EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015010518 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-263k4.2
Alias: -
Full Name: PR/SET domain 16
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 169481 bases
Position: chrKV410837.1:960706-1130186
Accession: 108924879
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015016383	zf-C2H2	PF00096.26	2.4e-49	1	10
ENSSFOP00015016383	zf-C2H2	PF00096.26	2.4e-49	2	10
ENSSFOP00015016383	zf-C2H2	PF00096.26	2.4e-49	3	10
ENSSFOP00015016383	zf-C2H2	PF00096.26	2.4e-49	4	10
ENSSFOP00015016383	zf-C2H2	PF00096.26	2.4e-49	5	10
ENSSFOP00015016383	zf-C2H2	PF00096.26	2.4e-49	6	10
ENSSFOP00015016383	zf-C2H2	PF00096.26	2.4e-49	7	10
ENSSFOP00015016383	zf-C2H2	PF00096.26	2.4e-49	8	10
ENSSFOP00015016383	zf-C2H2	PF00096.26	2.4e-49	9	10
ENSSFOP00015016383	zf-C2H2	PF00096.26	2.4e-49	10	10
ENSSFOP00015016383	zf-met	PF12874.7	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015016571	-	3225	XM_018736511	ENSSFOP00015016383	1074 (aa)	XP_018592027	-

Gene Model

Click here to download ENSSFOG00015010518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015010518's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015010518	si:ch211-263k4.2	100	75.408	ENSAMXG00000014024	si:ch211-263k4.2	98	76.506	Astyanax_mexicanus
ENSSFOG00015010518	si:ch211-263k4.2	77	72.222	ENSDARG00000078324	si:ch211-263k4.2	100	73.611	Danio_rerio
ENSSFOG00015010518	si:ch211-263k4.2	100	72.217	ENSIPUG00000020607	prdm16	98	72.649	Ictalurus_punctatus
ENSSFOG00015010518	si:ch211-263k4.2	100	73.036	ENSLOCG00000005336	si:ch211-263k4.2	91	75.547	Lepisosteus_oculatus
ENSSFOG00015010518	si:ch211-263k4.2	100	78.535	ENSPKIG00000013811	si:ch211-263k4.2	99	79.131	Paramormyrops_kingsleyae
ENSSFOG00015010518	si:ch211-263k4.2	100	73.906	ENSPNAG00000027070	si:ch211-263k4.2	99	75.105	Pygocentrus_nattereri