EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015010213 (Gene tree)
Gene ID: 108923806
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 8737 bases
Position: chrKV410829.1:376409-385145
Accession: 108923806
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015015856	KH_1	PF00013.29	7.2e-67	1	4
ENSSFOP00015015856	KH_1	PF00013.29	7.2e-67	2	4
ENSSFOP00015015856	KH_1	PF00013.29	7.2e-67	3	4
ENSSFOP00015015856	KH_1	PF00013.29	7.2e-67	4	4
ENSSFOP00015015891	KH_1	PF00013.29	8.5e-67	1	4
ENSSFOP00015015891	KH_1	PF00013.29	8.5e-67	2	4
ENSSFOP00015015891	KH_1	PF00013.29	8.5e-67	3	4
ENSSFOP00015015891	KH_1	PF00013.29	8.5e-67	4	4
ENSSFOP00015015829	KH_1	PF00013.29	8.9e-67	1	4
ENSSFOP00015015829	KH_1	PF00013.29	8.9e-67	2	4
ENSSFOP00015015829	KH_1	PF00013.29	8.9e-67	3	4
ENSSFOP00015015829	KH_1	PF00013.29	8.9e-67	4	4
ENSSFOP00015015856	KH_2	PF07650.17	6.6e-21	1	2
ENSSFOP00015015856	KH_2	PF07650.17	6.6e-21	2	2
ENSSFOP00015015891	KH_2	PF07650.17	7.6e-21	1	2
ENSSFOP00015015891	KH_2	PF07650.17	7.6e-21	2	2
ENSSFOP00015015829	KH_2	PF07650.17	7.9e-21	1	2
ENSSFOP00015015829	KH_2	PF07650.17	7.9e-21	2	2
ENSSFOP00015015891	DUF1897	PF09005.10	3.8e-14	1	2
ENSSFOP00015015891	DUF1897	PF09005.10	3.8e-14	2	2
ENSSFOP00015015829	DUF1897	PF09005.10	4.1e-14	1	2
ENSSFOP00015015829	DUF1897	PF09005.10	4.1e-14	2	2
ENSSFOP00015015856	DUF1897	PF09005.10	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015016034	-	2004	XM_018734786	ENSSFOP00015015856	632 (aa)	XP_018590302	-
ENSSFOT00015016013	-	2079	-	ENSSFOP00015015829	657 (aa)	-	-
ENSSFOT00015016075	-	2840	XM_018734781	ENSSFOP00015015891	652 (aa)	XP_018590297	-

Gene Model

Click here to download ENSSFOG00015010213's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015010213's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015010213	fubp1	58	39.560	ENSSFOG00015013231	PCBP2	79	39.560
ENSSFOG00015010213	fubp1	52	32.800	ENSSFOG00015010205	pcbp3	74	34.694
ENSSFOG00015010213	fubp1	50	34.694	ENSSFOG00015014706	pcbp3	84	35.870
ENSSFOG00015010213	fubp1	69	60.768	ENSSFOG00015010767	KHSRP	98	57.229
ENSSFOG00015010213	fubp1	52	34.118	ENSSFOG00015012075	PCBP4	69	34.118
ENSSFOG00015010213	fubp1	99	52.351	ENSSFOG00015012455	-	98	51.667
ENSSFOG00015010213	fubp1	96	51.794	ENSSFOG00015011098	fubp3	80	70.732
ENSSFOG00015010213	fubp1	97	52.454	ENSSFOG00015018719	khsrp	97	51.687

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015010213	fubp1	70	79.560	ENSG00000162613	FUBP1	100	73.025	Homo_sapiens
ENSSFOG00015010213	fubp1	100	78.045	ENSAPOG00000014845	fubp1	99	78.947	Acanthochromis_polyacanthus
ENSSFOG00015010213	fubp1	70	75.365	ENSAMEG00000007372	FUBP1	99	71.644	Ailuropoda_melanoleuca
ENSSFOG00015010213	fubp1	99	78.462	ENSACIG00000020024	fubp1	99	78.855	Amphilophus_citrinellus
ENSSFOG00015010213	fubp1	98	81.210	ENSAPEG00000012232	fubp1	99	79.936	Amphiprion_percula
ENSSFOG00015010213	fubp1	99	84.356	ENSATEG00000018619	fubp1	99	84.509	Anabas_testudineus
ENSSFOG00015010213	fubp1	65	80.482	ENSAPLG00000005965	FUBP1	99	73.623	Anas_platyrhynchos
ENSSFOG00015010213	fubp1	70	75.368	ENSACAG00000006310	FUBP1	95	71.870	Anolis_carolinensis
ENSSFOG00015010213	fubp1	99	84.462	ENSACLG00000006708	fubp1	99	83.871	Astatotilapia_calliptera
ENSSFOG00015010213	fubp1	86	88.743	ENSAMXG00000005525	fubp1	100	88.512	Astyanax_mexicanus
ENSSFOG00015010213	fubp1	70	79.341	ENSCJAG00000007062	FUBP1	100	72.985	Callithrix_jacchus
ENSSFOG00015010213	fubp1	70	79.167	ENSCAFG00000020361	FUBP1	100	72.876	Canis_familiaris
ENSSFOG00015010213	fubp1	65	79.808	ENSTSYG00000000148	FUBP1	100	72.583	Carlito_syrichta
ENSSFOG00015010213	fubp1	58	79.853	ENSCAPG00000011052	-	67	79.853	Cavia_aperea
ENSSFOG00015010213	fubp1	70	79.386	ENSCPOG00000002757	FUBP1	98	78.231	Cavia_porcellus
ENSSFOG00015010213	fubp1	76	63.510	ENSCCAG00000036537	FUBP1	100	64.368	Cebus_capucinus
ENSSFOG00015010213	fubp1	70	79.386	ENSCATG00000042126	FUBP1	100	73.025	Cercocebus_atys
ENSSFOG00015010213	fubp1	70	79.386	ENSCLAG00000005621	FUBP1	100	78.981	Chinchilla_lanigera
ENSSFOG00015010213	fubp1	70	79.386	ENSCSAG00000001402	FUBP1	100	73.025	Chlorocebus_sabaeus
ENSSFOG00015010213	fubp1	70	79.167	ENSCHOG00000008177	FUBP1	97	74.375	Choloepus_hoffmanni
ENSSFOG00015010213	fubp1	70	80.444	ENSCGRG00001007103	Fubp1	100	73.393	Cricetulus_griseus_chok1gshd
ENSSFOG00015010213	fubp1	65	80.529	ENSCGRG00000003372	Fubp1	98	77.551	Cricetulus_griseus_crigri
ENSSFOG00015010213	fubp1	98	83.494	ENSCSEG00000021412	fubp1	97	83.654	Cynoglossus_semilaevis
ENSSFOG00015010213	fubp1	99	83.282	ENSCVAG00000014487	fubp1	99	83.436	Cyprinodon_variegatus
ENSSFOG00015010213	fubp1	100	81.306	ENSDARG00000029248	fubp1	100	81.899	Danio_rerio
ENSSFOG00015010213	fubp1	81	57.534	ENSDNOG00000034565	-	83	56.550	Dasypus_novemcinctus
ENSSFOG00015010213	fubp1	70	79.386	ENSDORG00000016534	Fubp1	97	74.375	Dipodomys_ordii
ENSSFOG00015010213	fubp1	75	78.488	ENSETEG00000000948	-	58	78.488	Echinops_telfairi
ENSSFOG00015010213	fubp1	82	51.412	ENSEBUG00000016143	fubp1	63	69.643	Eptatretus_burgeri
ENSSFOG00015010213	fubp1	70	88.889	ENSEEUG00000001287	FUBP1	74	89.655	Erinaceus_europaeus
ENSSFOG00015010213	fubp1	99	85.303	ENSELUG00000007990	fubp1	99	85.984	Esox_lucius
ENSSFOG00015010213	fubp1	70	79.029	ENSFALG00000005768	FUBP1	96	73.155	Ficedula_albicollis
ENSSFOG00015010213	fubp1	70	79.167	ENSFDAG00000014210	FUBP1	100	77.551	Fukomys_damarensis
ENSSFOG00015010213	fubp1	99	83.282	ENSFHEG00000005230	fubp1	99	83.436	Fundulus_heteroclitus
ENSSFOG00015010213	fubp1	99	77.727	ENSGMOG00000003370	fubp1	99	77.302	Gadus_morhua
ENSSFOG00015010213	fubp1	70	79.075	ENSGALG00000008939	FUBP1	100	71.300	Gallus_gallus
ENSSFOG00015010213	fubp1	99	81.599	ENSGAFG00000020972	fubp1	99	81.750	Gambusia_affinis
ENSSFOG00015010213	fubp1	99	80.335	ENSGACG00000016563	fubp1	99	80.157	Gasterosteus_aculeatus
ENSSFOG00015010213	fubp1	99	84.615	ENSHBUG00000009835	fubp1	99	84.154	Haplochromis_burtoni
ENSSFOG00015010213	fubp1	99	63.581	ENSHGLG00000002808	-	72	73.510	Heterocephalus_glaber_female
ENSSFOG00015010213	fubp1	70	79.386	ENSHGLG00000008415	-	100	78.981	Heterocephalus_glaber_female
ENSSFOG00015010213	fubp1	70	79.386	ENSHGLG00100003417	-	100	72.552	Heterocephalus_glaber_male
ENSSFOG00015010213	fubp1	99	64.340	ENSHGLG00100001414	-	71	75.839	Heterocephalus_glaber_male
ENSSFOG00015010213	fubp1	99	81.287	ENSHCOG00000000910	fubp1	99	82.186	Hippocampus_comes
ENSSFOG00015010213	fubp1	100	85.714	ENSIPUG00000009896	fubp1	100	86.474	Ictalurus_punctatus
ENSSFOG00015010213	fubp1	70	79.778	ENSSTOG00000014312	FUBP1	99	74.335	Ictidomys_tridecemlineatus
ENSSFOG00015010213	fubp1	70	79.379	ENSJJAG00000020069	Fubp1	100	77.551	Jaculus_jaculus
ENSSFOG00015010213	fubp1	99	83.206	ENSKMAG00000018897	fubp1	99	83.359	Kryptolebias_marmoratus
ENSSFOG00015010213	fubp1	99	80.000	ENSLBEG00000012700	fubp1	97	81.493	Labrus_bergylta
ENSSFOG00015010213	fubp1	98	88.671	ENSLOCG00000003745	fubp1	100	87.040	Lepisosteus_oculatus
ENSSFOG00015010213	fubp1	70	76.000	ENSLAFG00000003273	FUBP1	99	74.132	Loxodonta_africana
ENSSFOG00015010213	fubp1	70	79.560	ENSMFAG00000031825	FUBP1	100	73.134	Macaca_fascicularis
ENSSFOG00015010213	fubp1	70	80.000	ENSMMUG00000002899	FUBP1	100	73.025	Macaca_mulatta
ENSSFOG00015010213	fubp1	70	79.386	ENSMNEG00000045212	FUBP1	100	73.025	Macaca_nemestrina
ENSSFOG00015010213	fubp1	99	83.056	ENSMAMG00000007489	fubp1	99	83.056	Mastacembelus_armatus
ENSSFOG00015010213	fubp1	99	84.462	ENSMZEG00005024298	fubp1	99	84.000	Maylandia_zebra
ENSSFOG00015010213	fubp1	65	80.048	ENSMGAG00000009424	FUBP1	100	71.474	Meleagris_gallopavo
ENSSFOG00015010213	fubp1	70	79.386	ENSMAUG00000016428	Fubp1	98	78.231	Mesocricetus_auratus
ENSSFOG00015010213	fubp1	70	79.867	ENSMOCG00000014751	Fubp1	98	77.551	Microtus_ochrogaster
ENSSFOG00015010213	fubp1	86	82.092	ENSMMOG00000019463	fubp1	98	81.516	Mola_mola
ENSSFOG00015010213	fubp1	67	72.545	ENSMODG00000020804	FUBP1	99	69.462	Monodelphis_domestica
ENSSFOG00015010213	fubp1	99	83.257	ENSMALG00000015173	fubp1	99	83.410	Monopterus_albus
ENSSFOG00015010213	fubp1	70	79.823	MGP_CAROLIEiJ_G0025740	Fubp1	99	78.667	Mus_caroli
ENSSFOG00015010213	fubp1	70	79.601	ENSMUSG00000028034	Fubp1	99	78.476	Mus_musculus
ENSSFOG00015010213	fubp1	70	79.646	MGP_PahariEiJ_G0027191	Fubp1	99	78.517	Mus_pahari
ENSSFOG00015010213	fubp1	70	79.823	MGP_SPRETEiJ_G0026693	Fubp1	99	78.667	Mus_spretus
ENSSFOG00015010213	fubp1	70	75.208	ENSMLUG00000014802	FUBP1	100	70.014	Myotis_lucifugus
ENSSFOG00015010213	fubp1	91	74.723	ENSNGAG00000014302	Fubp1	98	77.551	Nannospalax_galili
ENSSFOG00015010213	fubp1	98	80.769	ENSNBRG00000015099	fubp1	99	79.487	Neolamprologus_brichardi
ENSSFOG00015010213	fubp1	70	75.930	ENSNLEG00000009772	FUBP1	100	71.025	Nomascus_leucogenys
ENSSFOG00015010213	fubp1	69	88.679	ENSOPRG00000001175	FUBP1	90	71.182	Ochotona_princeps
ENSSFOG00015010213	fubp1	70	79.386	ENSODEG00000002600	-	100	77.551	Octodon_degus
ENSSFOG00015010213	fubp1	99	55.906	ENSODEG00000003657	-	99	53.071	Octodon_degus
ENSSFOG00015010213	fubp1	99	84.615	ENSONIG00000018381	fubp1	99	83.175	Oreochromis_niloticus
ENSSFOG00015010213	fubp1	60	81.510	ENSOANG00000009777	FUBP1	99	74.632	Ornithorhynchus_anatinus
ENSSFOG00015010213	fubp1	98	79.647	ENSORLG00000003540	fubp1	99	79.167	Oryzias_latipes
ENSSFOG00015010213	fubp1	99	82.165	ENSORLG00020005908	fubp1	99	78.846	Oryzias_latipes_hni
ENSSFOG00015010213	fubp1	99	82.192	ENSORLG00015008779	fubp1	99	81.962	Oryzias_latipes_hsok
ENSSFOG00015010213	fubp1	99	82.290	ENSOMEG00000021943	fubp1	97	82.901	Oryzias_melastigma
ENSSFOG00015010213	fubp1	70	75.052	ENSOGAG00000014233	FUBP1	99	71.364	Otolemur_garnettii
ENSSFOG00015010213	fubp1	70	79.341	ENSOARG00000013259	FUBP1	100	75.075	Ovis_aries
ENSSFOG00015010213	fubp1	70	79.167	ENSPPRG00000000413	FUBP1	100	72.876	Panthera_pardus
ENSSFOG00015010213	fubp1	70	79.167	ENSPTIG00000019450	FUBP1	100	72.876	Panthera_tigris_altaica
ENSSFOG00015010213	fubp1	66	80.095	ENSPSIG00000012965	FUBP1	99	74.446	Pelodiscus_sinensis
ENSSFOG00015010213	fubp1	97	80.892	ENSPMGG00000009060	fubp1	98	76.997	Periophthalmus_magnuspinnatus
ENSSFOG00015010213	fubp1	70	79.823	ENSPEMG00000021802	Fubp1	100	77.551	Peromyscus_maniculatus_bairdii
ENSSFOG00015010213	fubp1	64	58.009	ENSPMAG00000001644	-	93	58.009	Petromyzon_marinus
ENSSFOG00015010213	fubp1	99	82.975	ENSPFOG00000000238	fubp1	99	83.129	Poecilia_formosa
ENSSFOG00015010213	fubp1	98	82.051	ENSPLAG00000021170	fubp1	99	81.106	Poecilia_latipinna
ENSSFOG00015010213	fubp1	99	79.661	ENSPMEG00000004747	fubp1	99	85.000	Poecilia_mexicana
ENSSFOG00015010213	fubp1	99	82.975	ENSPREG00000017911	fubp1	99	83.129	Poecilia_reticulata
ENSSFOG00015010213	fubp1	77	78.970	ENSPPYG00000001219	-	68	79.691	Pongo_abelii
ENSSFOG00015010213	fubp1	70	79.121	ENSPCAG00000012617	FUBP1	97	74.178	Procavia_capensis
ENSSFOG00015010213	fubp1	70	79.167	ENSPCOG00000024974	FUBP1	100	72.876	Propithecus_coquereli
ENSSFOG00015010213	fubp1	70	72.807	ENSPVAG00000014637	FUBP1	97	69.688	Pteropus_vampyrus
ENSSFOG00015010213	fubp1	99	84.462	ENSPNYG00000004552	fubp1	99	84.000	Pundamilia_nyererei
ENSSFOG00015010213	fubp1	100	87.879	ENSPNAG00000016207	fubp1	100	88.333	Pygocentrus_nattereri
ENSSFOG00015010213	fubp1	70	79.823	ENSRNOG00000043370	Fubp1	100	72.795	Rattus_norvegicus
ENSSFOG00015010213	fubp1	70	79.386	ENSRBIG00000042950	FUBP1	100	73.025	Rhinopithecus_bieti
ENSSFOG00015010213	fubp1	70	79.386	ENSRROG00000043534	FUBP1	100	73.025	Rhinopithecus_roxellana
ENSSFOG00015010213	fubp1	70	79.167	ENSSBOG00000027299	FUBP1	100	72.876	Saimiri_boliviensis_boliviensis
ENSSFOG00015010213	fubp1	65	79.048	ENSSHAG00000005367	FUBP1	99	74.824	Sarcophilus_harrisii
ENSSFOG00015010213	fubp1	99	80.269	ENSSMAG00000012029	fubp1	97	81.493	Scophthalmus_maximus
ENSSFOG00015010213	fubp1	99	83.107	ENSSDUG00000007383	fubp1	97	83.258	Seriola_dumerili
ENSSFOG00015010213	fubp1	99	83.107	ENSSLDG00000022863	fubp1	97	83.258	Seriola_lalandi_dorsalis
ENSSFOG00015010213	fubp1	82	87.234	ENSSARG00000011730	FUBP1	67	88.043	Sorex_araneus
ENSSFOG00015010213	fubp1	99	71.733	ENSSPUG00000008389	FUBP1	99	70.839	Sphenodon_punctatus
ENSSFOG00015010213	fubp1	99	84.946	ENSSPAG00000010161	fubp1	99	84.332	Stegastes_partitus
ENSSFOG00015010213	fubp1	65	79.572	ENSTGUG00000006841	FUBP1	99	73.058	Taeniopygia_guttata
ENSSFOG00015010213	fubp1	99	78.635	ENSTRUG00000004615	fubp1	99	78.783	Takifugu_rubripes
ENSSFOG00015010213	fubp1	77	84.524	ENSTBEG00000017333	FUBP1	59	86.310	Tupaia_belangeri
ENSSFOG00015010213	fubp1	70	79.167	ENSTTRG00000000096	FUBP1	97	74.062	Tursiops_truncatus
ENSSFOG00015010213	fubp1	70	79.167	ENSVPAG00000004709	FUBP1	98	74.062	Vicugna_pacos
ENSSFOG00015010213	fubp1	98	77.424	ENSXCOG00000019354	fubp1	99	76.312	Xiphophorus_couchianus
ENSSFOG00015010213	fubp1	92	84.718	ENSXMAG00000007168	fubp1	99	84.833	Xiphophorus_maculatus