EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015010784 (Gene tree)
Gene ID: 108928423
Gene Symbol: tarbp2
Alias: fj51e12|wu:fj51e12|zgc:63778
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 5091 bases
Position: chrKV410887.1:304143-309233
Accession: 108928423
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015016724	dsrm	PF00035.26	6.8e-35	1	2
ENSSFOP00015016724	dsrm	PF00035.26	6.8e-35	2	2
ENSSFOP00015016731	dsrm	PF00035.26	6.8e-35	1	2
ENSSFOP00015016731	dsrm	PF00035.26	6.8e-35	2	2
ENSSFOP00015016724	DND1_DSRM	PF14709.7	1.4e-13	1	1
ENSSFOP00015016731	DND1_DSRM	PF14709.7	1.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015016913	-	1833	XM_018742341	ENSSFOP00015016724	357 (aa)	XP_018597857	A0A1W4Z231
ENSSFOT00015016920	-	1627	-	ENSSFOP00015016731	357 (aa)	-	A0A1W4Z231

Gene Model

Click here to download ENSSFOG00015010784's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015010784's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015010784	tarbp2	96	45.161	ENSSFOG00015002157	prkra	94	45.161

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015010784	tarbp2	96	67.139	ENSG00000139546	TARBP2	88	92.208	Homo_sapiens
ENSSFOG00015010784	tarbp2	100	79.888	ENSAPOG00000019892	tarbp2	100	80.780	Acanthochromis_polyacanthus
ENSSFOG00015010784	tarbp2	96	67.135	ENSAMEG00000012601	TARBP2	100	66.393	Ailuropoda_melanoleuca
ENSSFOG00015010784	tarbp2	100	79.330	ENSACIG00000016780	tarbp2	100	79.666	Amphilophus_citrinellus
ENSSFOG00015010784	tarbp2	100	79.888	ENSAOCG00000005201	tarbp2	100	80.780	Amphiprion_ocellaris
ENSSFOG00015010784	tarbp2	100	79.888	ENSAPEG00000008376	tarbp2	100	80.780	Amphiprion_percula
ENSSFOG00015010784	tarbp2	100	80.168	ENSATEG00000025012	tarbp2	100	80.332	Anabas_testudineus
ENSSFOG00015010784	tarbp2	98	69.663	ENSACAG00000001100	TARBP2	97	69.972	Anolis_carolinensis
ENSSFOG00015010784	tarbp2	100	64.305	ENSANAG00000034453	TARBP2	94	75.676	Aotus_nancymaae
ENSSFOG00015010784	tarbp2	97	78.161	ENSACLG00000018569	tarbp2	97	78.510	Astatotilapia_calliptera
ENSSFOG00015010784	tarbp2	100	80.392	ENSAMXG00000016665	tarbp2	100	81.513	Astyanax_mexicanus
ENSSFOG00015010784	tarbp2	100	64.324	ENSBTAG00000000435	TARBP2	100	66.120	Bos_taurus
ENSSFOG00015010784	tarbp2	100	65.123	ENSCJAG00000018668	TARBP2	100	65.847	Callithrix_jacchus
ENSSFOG00015010784	tarbp2	100	66.667	ENSCAFG00000006874	TARBP2	100	66.111	Canis_familiaris
ENSSFOG00015010784	tarbp2	100	66.393	ENSCAFG00020020735	TARBP2	100	68.406	Canis_lupus_dingo
ENSSFOG00015010784	tarbp2	100	64.960	ENSCHIG00000026017	TARBP2	100	65.405	Capra_hircus
ENSSFOG00015010784	tarbp2	100	66.213	ENSTSYG00000035683	TARBP2	94	75.676	Carlito_syrichta
ENSSFOG00015010784	tarbp2	59	72.558	ENSCAPG00000008981	TARBP2	96	72.093	Cavia_aperea
ENSSFOG00015010784	tarbp2	100	65.499	ENSCPOG00000001009	TARBP2	100	66.120	Cavia_porcellus
ENSSFOG00015010784	tarbp2	97	66.667	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSSFOG00015010784	tarbp2	100	65.123	ENSCATG00000026344	TARBP2	94	75.676	Cercocebus_atys
ENSSFOG00015010784	tarbp2	100	65.499	ENSCLAG00000009175	TARBP2	100	65.847	Chinchilla_lanigera
ENSSFOG00015010784	tarbp2	100	65.123	ENSCSAG00000005479	TARBP2	100	65.847	Chlorocebus_sabaeus
ENSSFOG00015010784	tarbp2	100	67.769	ENSCPBG00000000654	TARBP2	100	69.617	Chrysemys_picta_bellii
ENSSFOG00015010784	tarbp2	100	64.578	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSSFOG00015010784	tarbp2	96	68.182	ENSCGRG00001011856	TARBP2	100	66.120	Cricetulus_griseus_chok1gshd
ENSSFOG00015010784	tarbp2	96	68.182	ENSCGRG00000009088	TARBP2	100	68.033	Cricetulus_griseus_crigri
ENSSFOG00015010784	tarbp2	100	79.050	ENSCSEG00000010631	tarbp2	100	79.666	Cynoglossus_semilaevis
ENSSFOG00015010784	tarbp2	100	80.447	ENSCVAG00000009832	tarbp2	100	79.330	Cyprinodon_variegatus
ENSSFOG00015010784	tarbp2	100	79.722	ENSDARG00000070471	tarbp2	100	80.278	Danio_rerio
ENSSFOG00015010784	tarbp2	96	68.750	ENSDNOG00000002144	TARBP2	100	66.667	Dasypus_novemcinctus
ENSSFOG00015010784	tarbp2	63	71.179	ENSDORG00000001390	Tarbp2	94	71.179	Dipodomys_ordii
ENSSFOG00015010784	tarbp2	83	80.612	ENSETEG00000002458	TARBP2	82	80.612	Echinops_telfairi
ENSSFOG00015010784	tarbp2	95	58.358	ENSEBUG00000002377	tarbp2	98	58.651	Eptatretus_burgeri
ENSSFOG00015010784	tarbp2	96	66.573	ENSEASG00005010030	TARBP2	100	66.393	Equus_asinus_asinus
ENSSFOG00015010784	tarbp2	100	66.033	ENSECAG00000011695	TARBP2	94	75.676	Equus_caballus
ENSSFOG00015010784	tarbp2	85	64.103	ENSEEUG00000001128	-	99	64.103	Erinaceus_europaeus
ENSSFOG00015010784	tarbp2	100	79.944	ENSELUG00000010642	tarbp2	100	80.387	Esox_lucius
ENSSFOG00015010784	tarbp2	100	65.054	ENSFCAG00000007757	TARBP2	100	66.667	Felis_catus
ENSSFOG00015010784	tarbp2	100	65.395	ENSFDAG00000011932	TARBP2	100	67.623	Fukomys_damarensis
ENSSFOG00015010784	tarbp2	94	80.415	ENSFHEG00000016118	tarbp2	100	79.822	Fundulus_heteroclitus
ENSSFOG00015010784	tarbp2	100	78.056	ENSGMOG00000001290	tarbp2	100	77.839	Gadus_morhua
ENSSFOG00015010784	tarbp2	61	72.018	ENSGALG00000038939	-	83	72.018	Gallus_gallus
ENSSFOG00015010784	tarbp2	100	79.888	ENSGAFG00000013341	tarbp2	100	78.670	Gambusia_affinis
ENSSFOG00015010784	tarbp2	100	79.167	ENSGACG00000006645	tarbp2	100	79.778	Gasterosteus_aculeatus
ENSSFOG00015010784	tarbp2	100	68.044	ENSGAGG00000021169	TARBP2	100	68.056	Gopherus_agassizii
ENSSFOG00015010784	tarbp2	97	66.667	ENSGGOG00000012637	TARBP2	81	85.938	Gorilla_gorilla
ENSSFOG00015010784	tarbp2	100	79.050	ENSHBUG00000018639	tarbp2	100	79.387	Haplochromis_burtoni
ENSSFOG00015010784	tarbp2	100	65.395	ENSHGLG00000001284	TARBP2	100	66.120	Heterocephalus_glaber_female
ENSSFOG00015010784	tarbp2	100	65.395	ENSHGLG00100011274	TARBP2	100	66.120	Heterocephalus_glaber_male
ENSSFOG00015010784	tarbp2	100	76.536	ENSHCOG00000001027	tarbp2	100	76.045	Hippocampus_comes
ENSSFOG00015010784	tarbp2	100	79.444	ENSIPUG00000023701	tarbp2	100	79.224	Ictalurus_punctatus
ENSSFOG00015010784	tarbp2	97	66.667	ENSSTOG00000003678	TARBP2	100	68.443	Ictidomys_tridecemlineatus
ENSSFOG00015010784	tarbp2	100	81.006	ENSKMAG00000012142	tarbp2	100	80.110	Kryptolebias_marmoratus
ENSSFOG00015010784	tarbp2	100	79.330	ENSLBEG00000015027	tarbp2	100	78.533	Labrus_bergylta
ENSSFOG00015010784	tarbp2	95	62.941	ENSLACG00000007087	TARBP2	95	63.081	Latimeria_chalumnae
ENSSFOG00015010784	tarbp2	100	79.552	ENSLOCG00000005711	tarbp2	100	75.806	Lepisosteus_oculatus
ENSSFOG00015010784	tarbp2	73	63.235	ENSLAFG00000002620	TARBP2	95	63.060	Loxodonta_africana
ENSSFOG00015010784	tarbp2	100	65.123	ENSMFAG00000013567	TARBP2	94	75.676	Macaca_fascicularis
ENSSFOG00015010784	tarbp2	100	65.395	ENSMMUG00000018492	TARBP2	100	66.120	Macaca_mulatta
ENSSFOG00015010784	tarbp2	100	65.123	ENSMNEG00000036477	TARBP2	94	75.676	Macaca_nemestrina
ENSSFOG00015010784	tarbp2	100	65.123	ENSMLEG00000029583	TARBP2	94	75.676	Mandrillus_leucophaeus
ENSSFOG00015010784	tarbp2	95	80.645	ENSMAMG00000010272	tarbp2	97	82.164	Mastacembelus_armatus
ENSSFOG00015010784	tarbp2	100	79.050	ENSMZEG00005006895	tarbp2	100	79.387	Maylandia_zebra
ENSSFOG00015010784	tarbp2	96	67.898	ENSMAUG00000019805	Tarbp2	100	65.753	Mesocricetus_auratus
ENSSFOG00015010784	tarbp2	94	67.919	ENSMICG00000027441	TARBP2	94	75.676	Microcebus_murinus
ENSSFOG00015010784	tarbp2	96	68.466	ENSMOCG00000003691	Tarbp2	100	66.393	Microtus_ochrogaster
ENSSFOG00015010784	tarbp2	94	79.822	ENSMMOG00000010374	tarbp2	100	78.613	Mola_mola
ENSSFOG00015010784	tarbp2	100	80.168	ENSMALG00000009773	tarbp2	100	80.780	Monopterus_albus
ENSSFOG00015010784	tarbp2	100	66.120	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSSFOG00015010784	tarbp2	100	66.120	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSSFOG00015010784	tarbp2	100	66.120	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSSFOG00015010784	tarbp2	100	66.120	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSSFOG00015010784	tarbp2	96	68.182	ENSMPUG00000005944	TARBP2	100	65.753	Mustela_putorius_furo
ENSSFOG00015010784	tarbp2	100	65.135	ENSMLUG00000010035	TARBP2	100	66.667	Myotis_lucifugus
ENSSFOG00015010784	tarbp2	96	67.139	ENSNLEG00000017690	TARBP2	94	75.676	Nomascus_leucogenys
ENSSFOG00015010784	tarbp2	96	69.186	ENSMEUG00000001916	TARBP2	96	69.186	Notamacropus_eugenii
ENSSFOG00015010784	tarbp2	61	71.946	ENSOPRG00000011397	TARBP2	98	71.946	Ochotona_princeps
ENSSFOG00015010784	tarbp2	62	68.282	ENSODEG00000013413	TARBP2	100	69.469	Octodon_degus
ENSSFOG00015010784	tarbp2	95	78.448	ENSONIG00000005115	tarbp2	96	78.448	Oreochromis_niloticus
ENSSFOG00015010784	tarbp2	96	69.014	ENSOCUG00000005700	TARBP2	96	69.318	Oryctolagus_cuniculus
ENSSFOG00015010784	tarbp2	100	78.492	ENSORLG00000005209	tarbp2	100	77.933	Oryzias_latipes
ENSSFOG00015010784	tarbp2	100	78.492	ENSORLG00020017755	tarbp2	100	77.933	Oryzias_latipes_hni
ENSSFOG00015010784	tarbp2	100	78.492	ENSORLG00015013237	tarbp2	100	77.933	Oryzias_latipes_hsok
ENSSFOG00015010784	tarbp2	100	79.609	ENSOMEG00000018860	tarbp2	100	79.330	Oryzias_melastigma
ENSSFOG00015010784	tarbp2	96	67.422	ENSOGAG00000001744	TARBP2	100	66.120	Otolemur_garnettii
ENSSFOG00015010784	tarbp2	96	68.182	ENSOARG00000016437	TARBP2	100	66.120	Ovis_aries
ENSSFOG00015010784	tarbp2	96	67.139	ENSPPAG00000030429	TARBP2	94	75.676	Pan_paniscus
ENSSFOG00015010784	tarbp2	100	66.667	ENSPPRG00000000189	TARBP2	100	66.667	Panthera_pardus
ENSSFOG00015010784	tarbp2	100	67.590	ENSPTIG00000007859	TARBP2	100	67.313	Panthera_tigris_altaica
ENSSFOG00015010784	tarbp2	96	67.139	ENSPTRG00000005020	TARBP2	94	75.676	Pan_troglodytes
ENSSFOG00015010784	tarbp2	100	65.123	ENSPANG00000010689	TARBP2	94	75.676	Papio_anubis
ENSSFOG00015010784	tarbp2	100	83.473	ENSPKIG00000002455	tarbp2	100	83.287	Paramormyrops_kingsleyae
ENSSFOG00015010784	tarbp2	100	78.771	ENSPMGG00000006497	tarbp2	100	78.771	Periophthalmus_magnuspinnatus
ENSSFOG00015010784	tarbp2	96	67.330	ENSPEMG00000014285	Tarbp2	100	65.205	Peromyscus_maniculatus_bairdii
ENSSFOG00015010784	tarbp2	93	60.241	ENSPMAG00000000105	tarbp2	99	60.241	Petromyzon_marinus
ENSSFOG00015010784	tarbp2	96	69.795	ENSPCIG00000006672	TARBP2	89	69.186	Phascolarctos_cinereus
ENSSFOG00015010784	tarbp2	100	80.726	ENSPFOG00000007586	tarbp2	100	79.501	Poecilia_formosa
ENSSFOG00015010784	tarbp2	100	80.447	ENSPLAG00000017659	tarbp2	100	79.224	Poecilia_latipinna
ENSSFOG00015010784	tarbp2	100	80.726	ENSPMEG00000007775	tarbp2	100	79.501	Poecilia_mexicana
ENSSFOG00015010784	tarbp2	100	80.447	ENSPREG00000007815	tarbp2	100	79.224	Poecilia_reticulata
ENSSFOG00015010784	tarbp2	97	64.957	ENSPPYG00000004583	TARBP2	97	65.429	Pongo_abelii
ENSSFOG00015010784	tarbp2	79	62.626	ENSPCAG00000005352	TARBP2	59	73.953	Procavia_capensis
ENSSFOG00015010784	tarbp2	100	65.668	ENSPCOG00000013102	TARBP2	94	75.676	Propithecus_coquereli
ENSSFOG00015010784	tarbp2	100	66.120	ENSPVAG00000012286	TARBP2	100	65.847	Pteropus_vampyrus
ENSSFOG00015010784	tarbp2	100	79.050	ENSPNYG00000014125	tarbp2	100	79.387	Pundamilia_nyererei
ENSSFOG00015010784	tarbp2	100	81.232	ENSPNAG00000011128	tarbp2	100	81.513	Pygocentrus_nattereri
ENSSFOG00015010784	tarbp2	96	67.330	ENSRNOG00000042355	Tarbp2	100	65.205	Rattus_norvegicus
ENSSFOG00015010784	tarbp2	100	65.123	ENSRBIG00000027150	TARBP2	94	75.676	Rhinopithecus_bieti
ENSSFOG00015010784	tarbp2	100	65.123	ENSRROG00000044783	TARBP2	94	75.676	Rhinopithecus_roxellana
ENSSFOG00015010784	tarbp2	100	64.850	ENSSBOG00000027305	TARBP2	94	75.676	Saimiri_boliviensis_boliviensis
ENSSFOG00015010784	tarbp2	96	69.231	ENSSHAG00000007064	TARBP2	100	69.048	Sarcophilus_harrisii
ENSSFOG00015010784	tarbp2	100	78.571	ENSSMAG00000012769	tarbp2	100	79.178	Scophthalmus_maximus
ENSSFOG00015010784	tarbp2	100	80.447	ENSSDUG00000018818	tarbp2	100	81.337	Seriola_dumerili
ENSSFOG00015010784	tarbp2	100	80.168	ENSSLDG00000001835	tarbp2	100	81.058	Seriola_lalandi_dorsalis
ENSSFOG00015010784	tarbp2	73	68.159	ENSSARG00000001010	TARBP2	73	68.159	Sorex_araneus
ENSSFOG00015010784	tarbp2	65	71.429	ENSSPUG00000005895	TARBP2	100	48.925	Sphenodon_punctatus
ENSSFOG00015010784	tarbp2	100	80.447	ENSSPAG00000022797	tarbp2	100	79.944	Stegastes_partitus
ENSSFOG00015010784	tarbp2	96	66.760	ENSSSCG00000000276	TARBP2	100	68.116	Sus_scrofa
ENSSFOG00015010784	tarbp2	72	57.364	ENSTGUG00000017031	TARBP2	70	80.328	Taeniopygia_guttata
ENSSFOG00015010784	tarbp2	100	81.006	ENSTRUG00000014379	tarbp2	100	80.110	Takifugu_rubripes
ENSSFOG00015010784	tarbp2	100	79.888	ENSTNIG00000007065	tarbp2	100	79.006	Tetraodon_nigroviridis
ENSSFOG00015010784	tarbp2	100	65.395	ENSTTRG00000017177	TARBP2	100	66.120	Tursiops_truncatus
ENSSFOG00015010784	tarbp2	96	67.697	ENSUAMG00000009011	TARBP2	100	67.213	Ursus_americanus
ENSSFOG00015010784	tarbp2	96	67.135	ENSUMAG00000010461	TARBP2	100	66.667	Ursus_maritimus
ENSSFOG00015010784	tarbp2	100	66.393	ENSVVUG00000028150	TARBP2	100	68.406	Vulpes_vulpes
ENSSFOG00015010784	tarbp2	98	68.258	ENSXETG00000012644	tarbp2	99	68.258	Xenopus_tropicalis
ENSSFOG00015010784	tarbp2	100	80.447	ENSXMAG00000017836	tarbp2	100	79.224	Xiphophorus_maculatus