp3	99	97.239	ENSORLG00020006124	-	99	97.239	Oryzias_latipes_hni
ENSSFOG00015010205	pcbp3	99	97.546	ENSORLG00015008051	-	99	97.546	Oryzias_latipes_hsok
ENSSFOG00015010205	pcbp3	95	97.419	ENSORLG00015000429	pcbp3	97	97.419	Oryzias_latipes_hsok
ENSSFOG00015010205	pcbp3	90	96.441	ENSOMEG00000020811	pcbp3	97	96.441	Oryzias_melastigma
ENSSFOG00015010205	pcbp3	95	97.749	ENSOMEG00000020162	-	97	97.749	Oryzias_melastigma
ENSSFOG00015010205	pcbp3	98	83.476	ENSOGAG00000008044	-	96	84.241	Otolemur_garnettii
ENSSFOG00015010205	pcbp3	82	80.476	ENSPKIG00000020913	-	91	80.476	Paramormyrops_kingsleyae
ENSSFOG00015010205	pcbp3	100	99.387	ENSPKIG00000019329	pcbp3	100	99.387	Paramormyrops_kingsleyae
ENSSFOG00015010205	pcbp3	94	77.692	ENSPSIG00000008350	-	67	87.243	Pelodiscus_sinensis
ENSSFOG00015010205	pcbp3	93	83.489	ENSPSIG00000014970	-	95	84.112	Pelodiscus_sinensis
ENSSFOG00015010205	pcbp3	99	94.880	ENSPMGG00000022383	pcbp3	100	90.286	Periophthalmus_magnuspinnatus
ENSSFOG00015010205	pcbp3	94	74.760	ENSPMAG00000004551	pcbp3	90	74.760	Petromyzon_marinus
ENSSFOG00015010205	pcbp3	76	89.362	ENSPMAG00000004637	-	97	89.362	Petromyzon_marinus
ENSSFOG00015010205	pcbp3	98	95.399	ENSPCIG00000028092	-	95	95.399	Phascolarctos_cinereus
ENSSFOG00015010205	pcbp3	94	92.163	ENSPLAG00000004074	-	89	92.163	Poecilia_latipinna
ENSSFOG00015010205	pcbp3	100	88.286	ENSPLAG00000011449	pcbp3	100	76.441	Poecilia_latipinna
ENSSFOG00015010205	pcbp3	99	94.048	ENSPMEG00000021239	pcbp3	100	89.548	Poecilia_mexicana
ENSSFOG00015010205	pcbp3	100	89.759	ENSPMEG00000006653	-	100	89.118	Poecilia_mexicana
ENSSFOG00015010205	pcbp3	95	95.498	ENSPREG00000020585	-	97	95.498	Poecilia_reticulata
ENSSFOG00015010205	pcbp3	95	92.628	ENSPREG00000015736	pcbp3	99	92.628	Poecilia_reticulata
ENSSFOG00015010205	pcbp3	95	94.516	ENSPNYG00000012326	pcbp3	95	94.516	Pundamilia_nyererei
ENSSFOG00015010205	pcbp3	95	95.498	ENSPNYG00000013205	-	97	95.498	Pundamilia_nyererei
ENSSFOG00015010205	pcbp3	100	93.694	ENSPNAG00000008541	-	98	93.182	Pygocentrus_nattereri
ENSSFOG00015010205	pcbp3	95	98.392	ENSPNAG00000015104	pcbp3	97	98.392	Pygocentrus_nattereri
ENSSFOG00015010205	pcbp3	93	97.368	ENSRNOG00000001245	Pcbp3	95	97.368	Rattus_norvegicus
ENSSFOG00015010205	pcbp3	98	81.513	ENSRBIG00000028177	-	96	81.513	Rhinopithecus_bieti
ENSSFOG00015010205	pcbp3	93	91.641	ENSSHAG00000007890	-	96	91.641	Sarcophilus_harrisii
ENSSFOG00015010205	pcbp3	95	94.839	ENSSMAG00000011929	pcbp3	97	94.839	Scophthalmus_maximus
ENSSFOG00015010205	pcbp3	100	98.165	ENSSMAG00000003135	-	100	98.165	Scophthalmus_maximus
ENSSFOG00015010205	pcbp3	100	94.311	ENSSDUG00000011608	pcbp3	99	94.311	Seriola_dumerili
ENSSFOG00015010205	pcbp3	100	92.727	ENSSDUG00000008502	-	100	92.727	Seriola_dumerili
ENSSFOG00015010205	pcbp3	100	98.777	ENSSLDG00000020161	-	100	98.777	Seriola_lalandi_dorsalis
ENSSFOG00015010205	pcbp3	100	94.311	ENSSLDG00000008518	pcbp3	99	94.311	Seriola_lalandi_dorsalis
ENSSFOG00015010205	pcbp3	98	80.347	ENSSPUG00000013214	-	92	86.552	Sphenodon_punctatus
ENSSFOG00015010205	pcbp3	90	95.035	ENSSPAG00000004190	-	97	95.035	Stegastes_partitus
ENSSFOG00015010205	pcbp3	100	83.483	ENSSPAG00000023341	-	95	83.483	Stegastes_partitus
ENSSFOG00015010205	pcbp3	93	87.963	ENSTGUG00000003316	-	96	87.963	Taeniopygia_guttata
ENSSFOG00015010205	pcbp3	93	90.789	ENSTGUG00000008158	-	96	90.789	Taeniopygia_guttata
ENSSFOG00015010205	pcbp3	90	98.561	ENSTRUG00000006280	-	89	98.561	Takifugu_rubripes
ENSSFOG00015010205	pcbp3	100	91.765	ENSTRUG00000013604	pcbp3	100	91.765	Takifugu_rubripes
ENSSFOG00015010205	pcbp3	98	88.116	ENSTTRG00000015075	-	96	88.116	Tursiops_truncatus
ENSSFOG00015010205	pcbp3	93	89.506	ENSXETG00000011483	pcbp1	96	89.506	Xenopus_tropicalis
ENSSFOG00015010205	pcbp3	93	78.869	ENSXETG00000010491	pcbp2	74	78.869	Xenopus_tropicalis
ENSSFOG00015010205	pcbp3	99	94.048	ENSXCOG00000020481	pcbp3	100	89.548	Xiphophorus_couchianus
ENSSFOG00015010205	pcbp3	100	98.471	ENSXMAG00000028711	-	100	98.471	Xiphophorus_maculatus
ENSSFOG00015010205	pcbp3	100	94.328	ENSXMAG00000008175	pcbp3	100	90.341	Xiphophorus_maculatus