EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015010354 (Gene tree)
Gene ID: 108918403
Gene Symbol: apex2
Alias: zgc:55889
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 2
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 7200 bases
Position: chrKV411252.1:5237763-5244962
Accession: 108918403
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015016071	Exo_endo_phos	PF03372.23	3.2e-16	1	1
ENSSFOP00015016039	Exo_endo_phos	PF03372.23	4.1e-16	1	1
ENSSFOP00015016049	Exo_endo_phos	PF03372.23	2.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015016257	-	1548	-	ENSSFOP00015016071	515 (aa)	-	-
ENSSFOT00015016225	-	4083	XM_018725558	ENSSFOP00015016039	582 (aa)	XP_018581074	A0A1W4XND6
ENSSFOT00015016235	-	4610	-	ENSSFOP00015016049	551 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015010354's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015010354's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015010354	apex2	99	49.543	ENSG00000169188	APEX2	99	48.263	Homo_sapiens
ENSSFOG00015010354	apex2	100	63.588	ENSAPOG00000005805	apex2	87	86.567	Acanthochromis_polyacanthus
ENSSFOG00015010354	apex2	99	48.535	ENSAMEG00000003608	APEX2	99	47.436	Ailuropoda_melanoleuca
ENSSFOG00015010354	apex2	100	63.894	ENSACIG00000010000	apex2	100	63.356	Amphilophus_citrinellus
ENSSFOG00015010354	apex2	100	63.588	ENSAOCG00000021774	apex2	87	86.567	Amphiprion_ocellaris
ENSSFOG00015010354	apex2	100	63.233	ENSAPEG00000020890	apex2	82	86.567	Amphiprion_percula
ENSSFOG00015010354	apex2	100	62.692	ENSATEG00000023600	apex2	85	85.075	Anabas_testudineus
ENSSFOG00015010354	apex2	99	51.619	ENSACAG00000011201	APEX2	99	52.308	Anolis_carolinensis
ENSSFOG00015010354	apex2	99	49.726	ENSANAG00000021907	-	99	48.995	Aotus_nancymaae
ENSSFOG00015010354	apex2	97	44.444	ENSANAG00000020845	-	99	44.256	Aotus_nancymaae
ENSSFOG00015010354	apex2	100	63.604	ENSAMXG00000007422	apex2	100	64.093	Astyanax_mexicanus
ENSSFOG00015010354	apex2	99	49.540	ENSBTAG00000013177	APEX2	99	48.807	Bos_taurus
ENSSFOG00015010354	apex2	99	48.812	ENSCJAG00000016584	APEX2	99	48.629	Callithrix_jacchus
ENSSFOG00015010354	apex2	99	47.059	ENSCAFG00000014310	APEX2	99	46.140	Canis_familiaris
ENSSFOG00015010354	apex2	99	47.978	ENSCAFG00020013818	APEX2	93	60.268	Canis_lupus_dingo
ENSSFOG00015010354	apex2	99	48.619	ENSCHIG00000019916	APEX2	99	48.619	Capra_hircus
ENSSFOG00015010354	apex2	99	49.451	ENSTSYG00000005612	APEX2	99	49.084	Carlito_syrichta
ENSSFOG00015010354	apex2	99	47.004	ENSCPOG00000007265	APEX2	99	46.992	Cavia_porcellus
ENSSFOG00015010354	apex2	96	45.051	ENSCCAG00000025405	-	96	45.051	Cebus_capucinus
ENSSFOG00015010354	apex2	99	48.995	ENSCATG00000044854	APEX2	99	48.080	Cercocebus_atys
ENSSFOG00015010354	apex2	99	47.349	ENSCLAG00000017315	APEX2	99	46.461	Chinchilla_lanigera
ENSSFOG00015010354	apex2	99	48.905	ENSCSAG00000012124	APEX2	99	47.993	Chlorocebus_sabaeus
ENSSFOG00015010354	apex2	100	47.628	ENSCPBG00000016631	APEX2	99	48.008	Chrysemys_picta_bellii
ENSSFOG00015010354	apex2	99	44.894	ENSCSAVG00000006052	-	87	58.730	Ciona_savignyi
ENSSFOG00015010354	apex2	99	49.177	ENSCANG00000003053	APEX2	99	48.263	Colobus_angolensis_palliatus
ENSSFOG00015010354	apex2	99	48.812	ENSCGRG00001008132	Apex2	99	48.263	Cricetulus_griseus_chok1gshd
ENSSFOG00015010354	apex2	99	48.812	ENSCGRG00000009667	Apex2	86	63.507	Cricetulus_griseus_crigri
ENSSFOG00015010354	apex2	100	74.026	ENSCSEG00000019900	apex2	85	83.077	Cynoglossus_semilaevis
ENSSFOG00015010354	apex2	96	71.429	ENSCVAG00000021583	apex2	85	80.000	Cyprinodon_variegatus
ENSSFOG00015010354	apex2	100	62.032	ENSDARG00000008472	apex2	100	61.607	Danio_rerio
ENSSFOG00015010354	apex2	99	46.618	ENSDNOG00000038901	APEX2	99	46.196	Dasypus_novemcinctus
ENSSFOG00015010354	apex2	99	48.851	ENSEBUG00000015654	apex2	87	64.062	Eptatretus_burgeri
ENSSFOG00015010354	apex2	99	49.631	ENSEASG00005011694	APEX2	90	48.893	Equus_asinus_asinus
ENSSFOG00015010354	apex2	99	49.631	ENSECAG00000026921	APEX2	90	48.893	Equus_caballus
ENSSFOG00015010354	apex2	99	48.609	ENSEEUG00000013172	APEX2	99	48.052	Erinaceus_europaeus
ENSSFOG00015010354	apex2	100	62.995	ENSELUG00000021417	apex2	84	81.818	Esox_lucius
ENSSFOG00015010354	apex2	99	47.890	ENSFCAG00000021990	APEX2	99	47.156	Felis_catus
ENSSFOG00015010354	apex2	99	47.532	ENSFDAG00000008076	APEX2	90	62.736	Fukomys_damarensis
ENSSFOG00015010354	apex2	100	57.754	ENSFHEG00000021411	apex2	99	56.962	Fundulus_heteroclitus
ENSSFOG00015010354	apex2	64	73.846	ENSGMOG00000019681	apex2	100	73.846	Gadus_morhua
ENSSFOG00015010354	apex2	100	62.887	ENSGAFG00000005829	apex2	84	80.000	Gambusia_affinis
ENSSFOG00015010354	apex2	65	82.857	ENSGACG00000012307	apex2	91	82.857	Gasterosteus_aculeatus
ENSSFOG00015010354	apex2	96	44.549	ENSGAGG00000011520	APEX2	88	44.578	Gopherus_agassizii
ENSSFOG00015010354	apex2	99	49.360	ENSGGOG00000002056	APEX2	99	48.080	Gorilla_gorilla
ENSSFOG00015010354	apex2	84	84.286	ENSHBUG00000009938	apex2	92	87.692	Haplochromis_burtoni
ENSSFOG00015010354	apex2	99	48.411	ENSHGLG00000000273	APEX2	96	59.375	Heterocephalus_glaber_female
ENSSFOG00015010354	apex2	100	63.051	ENSHCOG00000010165	apex2	100	63.051	Hippocampus_comes
ENSSFOG00015010354	apex2	94	83.077	ENSIPUG00000000352	APEX2	84	83.077	Ictalurus_punctatus
ENSSFOG00015010354	apex2	99	48.723	ENSSTOG00000025121	APEX2	86	63.679	Ictidomys_tridecemlineatus
ENSSFOG00015010354	apex2	99	49.545	ENSJJAG00000019611	Apex2	93	64.953	Jaculus_jaculus
ENSSFOG00015010354	apex2	100	64.464	ENSKMAG00000006985	apex2	100	62.254	Kryptolebias_marmoratus
ENSSFOG00015010354	apex2	100	62.937	ENSLBEG00000012139	apex2	85	80.597	Labrus_bergylta
ENSSFOG00015010354	apex2	100	53.707	ENSLACG00000000865	APEX2	100	53.832	Latimeria_chalumnae
ENSSFOG00015010354	apex2	100	61.511	ENSLOCG00000014467	apex2	100	61.785	Lepisosteus_oculatus
ENSSFOG00015010354	apex2	99	48.905	ENSLAFG00000018312	APEX2	99	48.080	Loxodonta_africana
ENSSFOG00015010354	apex2	99	49.360	ENSMFAG00000002486	APEX2	99	48.446	Macaca_fascicularis
ENSSFOG00015010354	apex2	99	49.360	ENSMMUG00000008428	APEX2	99	48.446	Macaca_mulatta
ENSSFOG00015010354	apex2	99	49.543	ENSMNEG00000036783	APEX2	99	48.629	Macaca_nemestrina
ENSSFOG00015010354	apex2	99	48.995	ENSMLEG00000028208	APEX2	99	48.080	Mandrillus_leucophaeus
ENSSFOG00015010354	apex2	99	77.922	ENSMAMG00000024220	apex2	87	87.692	Mastacembelus_armatus
ENSSFOG00015010354	apex2	84	82.857	ENSMZEG00005026322	apex2	92	86.154	Maylandia_zebra
ENSSFOG00015010354	apex2	99	46.069	ENSMICG00000043181	APEX2	99	44.790	Microcebus_murinus
ENSSFOG00015010354	apex2	99	48.619	ENSMOCG00000004339	Apex2	88	63.033	Microtus_ochrogaster
ENSSFOG00015010354	apex2	95	81.429	ENSMMOG00000017340	apex2	85	84.615	Mola_mola
ENSSFOG00015010354	apex2	99	54.127	ENSMODG00000005341	APEX2	88	74.194	Monodelphis_domestica
ENSSFOG00015010354	apex2	98	76.623	ENSMALG00000014179	apex2	84	86.154	Monopterus_albus
ENSSFOG00015010354	apex2	99	48.073	MGP_CAROLIEiJ_G0033484	Apex2	100	54.093	Mus_caroli
ENSSFOG00015010354	apex2	99	48.624	ENSMUSG00000025269	Apex2	99	54.093	Mus_musculus
ENSSFOG00015010354	apex2	99	47.993	MGP_PahariEiJ_G0032023	Apex2	96	62.212	Mus_pahari
ENSSFOG00015010354	apex2	99	49.533	MGP_SPRETEiJ_G0034654	Apex2	100	54.093	Mus_spretus
ENSSFOG00015010354	apex2	99	48.991	ENSMPUG00000003293	APEX2	99	48.073	Mustela_putorius_furo
ENSSFOG00015010354	apex2	99	48.045	ENSMLUG00000004562	-	99	47.486	Myotis_lucifugus
ENSSFOG00015010354	apex2	99	49.446	ENSMLUG00000016298	-	90	63.333	Myotis_lucifugus
ENSSFOG00015010354	apex2	99	46.886	ENSNGAG00000013576	Apex2	99	46.703	Nannospalax_galili
ENSSFOG00015010354	apex2	100	62.478	ENSNBRG00000010099	apex2	100	62.014	Neolamprologus_brichardi
ENSSFOG00015010354	apex2	78	56.716	ENSNLEG00000032067	-	75	63.333	Nomascus_leucogenys
ENSSFOG00015010354	apex2	99	66.165	ENSONIG00000016881	apex2	99	65.977	Oreochromis_niloticus
ENSSFOG00015010354	apex2	99	53.016	ENSOANG00000000689	-	96	56.942	Ornithorhynchus_anatinus
ENSSFOG00015010354	apex2	82	63.333	ENSOCUG00000000570	APEX2	99	42.115	Oryctolagus_cuniculus
ENSSFOG00015010354	apex2	100	63.993	ENSORLG00000014053	apex2	100	63.993	Oryzias_latipes
ENSSFOG00015010354	apex2	100	63.636	ENSORLG00020013253	apex2	100	63.636	Oryzias_latipes_hni
ENSSFOG00015010354	apex2	100	63.636	ENSORLG00015007515	apex2	100	63.636	Oryzias_latipes_hsok
ENSSFOG00015010354	apex2	100	63.489	ENSOMEG00000003655	apex2	100	62.770	Oryzias_melastigma
ENSSFOG00015010354	apex2	99	48.263	ENSOGAG00000007797	APEX2	85	63.333	Otolemur_garnettii
ENSSFOG00015010354	apex2	99	48.619	ENSOARG00000005742	APEX2	99	48.619	Ovis_aries
ENSSFOG00015010354	apex2	99	49.909	ENSPPAG00000035747	APEX2	99	48.629	Pan_paniscus
ENSSFOG00015010354	apex2	99	47.706	ENSPPRG00000002440	APEX2	99	46.789	Panthera_pardus
ENSSFOG00015010354	apex2	99	47.706	ENSPTIG00000021651	APEX2	99	46.789	Panthera_tigris_altaica
ENSSFOG00015010354	apex2	99	49.726	ENSPTRG00000021946	APEX2	99	48.446	Pan_troglodytes
ENSSFOG00015010354	apex2	99	48.995	ENSPANG00000003595	APEX2	99	48.080	Papio_anubis
ENSSFOG00015010354	apex2	100	66.607	ENSPKIG00000007752	apex2	100	66.964	Paramormyrops_kingsleyae
ENSSFOG00015010354	apex2	100	63.652	ENSPMGG00000009151	apex2	100	63.766	Periophthalmus_magnuspinnatus
ENSSFOG00015010354	apex2	99	48.629	ENSPEMG00000016475	Apex2	89	61.009	Peromyscus_maniculatus_bairdii
ENSSFOG00015010354	apex2	82	74.194	ENSPCIG00000007633	APEX2	98	53.077	Phascolarctos_cinereus
ENSSFOG00015010354	apex2	100	63.058	ENSPFOG00000000408	apex2	84	81.538	Poecilia_formosa
ENSSFOG00015010354	apex2	100	63.230	ENSPLAG00000023814	apex2	84	81.538	Poecilia_latipinna
ENSSFOG00015010354	apex2	100	63.230	ENSPMEG00000023222	apex2	84	83.077	Poecilia_mexicana
ENSSFOG00015010354	apex2	99	49.360	ENSPPYG00000020388	APEX2	99	48.446	Pongo_abelii
ENSSFOG00015010354	apex2	99	48.540	ENSPCOG00000016083	APEX2	99	48.175	Propithecus_coquereli
ENSSFOG00015010354	apex2	98	45.185	ENSPVAG00000007851	APEX2	99	46.856	Pteropus_vampyrus
ENSSFOG00015010354	apex2	100	63.410	ENSPNYG00000015698	apex2	100	62.943	Pundamilia_nyererei
ENSSFOG00015010354	apex2	97	82.192	ENSPNAG00000011666	apex2	84	89.231	Pygocentrus_nattereri
ENSSFOG00015010354	apex2	99	47.628	ENSRNOG00000000166	Apex2	99	47.706	Rattus_norvegicus
ENSSFOG00015010354	apex2	99	49.360	ENSRBIG00000036500	APEX2	99	48.080	Rhinopithecus_bieti
ENSSFOG00015010354	apex2	99	49.360	ENSRROG00000032674	APEX2	99	48.080	Rhinopithecus_roxellana
ENSSFOG00015010354	apex2	67	45.098	YBL019W	APN2	80	45.098	Saccharomyces_cerevisiae
ENSSFOG00015010354	apex2	99	48.995	ENSSBOG00000030500	-	99	48.995	Saimiri_boliviensis_boliviensis
ENSSFOG00015010354	apex2	96	41.815	ENSSBOG00000003489	-	96	40.625	Saimiri_boliviensis_boliviensis
ENSSFOG00015010354	apex2	99	54.423	ENSSHAG00000007846	APEX2	85	73.770	Sarcophilus_harrisii
ENSSFOG00015010354	apex2	100	64.664	ENSSMAG00000012753	apex2	100	63.845	Scophthalmus_maximus
ENSSFOG00015010354	apex2	98	77.922	ENSSDUG00000022892	apex2	85	83.582	Seriola_dumerili
ENSSFOG00015010354	apex2	98	77.922	ENSSLDG00000024347	apex2	99	83.582	Seriola_lalandi_dorsalis
ENSSFOG00015010354	apex2	99	48.598	ENSSARG00000010297	APEX2	99	47.802	Sorex_araneus
ENSSFOG00015010354	apex2	100	65.426	ENSSPAG00000016279	apex2	100	63.830	Stegastes_partitus
ENSSFOG00015010354	apex2	99	49.358	ENSSSCG00000012348	-	99	48.991	Sus_scrofa
ENSSFOG00015010354	apex2	100	63.458	ENSTRUG00000015660	apex2	87	84.615	Takifugu_rubripes
ENSSFOG00015010354	apex2	90	58.250	ENSTNIG00000003725	apex2	87	84.375	Tetraodon_nigroviridis
ENSSFOG00015010354	apex2	98	45.640	ENSTBEG00000010520	APEX2	83	68.333	Tupaia_belangeri
ENSSFOG00015010354	apex2	99	48.440	ENSUAMG00000004720	APEX2	93	60.714	Ursus_americanus
ENSSFOG00015010354	apex2	99	45.772	ENSUMAG00000002892	APEX2	99	45.588	Ursus_maritimus
ENSSFOG00015010354	apex2	99	47.794	ENSVVUG00000005989	APEX2	99	46.875	Vulpes_vulpes
ENSSFOG00015010354	apex2	83	75.000	ENSXETG00000022026	apex2	91	75.000	Xenopus_tropicalis
ENSSFOG00015010354	apex2	100	63.527	ENSXMAG00000025740	apex2	84	80.000	Xiphophorus_maculatus