EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSFOG00015010470 (Gene tree)
Gene ID
108935239
Gene Symbol
u2surp
Alias
mp:zf637-1-000918|si:dkey-181m9.9|wu:fa03e02|wu:fb38b01|wu:fc75d03
Full Name
U2 snRNP associated SURP domain containing
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Plus strand
Length
12504 bases
Position
chrKV411097.1:3520568-3533071
Accession
108935239
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015016277cwf21PF08312.126.4e-1111
ENSSFOP00015016232cwf21PF08312.126.6e-1111
ENSSFOP00015016277RRM_1PF00076.228.6e-1511
ENSSFOP00015016232RRM_1PF00076.229e-1511
ENSSFOP00015016277SurpPF01805.204.6e-1911
ENSSFOP00015016232SurpPF01805.204.9e-1911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015016418-3786XM_018753693ENSSFOP00015016232972 (aa)XP_018609209-
ENSSFOT00015016464-3701-ENSSFOP00015016277944 (aa)--
Gene Model
Click here to download ENSSFOG00015010470's gene model file
Pathways
Pathway IDPathway NameSource
sfm03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015010470's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSFOG00015010470u2surp9451.690ENSSFOG00015004962zgc:1630989853.432
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015010470u2surp9675.131ENSG00000163714U2SURP8576.697Homo_sapiens
ENSSFOG00015010470u2surp9278.440ENSAPOG00000011345u2surp9180.313Acanthochromis_polyacanthus
ENSSFOG00015010470u2surp9675.131ENSAMEG00000012757U2SURP8576.697Ailuropoda_melanoleuca
ENSSFOG00015010470u2surp9278.270ENSACIG00000018537u2surp9580.357Amphilophus_citrinellus
ENSSFOG00015010470u2surp8649.523ENSACIG00000011968zgc:1630989849.186Amphilophus_citrinellus
ENSSFOG00015010470u2surp9277.826ENSAOCG00000003589u2surp9179.402Amphiprion_ocellaris
ENSSFOG00015010470u2surp8654.176ENSAOCG00000008482zgc:1630989852.544Amphiprion_ocellaris
ENSSFOG00015010470u2surp9277.072ENSAPEG00000016652u2surp9180.116Amphiprion_percula
ENSSFOG00015010470u2surp8654.176ENSAPEG00000001348zgc:1630989852.544Amphiprion_percula
ENSSFOG00015010470u2surp8977.318ENSATEG00000006321u2surp9179.354Anabas_testudineus
ENSSFOG00015010470u2surp7754.473ENSATEG00000016576zgc:1630989055.110Anabas_testudineus
ENSSFOG00015010470u2surp9575.761ENSAPLG00000002348U2SURP9177.551Anas_platyrhynchos
ENSSFOG00015010470u2surp9773.913ENSACAG00000009512U2SURP8775.599Anolis_carolinensis
ENSSFOG00015010470u2surp9676.402ENSANAG00000035774U2SURP9077.918Aotus_nancymaae
ENSSFOG00015010470u2surp9278.817ENSACLG00000027507u2surp9180.200Astatotilapia_calliptera
ENSSFOG00015010470u2surp9151.724ENSACLG00000016647zgc:1630989153.806Astatotilapia_calliptera
ENSSFOG00015010470u2surp8253.713ENSAMXG00000005081zgc:1630989751.796Astyanax_mexicanus
ENSSFOG00015010470u2surp8382.460ENSAMXG00000006189u2surp8882.683Astyanax_mexicanus
ENSSFOG00015010470u2surp7339.714WBGene00015581C07H6.47639.823Caenorhabditis_elegans
ENSSFOG00015010470u2surp9675.314ENSCJAG00000001639U2SURP9073.696Callithrix_jacchus
ENSSFOG00015010470u2surp9675.314ENSCAFG00000007973U2SURP8576.897Canis_familiaris
ENSSFOG00015010470u2surp9675.131ENSCAFG00020010497U2SURP9671.685Canis_lupus_dingo
ENSSFOG00015010470u2surp9675.131ENSCHIG00000023892U2SURP8676.104Capra_hircus
ENSSFOG00015010470u2surp9675.131ENSTSYG00000008889U2SURP8976.524Carlito_syrichta
ENSSFOG00015010470u2surp8174.404ENSCAPG00000016009U2SURP8476.243Cavia_aperea
ENSSFOG00015010470u2surp8775.858ENSCPOG00000011656U2SURP9177.600Cavia_porcellus
ENSSFOG00015010470u2surp9669.338ENSCCAG00000032530U2SURP8476.608Cebus_capucinus
ENSSFOG00015010470u2surp9675.235ENSCATG00000039024U2SURP9076.637Cercocebus_atys
ENSSFOG00015010470u2surp9774.213ENSCLAG00000001331-9275.658Chinchilla_lanigera
ENSSFOG00015010470u2surp9753.355ENSCLAG00000011055-8661.941Chinchilla_lanigera
ENSSFOG00015010470u2surp9675.209ENSCSAG00000011321U2SURP8576.784Chlorocebus_sabaeus
ENSSFOG00015010470u2surp6679.587ENSCHOG00000001300U2SURP6979.845Choloepus_hoffmanni
ENSSFOG00015010470u2surp9774.277ENSCPBG00000008969U2SURP9675.391Chrysemys_picta_bellii
ENSSFOG00015010470u2surp8253.846ENSCING00000018030-9153.606Ciona_intestinalis
ENSSFOG00015010470u2surp8751.471ENSCSAVG00000009039-9952.075Ciona_savignyi
ENSSFOG00015010470u2surp9675.131ENSCANG00000032307U2SURP9076.958Colobus_angolensis_palliatus
ENSSFOG00015010470u2surp9675.418ENSCGRG00001019402U2surp9275.768Cricetulus_griseus_chok1gshd
ENSSFOG00015010470u2surp9769.570ENSCGRG00000014315U2surp9966.282Cricetulus_griseus_crigri
ENSSFOG00015010470u2surp9451.374ENSCSEG00000020119zgc:1630989652.018Cynoglossus_semilaevis
ENSSFOG00015010470u2surp9572.623ENSCSEG00000015150u2surp9677.086Cynoglossus_semilaevis
ENSSFOG00015010470u2surp9276.400ENSCVAG00000002961u2surp9180.926Cyprinodon_variegatus
ENSSFOG00015010470u2surp9453.887ENSDARG00000078911zgc:1630989858.590Danio_rerio
ENSSFOG00015010470u2surp9479.893ENSDARG00000061490u2surp9989.455Danio_rerio
ENSSFOG00015010470u2surp9674.870ENSDNOG00000006427U2SURP8576.411Dasypus_novemcinctus
ENSSFOG00015010470u2surp8345.600FBgn0034572CG93469444.362Drosophila_melanogaster
ENSSFOG00015010470u2surp7382.000ENSETEG00000000149U2SURP7572.934Echinops_telfairi
ENSSFOG00015010470u2surp6256.863ENSEBUG00000003543u2surp8256.828Eptatretus_burgeri
ENSSFOG00015010470u2surp9675.131ENSEASG00005000213U2SURP9073.386Equus_asinus_asinus
ENSSFOG00015010470u2surp9675.235ENSECAG00000022460U2SURP9275.583Equus_caballus
ENSSFOG00015010470u2surp8472.601ENSEEUG00000013553U2SURP7072.414Erinaceus_europaeus
ENSSFOG00015010470u2surp9451.940ENSELUG00000017966zgc:1630988758.161Esox_lucius
ENSSFOG00015010470u2surp9775.200ENSELUG00000002150u2surp9277.180Esox_lucius
ENSSFOG00015010470u2surp9675.314ENSFCAG00000012186U2SURP8576.897Felis_catus
ENSSFOG00015010470u2surp9772.571ENSFALG00000007070U2SURP9175.245Ficedula_albicollis
ENSSFOG00015010470u2surp9774.213ENSFDAG00000013365U2SURP9275.658Fukomys_damarensis
ENSSFOG00015010470u2surp8751.591ENSFHEG00000014263zgc:1630989852.296Fundulus_heteroclitus
ENSSFOG00015010470u2surp8379.804ENSFHEG00000016966u2surp9179.007Fundulus_heteroclitus
ENSSFOG00015010470u2surp7153.049ENSGMOG00000000935zgc:1630989454.489Gadus_morhua
ENSSFOG00015010470u2surp9770.642ENSGMOG00000002641u2surp9072.558Gadus_morhua
ENSSFOG00015010470u2surp9576.341ENSGALG00000002612U2SURP8377.324Gallus_gallus
ENSSFOG00015010470u2surp9374.732ENSGAFG00000004001u2surp9677.069Gambusia_affinis
ENSSFOG00015010470u2surp9447.412ENSGACG00000020709zgc:1630988650.668Gasterosteus_aculeatus
ENSSFOG00015010470u2surp9574.108ENSGACG00000003763u2surp9174.593Gasterosteus_aculeatus
ENSSFOG00015010470u2surp9474.894ENSGAGG00000010747U2SURP9176.755Gopherus_agassizii
ENSSFOG00015010470u2surp9675.131ENSGGOG00000005563U2SURP9173.643Gorilla_gorilla
ENSSFOG00015010470u2surp8754.430ENSHBUG00000022716zgc:1630989955.282Haplochromis_burtoni
ENSSFOG00015010470u2surp8585.381ENSHBUG00000015530u2surp9986.253Haplochromis_burtoni
ENSSFOG00015010470u2surp9557.579ENSHGLG00000018851-8257.710Heterocephalus_glaber_female
ENSSFOG00015010470u2surp9774.213ENSHGLG00000017227-9275.658Heterocephalus_glaber_female
ENSSFOG00015010470u2surp9774.213ENSHGLG00100005796-9275.658Heterocephalus_glaber_male
ENSSFOG00015010470u2surp9557.053ENSHGLG00100001176-8257.143Heterocephalus_glaber_male
ENSSFOG00015010470u2surp9557.761ENSHGLG00100001134-8157.907Heterocephalus_glaber_male
ENSSFOG00015010470u2surp9277.365ENSHCOG00000011508u2surp9277.426Hippocampus_comes
ENSSFOG00015010470u2surp8950.924ENSIPUG00000019652zgc:1630989756.052Ictalurus_punctatus
ENSSFOG00015010470u2surp9480.065ENSIPUG00000007822u2surp9281.540Ictalurus_punctatus
ENSSFOG00015010470u2surp9675.209ENSSTOG00000015997U2SURP8576.784Ictidomys_tridecemlineatus
ENSSFOG00015010470u2surp9774.112ENSJJAG00000021595U2surp9275.548Jaculus_jaculus
ENSSFOG00015010470u2surp9451.296ENSKMAG00000009727zgc:1630989253.181Kryptolebias_marmoratus
ENSSFOG00015010470u2surp9578.220ENSKMAG00000012083u2surp9678.436Kryptolebias_marmoratus
ENSSFOG00015010470u2surp8350.665ENSLBEG00000002498zgc:1630989157.627Labrus_bergylta
ENSSFOG00015010470u2surp9074.862ENSLBEG00000026284u2surp9873.498Labrus_bergylta
ENSSFOG00015010470u2surp8860.044ENSLACG00000008434zgc:1630989260.112Latimeria_chalumnae
ENSSFOG00015010470u2surp9474.571ENSLACG00000012318U2SURP9277.199Latimeria_chalumnae
ENSSFOG00015010470u2surp9280.390ENSLOCG00000007828u2surp9280.872Lepisosteus_oculatus
ENSSFOG00015010470u2surp8653.434ENSLOCG00000013596zgc:1630988558.506Lepisosteus_oculatus
ENSSFOG00015010470u2surp9674.922ENSLAFG00000002566U2SURP8576.471Loxodonta_africana
ENSSFOG00015010470u2surp9675.131ENSMFAG00000031084U2SURP9176.637Macaca_fascicularis
ENSSFOG00015010470u2surp9675.131ENSMMUG00000002775U2SURP9275.470Macaca_mulatta
ENSSFOG00015010470u2surp9675.131ENSMNEG00000034553U2SURP9176.637Macaca_nemestrina
ENSSFOG00015010470u2surp9675.131ENSMLEG00000021031U2SURP9176.637Mandrillus_leucophaeus
ENSSFOG00015010470u2surp9252.552ENSMAMG00000016977zgc:1630989853.204Mastacembelus_armatus
ENSSFOG00015010470u2surp9370.242ENSMAMG00000003004u2surp9177.790Mastacembelus_armatus
ENSSFOG00015010470u2surp8381.655ENSMZEG00005021991u2surp9179.510Maylandia_zebra
ENSSFOG00015010470u2surp9151.724ENSMZEG00005016805zgc:1630989153.806Maylandia_zebra
ENSSFOG00015010470u2surp9575.656ENSMGAG00000006549U2SURP9177.438Meleagris_gallopavo
ENSSFOG00015010470u2surp9675.314ENSMICG00000049294U2SURP8576.697Microcebus_murinus
ENSSFOG00015010470u2surp9774.213ENSMOCG00000000631U2surp9275.658Microtus_ochrogaster
ENSSFOG00015010470u2surp9146.818ENSMMOG00000016677zgc:1630988650.000Mola_mola
ENSSFOG00015010470u2surp9273.069ENSMMOG00000004474u2surp9276.575Mola_mola
ENSSFOG00015010470u2surp9573.097ENSMODG00000021242-8374.324Monodelphis_domestica
ENSSFOG00015010470u2surp9769.430ENSMODG00000010847-9269.420Monodelphis_domestica
ENSSFOG00015010470u2surp9277.706ENSMALG00000007458u2surp9577.902Monopterus_albus
ENSSFOG00015010470u2surp9252.552ENSMALG00000015881zgc:1630989954.211Monopterus_albus
ENSSFOG00015010470u2surp9567.072MGP_CAROLIEiJ_G0032530-8076.901Mus_caroli
ENSSFOG00015010470u2surp9675.418ENSMUSG00000032407U2surp9275.768Mus_musculus
ENSSFOG00015010470u2surp9675.523MGP_PahariEiJ_G0015398U2surp9275.768Mus_pahari
ENSSFOG00015010470u2surp9675.418MGP_SPRETEiJ_G0033672U2surp9275.768Mus_spretus
ENSSFOG00015010470u2surp9675.131ENSMPUG00000011855U2SURP8576.697Mustela_putorius_furo
ENSSFOG00015010470u2surp9674.792ENSMLUG00000002920-8676.325Myotis_lucifugus
ENSSFOG00015010470u2surp9772.671ENSMLUG00000014633-8574.434Myotis_lucifugus
ENSSFOG00015010470u2surp9774.112ENSNGAG00000013707U2surp9275.548Nannospalax_galili
ENSSFOG00015010470u2surp9371.227ENSNBRG00000017162u2surp9781.513Neolamprologus_brichardi
ENSSFOG00015010470u2surp8653.855ENSNBRG00000021199zgc:1630989854.460Neolamprologus_brichardi
ENSSFOG00015010470u2surp9675.235ENSNLEG00000004915U2SURP9076.524Nomascus_leucogenys
ENSSFOG00015010470u2surp7681.579ENSMEUG00000000127U2SURP7481.579Notamacropus_eugenii
ENSSFOG00015010470u2surp8465.229ENSOPRG00000011328U2SURP8372.340Ochotona_princeps
ENSSFOG00015010470u2surp9774.213ENSODEG00000008767U2SURP9275.658Octodon_degus
ENSSFOG00015010470u2surp8380.806ENSONIG00000005909u2surp9179.231Oreochromis_niloticus
ENSSFOG00015010470u2surp9151.235ENSONIG00000005263zgc:1630988555.720Oreochromis_niloticus
ENSSFOG00015010470u2surp9671.077ENSOANG00000003644U2SURP8077.388Ornithorhynchus_anatinus
ENSSFOG00015010470u2surp9675.131ENSOCUG00000012121U2SURP8576.697Oryctolagus_cuniculus
ENSSFOG00015010470u2surp8453.846ENSORLG00000007141zgc:1630989851.817Oryzias_latipes
ENSSFOG00015010470u2surp9577.872ENSORLG00000010235u2surp9180.202Oryzias_latipes
ENSSFOG00015010470u2surp8381.227ENSORLG00020011726u2surp9680.935Oryzias_latipes_hni
ENSSFOG00015010470u2surp8453.964ENSORLG00020005525zgc:1630989853.524Oryzias_latipes_hni
ENSSFOG00015010470u2surp9577.872ENSORLG00015011465u2surp9180.202Oryzias_latipes_hsok
ENSSFOG00015010470u2surp8453.964ENSORLG00015010776zgc:1630989452.273Oryzias_latipes_hsok
ENSSFOG00015010470u2surp8652.934ENSOMEG00000002172zgc:1630989452.105Oryzias_melastigma
ENSSFOG00015010470u2surp8180.000ENSOMEG00000004962u2surp9884.034Oryzias_melastigma
ENSSFOG00015010470u2surp9675.131ENSOGAG00000004335U2SURP8576.697Otolemur_garnettii
ENSSFOG00015010470u2surp9674.271ENSOARG00000005871U2SURP8576.437Ovis_aries
ENSSFOG00015010470u2surp9675.131ENSPPRG00000022258U2SURP8576.697Panthera_pardus
ENSSFOG00015010470u2surp9674.817ENSPTIG00000001167U2SURP8576.357Panthera_tigris_altaica
ENSSFOG00015010470u2surp9675.235ENSPTRG00000015489U2SURP8576.810Pan_troglodytes
ENSSFOG00015010470u2surp9675.235ENSPANG00000000710U2SURP9076.637Papio_anubis
ENSSFOG00015010470u2surp9255.000ENSPKIG00000017920zgc:1630988659.085Paramormyrops_kingsleyae
ENSSFOG00015010470u2surp9486.528ENSPKIG00000021859u2surp9189.208Paramormyrops_kingsleyae
ENSSFOG00015010470u2surp9474.576ENSPSIG00000016578U2SURP9176.518Pelodiscus_sinensis
ENSSFOG00015010470u2surp7852.463ENSPMGG00000008623zgc:1630989868.323Periophthalmus_magnuspinnatus
ENSSFOG00015010470u2surp9774.213ENSPEMG00000020825U2surp9275.548Peromyscus_maniculatus_bairdii
ENSSFOG00015010470u2surp9572.461ENSPCIG00000004246U2SURP9372.820Phascolarctos_cinereus
ENSSFOG00015010470u2surp9276.807ENSPFOG00000014489u2surp9178.731Poecilia_formosa
ENSSFOG00015010470u2surp9149.036ENSPFOG00000011956zgc:1630988552.862Poecilia_formosa
ENSSFOG00015010470u2surp9775.080ENSPLAG00000006816u2surp9179.910Poecilia_latipinna
ENSSFOG00015010470u2surp9175.904ENSPMEG00000014599u2surp9575.419Poecilia_mexicana
ENSSFOG00015010470u2surp8381.608ENSPREG00000009325u2surp9482.073Poecilia_reticulata
ENSSFOG00015010470u2surp9674.869ENSPPYG00000014178U2SURP8576.557Pongo_abelii
ENSSFOG00015010470u2surp9669.697ENSPCAG00000015251U2SURP8670.928Procavia_capensis
ENSSFOG00015010470u2surp9671.853ENSPCOG00000019599U2SURP8872.958Propithecus_coquereli
ENSSFOG00015010470u2surp9670.742ENSPVAG00000016077U2SURP8571.946Pteropus_vampyrus
ENSSFOG00015010470u2surp8972.664ENSPNYG00000006246u2surp9770.162Pundamilia_nyererei
ENSSFOG00015010470u2surp9252.511ENSPNAG00000023885zgc:1630989555.205Pygocentrus_nattereri
ENSSFOG00015010470u2surp8382.503ENSPNAG00000001722u2surp9782.603Pygocentrus_nattereri
ENSSFOG00015010470u2surp9774.315ENSRNOG00000008607U2surp9275.768Rattus_norvegicus
ENSSFOG00015010470u2surp9673.651ENSRBIG00000041099U2SURP8575.226Rhinopithecus_bieti
ENSSFOG00015010470u2surp9675.131ENSRROG00000043548U2SURP9076.958Rhinopithecus_roxellana
ENSSFOG00015010470u2surp9675.131ENSSBOG00000027984U2SURP8576.697Saimiri_boliviensis_boliviensis
ENSSFOG00015010470u2surp9575.288ENSSHAG00000014407U2SURP8576.810Sarcophilus_harrisii
ENSSFOG00015010470u2surp9152.081ENSSMAG00000013442zgc:1630989752.797Scophthalmus_maximus
ENSSFOG00015010470u2surp8382.540ENSSMAG00000012475u2surp9181.102Scophthalmus_maximus
ENSSFOG00015010470u2surp9374.682ENSSDUG00000006136u2surp9179.399Seriola_dumerili
ENSSFOG00015010470u2surp9153.725ENSSDUG00000009881zgc:1630989753.881Seriola_dumerili
ENSSFOG00015010470u2surp9153.414ENSSLDG00000020364zgc:1630989559.167Seriola_lalandi_dorsalis
ENSSFOG00015010470u2surp8383.313ENSSLDG00000022385u2surp9181.849Seriola_lalandi_dorsalis
ENSSFOG00015010470u2surp8777.120ENSSARG00000013779U2SURP7778.571Sorex_araneus
ENSSFOG00015010470u2surp9474.630ENSSPUG00000013871U2SURP9176.457Sphenodon_punctatus
ENSSFOG00015010470u2surp9379.741ENSSPAG00000020432u2surp9581.849Stegastes_partitus
ENSSFOG00015010470u2surp9675.235ENSSSCG00000011684U2SURP8776.810Sus_scrofa
ENSSFOG00015010470u2surp9575.656ENSTGUG00000008687U2SURP9177.664Taeniopygia_guttata
ENSSFOG00015010470u2surp9373.134ENSTRUG00000017810u2surp9574.668Takifugu_rubripes
ENSSFOG00015010470u2surp9575.701ENSTNIG00000012767u2surp9176.351Tetraodon_nigroviridis
ENSSFOG00015010470u2surp9668.691ENSTBEG00000016313U2SURP8568.707Tupaia_belangeri
ENSSFOG00015010470u2surp9674.895ENSTTRG00000017170U2SURP8576.444Tursiops_truncatus
ENSSFOG00015010470u2surp9675.131ENSUAMG00000028259U2SURP9373.499Ursus_americanus
ENSSFOG00015010470u2surp9674.843ENSVPAG00000004697U2SURP8576.625Vicugna_pacos
ENSSFOG00015010470u2surp9675.235ENSVVUG00000021495U2SURP9073.499Vulpes_vulpes
ENSSFOG00015010470u2surp9773.787ENSXETG00000022133u2surp9275.724Xenopus_tropicalis
ENSSFOG00015010470u2surp6452.657ENSXCOG00000007025zgc:1630988860.000Xiphophorus_couchianus
ENSSFOG00015010470u2surp8479.527ENSXCOG00000011427u2surp9280.287Xiphophorus_couchianus
ENSSFOG00015010470u2surp8378.375ENSXMAG00000002608u2surp9575.057Xiphophorus_maculatus

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