EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015010693 (Gene tree)
Gene ID: 108923009
Gene Symbol: snapc2
Alias: -
Full Name: small nuclear RNA activating complex polypeptide 2
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 7960 bases
Position: chrKV410820.1:8232004-8239963
Accession: 108923009
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015016575	SnAPC_2_like	PF11035.8	1e-87	1	2
ENSSFOP00015016575	SnAPC_2_like	PF11035.8	1e-87	2	2
ENSSFOP00015016564	SnAPC_2_like	PF11035.8	4.7e-70	1	2
ENSSFOP00015016564	SnAPC_2_like	PF11035.8	4.7e-70	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015016752	-	6279	XM_018733452	ENSSFOP00015016564	553 (aa)	XP_018588968	A0A1W4YBD3
ENSSFOT00015016763	-	5813	XM_018733454	ENSSFOP00015016575	547 (aa)	XP_018588970	A0A1W4YKK3

Gene Model

Click here to download ENSSFOG00015010693's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015010693's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015010693	snapc2	64	31.095	ENSAOCG00000013265	-	92	31.421	Amphiprion_ocellaris
ENSSFOG00015010693	snapc2	50	57.143	ENSATEG00000003573	-	53	57.143	Anabas_testudineus
ENSSFOG00015010693	snapc2	65	31.956	ENSANAG00000029939	SNAPC2	81	40.789	Aotus_nancymaae
ENSSFOG00015010693	snapc2	74	36.562	ENSAMXG00000038205	snapc2	88	35.835	Astyanax_mexicanus
ENSSFOG00015010693	snapc2	67	33.780	ENSCPOG00000034229	SNAPC2	83	32.021	Cavia_porcellus
ENSSFOG00015010693	snapc2	58	33.025	ENSCATG00000037131	SNAPC2	73	45.455	Cercocebus_atys
ENSSFOG00015010693	snapc2	60	33.434	ENSCANG00000040525	SNAPC2	66	50.000	Colobus_angolensis_palliatus
ENSSFOG00015010693	snapc2	65	33.058	ENSEASG00005003809	SNAPC2	79	32.692	Equus_asinus_asinus
ENSSFOG00015010693	snapc2	52	31.058	ENSECAG00000011011	SNAPC2	62	52.239	Equus_caballus
ENSSFOG00015010693	snapc2	97	33.615	ENSELUG00000010380	-	69	70.270	Esox_lucius
ENSSFOG00015010693	snapc2	59	40.000	ENSGAGG00000015845	SNAPC2	87	37.059	Gopherus_agassizii
ENSSFOG00015010693	snapc2	65	31.319	ENSHGLG00000011707	SNAPC2	74	59.524	Heterocephalus_glaber_female
ENSSFOG00015010693	snapc2	65	30.541	ENSHGLG00100003422	SNAPC2	82	30.189	Heterocephalus_glaber_male
ENSSFOG00015010693	snapc2	96	35.443	ENSIPUG00000004844	Snapc2	99	35.357	Ictalurus_punctatus
ENSSFOG00015010693	snapc2	71	70.968	ENSLOCG00000014065	snapc2	71	70.968	Lepisosteus_oculatus
ENSSFOG00015010693	snapc2	65	34.349	ENSMICG00000035695	SNAPC2	63	31.849	Microcebus_murinus
ENSSFOG00015010693	snapc2	67	32.540	ENSORLG00000010375	-	68	32.888	Oryzias_latipes
ENSSFOG00015010693	snapc2	67	34.794	ENSORLG00020015071	-	82	32.718	Oryzias_latipes_hni
ENSSFOG00015010693	snapc2	67	34.439	ENSOMEG00000003040	snapc2	80	31.443	Oryzias_melastigma
ENSSFOG00015010693	snapc2	53	30.375	ENSOARG00000003045	SNAPC2	62	51.852	Ovis_aries
ENSSFOG00015010693	snapc2	78	56.024	ENSPKIG00000000084	snapc2	94	56.024	Paramormyrops_kingsleyae
ENSSFOG00015010693	snapc2	67	32.494	ENSPFOG00000012045	-	70	43.000	Poecilia_formosa
ENSSFOG00015010693	snapc2	67	32.242	ENSPLAG00000018873	-	67	45.349	Poecilia_latipinna
ENSSFOG00015010693	snapc2	67	31.500	ENSPMEG00000002270	-	67	45.349	Poecilia_mexicana
ENSSFOG00015010693	snapc2	65	32.597	ENSRBIG00000044314	SNAPC2	70	45.361	Rhinopithecus_bieti
ENSSFOG00015010693	snapc2	65	32.597	ENSRROG00000043480	SNAPC2	70	45.361	Rhinopithecus_roxellana
ENSSFOG00015010693	snapc2	69	41.447	ENSSMAG00000009095	-	73	40.132	Scophthalmus_maximus
ENSSFOG00015010693	snapc2	50	31.900	ENSTRUG00000005122	-	61	50.704	Takifugu_rubripes