EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015010861 (Gene tree)
Gene ID: 108927155
Gene Symbol: c1d
Alias: zgc:103509
Full Name: C1D nuclear receptor corepressor
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 5094 bases
Position: chrKV410863.1:3669268-3674361
Accession: 108927155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015016883	Sas10_Utp3	PF04000.15	1.8e-17	1	1
ENSSFOP00015016888	Sas10_Utp3	PF04000.15	1.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015017073	-	423	-	ENSSFOP00015016883	140 (aa)	-	-
ENSSFOT00015017078	-	426	XM_018740269	ENSSFOP00015016888	141 (aa)	XP_018595785	A0A1W4Z504

Gene Model

Click here to download ENSSFOG00015010861's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015010861's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015010861	c1d	89	68.800	ENSG00000197223	C1D	88	68.800	Homo_sapiens
ENSSFOG00015010861	c1d	100	65.714	ENSAPOG00000005466	c1d	91	65.714	Acanthochromis_polyacanthus
ENSSFOG00015010861	c1d	89	68.800	ENSAMEG00000004859	C1D	85	68.800	Ailuropoda_melanoleuca
ENSSFOG00015010861	c1d	97	68.382	ENSACIG00000012684	c1d	88	68.382	Amphilophus_citrinellus
ENSSFOG00015010861	c1d	99	65.217	ENSAOCG00000020354	c1d	90	65.217	Amphiprion_ocellaris
ENSSFOG00015010861	c1d	99	63.768	ENSAPEG00000001403	c1d	90	63.768	Amphiprion_percula
ENSSFOG00015010861	c1d	100	65.714	ENSATEG00000012922	c1d	90	65.714	Anabas_testudineus
ENSSFOG00015010861	c1d	87	67.213	ENSAPLG00000009320	C1D	84	67.213	Anas_platyrhynchos
ENSSFOG00015010861	c1d	84	70.940	ENSACAG00000001337	C1D	96	70.940	Anolis_carolinensis
ENSSFOG00015010861	c1d	89	65.600	ENSANAG00000005773	-	88	65.600	Aotus_nancymaae
ENSSFOG00015010861	c1d	89	68.000	ENSANAG00000035972	-	88	68.000	Aotus_nancymaae
ENSSFOG00015010861	c1d	82	72.174	ENSACLG00000026206	c1d	85	66.667	Astatotilapia_calliptera
ENSSFOG00015010861	c1d	96	67.910	ENSAMXG00000043212	c1d	92	67.910	Astyanax_mexicanus
ENSSFOG00015010861	c1d	89	67.742	ENSBTAG00000049002	C1D	88	67.742	Bos_taurus
ENSSFOG00015010861	c1d	79	65.179	ENSCJAG00000044668	-	87	65.179	Callithrix_jacchus
ENSSFOG00015010861	c1d	99	62.937	ENSCJAG00000006589	C1D	93	62.937	Callithrix_jacchus
ENSSFOG00015010861	c1d	89	69.600	ENSCAFG00000030099	C1D	88	69.600	Canis_familiaris
ENSSFOG00015010861	c1d	89	69.600	ENSCAFG00020026997	C1D	88	69.600	Canis_lupus_dingo
ENSSFOG00015010861	c1d	89	67.742	ENSCHIG00000025729	C1D	88	67.742	Capra_hircus
ENSSFOG00015010861	c1d	89	68.800	ENSTSYG00000035739	-	88	68.800	Carlito_syrichta
ENSSFOG00015010861	c1d	79	65.766	ENSTSYG00000026573	-	71	65.766	Carlito_syrichta
ENSSFOG00015010861	c1d	81	62.281	ENSCAPG00000011523	-	94	62.281	Cavia_aperea
ENSSFOG00015010861	c1d	89	69.600	ENSCPOG00000037986	-	88	69.600	Cavia_porcellus
ENSSFOG00015010861	c1d	81	62.281	ENSCPOG00000020112	-	94	62.281	Cavia_porcellus
ENSSFOG00015010861	c1d	89	68.800	ENSCCAG00000030405	-	88	68.800	Cebus_capucinus
ENSSFOG00015010861	c1d	89	68.000	ENSCATG00000043348	-	88	68.000	Cercocebus_atys
ENSSFOG00015010861	c1d	89	68.800	ENSCATG00000045336	C1D	88	68.800	Cercocebus_atys
ENSSFOG00015010861	c1d	89	68.800	ENSCLAG00000011883	C1D	88	68.800	Chinchilla_lanigera
ENSSFOG00015010861	c1d	89	68.800	ENSCSAG00000014811	C1D	88	68.800	Chlorocebus_sabaeus
ENSSFOG00015010861	c1d	89	68.800	ENSCHOG00000006719	C1D	69	68.800	Choloepus_hoffmanni
ENSSFOG00015010861	c1d	99	64.085	ENSCPBG00000014451	C1D	96	64.085	Chrysemys_picta_bellii
ENSSFOG00015010861	c1d	83	52.586	ENSCING00000020906	-	64	51.639	Ciona_intestinalis
ENSSFOG00015010861	c1d	85	48.739	ENSCSAVG00000000150	-	68	48.739	Ciona_savignyi
ENSSFOG00015010861	c1d	89	66.935	ENSCANG00000035564	C1D	88	66.935	Colobus_angolensis_palliatus
ENSSFOG00015010861	c1d	88	62.903	ENSCANG00000036599	-	100	62.903	Colobus_angolensis_palliatus
ENSSFOG00015010861	c1d	89	68.800	ENSCGRG00001023376	C1d	88	68.800	Cricetulus_griseus_chok1gshd
ENSSFOG00015010861	c1d	89	68.800	ENSCGRG00000010245	C1d	88	68.800	Cricetulus_griseus_crigri
ENSSFOG00015010861	c1d	100	66.429	ENSCSEG00000000587	c1d	97	66.667	Cynoglossus_semilaevis
ENSSFOG00015010861	c1d	100	65.714	ENSCVAG00000004603	c1d	90	65.714	Cyprinodon_variegatus
ENSSFOG00015010861	c1d	88	73.171	ENSDARG00000021112	c1d	87	72.093	Danio_rerio
ENSSFOG00015010861	c1d	89	63.200	ENSDNOG00000046068	-	88	63.200	Dasypus_novemcinctus
ENSSFOG00015010861	c1d	99	62.143	ENSDORG00000003300	C1d	99	62.143	Dipodomys_ordii
ENSSFOG00015010861	c1d	56	74.359	ENSETEG00000014857	C1D	82	74.359	Echinops_telfairi
ENSSFOG00015010861	c1d	92	48.837	ENSEBUG00000006874	c1d	81	48.837	Eptatretus_burgeri
ENSSFOG00015010861	c1d	89	68.800	ENSEASG00005007307	C1D	81	68.800	Equus_asinus_asinus
ENSSFOG00015010861	c1d	89	68.800	ENSECAG00000002187	C1D	89	68.800	Equus_caballus
ENSSFOG00015010861	c1d	86	76.667	ENSELUG00000014823	c1d	82	76.667	Esox_lucius
ENSSFOG00015010861	c1d	89	68.800	ENSFCAG00000028933	C1D	88	68.800	Felis_catus
ENSSFOG00015010861	c1d	91	64.341	ENSFALG00000013640	C1D	78	64.341	Ficedula_albicollis
ENSSFOG00015010861	c1d	89	52.800	ENSFDAG00000014175	-	86	52.800	Fukomys_damarensis
ENSSFOG00015010861	c1d	97	64.964	ENSFDAG00000010462	-	91	64.964	Fukomys_damarensis
ENSSFOG00015010861	c1d	99	65.942	ENSFHEG00000010545	c1d	96	65.942	Fundulus_heteroclitus
ENSSFOG00015010861	c1d	86	70.000	ENSGMOG00000013911	-	95	70.000	Gadus_morhua
ENSSFOG00015010861	c1d	99	64.493	ENSGALG00000008765	C1D	96	64.493	Gallus_gallus
ENSSFOG00015010861	c1d	98	64.029	ENSGAFG00000012578	c1d	89	64.029	Gambusia_affinis
ENSSFOG00015010861	c1d	91	72.441	ENSGACG00000011981	c1d	99	72.441	Gasterosteus_aculeatus
ENSSFOG00015010861	c1d	91	65.891	ENSGAGG00000013383	C1D	99	60.959	Gopherus_agassizii
ENSSFOG00015010861	c1d	83	67.241	ENSGGOG00000025808	-	67	67.241	Gorilla_gorilla
ENSSFOG00015010861	c1d	84	66.393	ENSGGOG00000022296	-	87	66.393	Gorilla_gorilla
ENSSFOG00015010861	c1d	89	68.800	ENSGGOG00000025982	-	69	68.800	Gorilla_gorilla
ENSSFOG00015010861	c1d	84	71.795	ENSHBUG00000018531	c1d	78	66.418	Haplochromis_burtoni
ENSSFOG00015010861	c1d	89	59.677	ENSHGLG00000021219	-	88	59.677	Heterocephalus_glaber_female
ENSSFOG00015010861	c1d	89	69.600	ENSHGLG00000012332	-	88	69.600	Heterocephalus_glaber_female
ENSSFOG00015010861	c1d	89	69.600	ENSHGLG00100000221	-	88	69.600	Heterocephalus_glaber_male
ENSSFOG00015010861	c1d	89	60.484	ENSHGLG00100019951	-	88	60.484	Heterocephalus_glaber_male
ENSSFOG00015010861	c1d	87	63.115	ENSHCOG00000014589	c1d	83	63.115	Hippocampus_comes
ENSSFOG00015010861	c1d	87	63.115	ENSHCOG00000014568	C1D	83	63.115	Hippocampus_comes
ENSSFOG00015010861	c1d	87	66.393	ENSIPUG00000018661	c1d	85	66.393	Ictalurus_punctatus
ENSSFOG00015010861	c1d	89	68.800	ENSSTOG00000012346	C1D	88	68.800	Ictidomys_tridecemlineatus
ENSSFOG00015010861	c1d	99	60.432	ENSJJAG00000005044	-	100	60.432	Jaculus_jaculus
ENSSFOG00015010861	c1d	99	61.151	ENSJJAG00000009540	-	100	61.151	Jaculus_jaculus
ENSSFOG00015010861	c1d	84	68.644	ENSJJAG00000023186	-	89	68.644	Jaculus_jaculus
ENSSFOG00015010861	c1d	99	56.115	ENSJJAG00000016086	-	100	56.115	Jaculus_jaculus
ENSSFOG00015010861	c1d	100	67.143	ENSKMAG00000015077	c1d	90	66.187	Kryptolebias_marmoratus
ENSSFOG00015010861	c1d	98	64.493	ENSLBEG00000008351	c1d	89	64.493	Labrus_bergylta
ENSSFOG00015010861	c1d	92	67.692	ENSLACG00000007516	C1D	87	67.692	Latimeria_chalumnae
ENSSFOG00015010861	c1d	100	70.068	ENSLOCG00000016024	c1d	100	70.068	Lepisosteus_oculatus
ENSSFOG00015010861	c1d	99	62.143	ENSLAFG00000002083	C1D	99	62.143	Loxodonta_africana
ENSSFOG00015010861	c1d	89	68.000	ENSMFAG00000034034	-	88	68.000	Macaca_fascicularis
ENSSFOG00015010861	c1d	89	68.800	ENSMFAG00000034261	C1D	88	68.800	Macaca_fascicularis
ENSSFOG00015010861	c1d	89	67.200	ENSMFAG00000028681	-	88	67.200	Macaca_fascicularis
ENSSFOG00015010861	c1d	89	68.800	ENSMMUG00000041557	C1D	89	68.800	Macaca_mulatta
ENSSFOG00015010861	c1d	89	68.000	ENSMMUG00000043184	-	88	68.000	Macaca_mulatta
ENSSFOG00015010861	c1d	89	66.400	ENSMMUG00000017209	-	88	66.400	Macaca_mulatta
ENSSFOG00015010861	c1d	89	68.000	ENSMNEG00000020626	-	88	68.000	Macaca_nemestrina
ENSSFOG00015010861	c1d	89	68.800	ENSMNEG00000040612	C1D	88	68.800	Macaca_nemestrina
ENSSFOG00015010861	c1d	89	68.800	ENSMLEG00000027619	C1D	88	68.800	Mandrillus_leucophaeus
ENSSFOG00015010861	c1d	89	68.000	ENSMLEG00000028412	-	88	68.000	Mandrillus_leucophaeus
ENSSFOG00015010861	c1d	91	69.531	ENSMAMG00000022156	c1d	90	65.000	Mastacembelus_armatus
ENSSFOG00015010861	c1d	84	71.795	ENSMZEG00005027343	c1d	89	66.418	Maylandia_zebra
ENSSFOG00015010861	c1d	99	63.768	ENSMGAG00000004517	C1D	97	63.768	Meleagris_gallopavo
ENSSFOG00015010861	c1d	100	63.830	ENSMAUG00000008974	C1d	99	63.830	Mesocricetus_auratus
ENSSFOG00015010861	c1d	89	70.400	ENSMICG00000032141	C1D	88	70.400	Microcebus_murinus
ENSSFOG00015010861	c1d	89	68.800	ENSMOCG00000010860	C1d	88	68.800	Microtus_ochrogaster
ENSSFOG00015010861	c1d	99	66.667	ENSMMOG00000007332	c1d	89	66.667	Mola_mola
ENSSFOG00015010861	c1d	99	65.493	ENSMODG00000003561	C1D	100	65.493	Monodelphis_domestica
ENSSFOG00015010861	c1d	100	64.000	ENSMALG00000020864	c1d	100	64.000	Monopterus_albus
ENSSFOG00015010861	c1d	89	68.800	MGP_CAROLIEiJ_G0016110	C1d	100	68.908	Mus_caroli
ENSSFOG00015010861	c1d	89	68.800	ENSMUSG00000000581	C1d	100	68.908	Mus_musculus
ENSSFOG00015010861	c1d	89	69.600	MGP_PahariEiJ_G0016781	C1d	100	69.748	Mus_pahari
ENSSFOG00015010861	c1d	89	68.800	MGP_SPRETEiJ_G0016952	C1d	100	68.908	Mus_spretus
ENSSFOG00015010861	c1d	89	69.600	ENSMPUG00000006224	C1D	88	69.600	Mustela_putorius_furo
ENSSFOG00015010861	c1d	99	64.539	ENSMLUG00000010791	-	100	64.539	Myotis_lucifugus
ENSSFOG00015010861	c1d	99	62.411	ENSMLUG00000024947	-	100	62.411	Myotis_lucifugus
ENSSFOG00015010861	c1d	99	64.789	ENSMLUG00000029990	-	100	64.789	Myotis_lucifugus
ENSSFOG00015010861	c1d	89	62.400	ENSNGAG00000016675	-	88	62.400	Nannospalax_galili
ENSSFOG00015010861	c1d	78	66.055	ENSNGAG00000012482	-	87	66.055	Nannospalax_galili
ENSSFOG00015010861	c1d	89	65.600	ENSNGAG00000011872	-	88	65.600	Nannospalax_galili
ENSSFOG00015010861	c1d	88	69.919	ENSNBRG00000010704	c1d	89	67.164	Neolamprologus_brichardi
ENSSFOG00015010861	c1d	89	68.800	ENSNLEG00000032919	-	69	68.800	Nomascus_leucogenys
ENSSFOG00015010861	c1d	89	68.000	ENSOPRG00000009586	C1D	88	68.000	Ochotona_princeps
ENSSFOG00015010861	c1d	89	68.800	ENSODEG00000011242	-	88	68.800	Octodon_degus
ENSSFOG00015010861	c1d	89	61.600	ENSODEG00000018525	-	88	61.600	Octodon_degus
ENSSFOG00015010861	c1d	89	68.800	ENSODEG00000018885	-	89	68.800	Octodon_degus
ENSSFOG00015010861	c1d	88	72.358	ENSONIG00000001233	c1d	99	64.189	Oreochromis_niloticus
ENSSFOG00015010861	c1d	67	78.723	ENSOANG00000008385	C1D	100	71.171	Ornithorhynchus_anatinus
ENSSFOG00015010861	c1d	89	67.200	ENSOCUG00000025587	-	88	67.200	Oryctolagus_cuniculus
ENSSFOG00015010861	c1d	89	67.200	ENSOCUG00000009771	-	88	67.200	Oryctolagus_cuniculus
ENSSFOG00015010861	c1d	99	65.217	ENSORLG00000021968	c1d	88	65.217	Oryzias_latipes
ENSSFOG00015010861	c1d	96	65.926	ENSORLG00020000507	c1d	88	65.926	Oryzias_latipes_hni
ENSSFOG00015010861	c1d	91	67.442	ENSORLG00015004594	c1d	82	67.442	Oryzias_latipes_hsok
ENSSFOG00015010861	c1d	100	66.429	ENSOMEG00000004672	c1d	87	66.429	Oryzias_melastigma
ENSSFOG00015010861	c1d	89	67.200	ENSOGAG00000027934	-	88	67.200	Otolemur_garnettii
ENSSFOG00015010861	c1d	89	67.742	ENSOARG00000019931	C1D	87	67.742	Ovis_aries
ENSSFOG00015010861	c1d	89	68.800	ENSPPAG00000037847	-	88	68.800	Pan_paniscus
ENSSFOG00015010861	c1d	89	65.323	ENSPPAG00000040091	-	71	65.323	Pan_paniscus
ENSSFOG00015010861	c1d	89	68.800	ENSPPRG00000017045	-	88	68.800	Panthera_pardus
ENSSFOG00015010861	c1d	89	41.600	ENSPPRG00000022830	-	85	41.600	Panthera_pardus
ENSSFOG00015010861	c1d	89	68.800	ENSPTIG00000009414	C1D	88	68.800	Panthera_tigris_altaica
ENSSFOG00015010861	c1d	89	68.800	ENSPTRG00000023558	C1D	88	68.800	Pan_troglodytes
ENSSFOG00015010861	c1d	89	67.200	ENSPANG00000000501	-	88	67.200	Papio_anubis
ENSSFOG00015010861	c1d	89	68.800	ENSPANG00000002886	C1D	69	68.800	Papio_anubis
ENSSFOG00015010861	c1d	93	81.679	ENSPKIG00000004877	c1d	88	81.679	Paramormyrops_kingsleyae
ENSSFOG00015010861	c1d	98	64.539	ENSPSIG00000010015	C1D	97	64.539	Pelodiscus_sinensis
ENSSFOG00015010861	c1d	91	67.188	ENSPMGG00000009326	c1d	90	63.571	Periophthalmus_magnuspinnatus
ENSSFOG00015010861	c1d	99	66.197	ENSPCIG00000018629	-	100	66.197	Phascolarctos_cinereus
ENSSFOG00015010861	c1d	99	58.273	ENSPCIG00000006831	-	97	58.273	Phascolarctos_cinereus
ENSSFOG00015010861	c1d	98	65.693	ENSPFOG00000003686	c1d	89	65.693	Poecilia_formosa
ENSSFOG00015010861	c1d	98	65.693	ENSPLAG00000000228	c1d	97	65.693	Poecilia_latipinna
ENSSFOG00015010861	c1d	98	65.693	ENSPMEG00000023213	c1d	89	65.693	Poecilia_mexicana
ENSSFOG00015010861	c1d	98	66.423	ENSPREG00000000742	c1d	98	64.748	Poecilia_reticulata
ENSSFOG00015010861	c1d	89	65.600	ENSPPYG00000002294	-	88	65.600	Pongo_abelii
ENSSFOG00015010861	c1d	89	68.800	ENSPPYG00000012354	C1D	68	68.800	Pongo_abelii
ENSSFOG00015010861	c1d	89	57.600	ENSPCAG00000010088	C1D	69	57.600	Procavia_capensis
ENSSFOG00015010861	c1d	89	70.400	ENSPCOG00000016112	C1D	88	70.400	Propithecus_coquereli
ENSSFOG00015010861	c1d	89	68.800	ENSPVAG00000012692	C1D	69	68.800	Pteropus_vampyrus
ENSSFOG00015010861	c1d	84	71.795	ENSPNYG00000008789	c1d	89	66.418	Pundamilia_nyererei
ENSSFOG00015010861	c1d	92	70.543	ENSPNAG00000004219	c1d	87	71.654	Pygocentrus_nattereri
ENSSFOG00015010861	c1d	89	68.800	ENSRNOG00000005982	C1d	88	68.800	Rattus_norvegicus
ENSSFOG00015010861	c1d	89	67.200	ENSRBIG00000026211	-	88	67.200	Rhinopithecus_bieti
ENSSFOG00015010861	c1d	89	68.800	ENSRROG00000029013	C1D	88	68.800	Rhinopithecus_roxellana
ENSSFOG00015010861	c1d	89	68.000	ENSRROG00000005944	-	88	68.000	Rhinopithecus_roxellana
ENSSFOG00015010861	c1d	89	68.800	ENSSBOG00000025275	C1D	88	68.800	Saimiri_boliviensis_boliviensis
ENSSFOG00015010861	c1d	99	66.906	ENSSHAG00000008352	C1D	67	66.906	Sarcophilus_harrisii
ENSSFOG00015010861	c1d	100	62.857	ENSSMAG00000019230	c1d	88	62.857	Scophthalmus_maximus
ENSSFOG00015010861	c1d	100	66.429	ENSSDUG00000020213	c1d	90	66.429	Seriola_dumerili
ENSSFOG00015010861	c1d	100	66.429	ENSSLDG00000017371	c1d	90	66.429	Seriola_lalandi_dorsalis
ENSSFOG00015010861	c1d	91	67.442	ENSSPUG00000006525	C1D	100	62.329	Sphenodon_punctatus
ENSSFOG00015010861	c1d	91	70.312	ENSSPAG00000008574	c1d	90	65.714	Stegastes_partitus
ENSSFOG00015010861	c1d	89	68.000	ENSSSCG00000039331	-	88	68.000	Sus_scrofa
ENSSFOG00015010861	c1d	76	57.944	ENSSSCG00000035701	-	89	57.944	Sus_scrofa
ENSSFOG00015010861	c1d	92	65.385	ENSTGUG00000002367	C1D	90	65.385	Taeniopygia_guttata
ENSSFOG00015010861	c1d	99	62.319	ENSTRUG00000012245	c1d	83	62.319	Takifugu_rubripes
ENSSFOG00015010861	c1d	100	64.286	ENSTNIG00000009827	c1d	95	64.286	Tetraodon_nigroviridis
ENSSFOG00015010861	c1d	89	68.800	ENSTBEG00000009797	C1D	88	68.800	Tupaia_belangeri
ENSSFOG00015010861	c1d	89	68.800	ENSTTRG00000013982	C1D	71	68.800	Tursiops_truncatus
ENSSFOG00015010861	c1d	79	61.062	ENSUAMG00000025246	C1D	85	61.062	Ursus_americanus
ENSSFOG00015010861	c1d	73	56.190	ENSUMAG00000006451	-	91	56.140	Ursus_maritimus
ENSSFOG00015010861	c1d	89	68.800	ENSUMAG00000021118	-	88	68.800	Ursus_maritimus
ENSSFOG00015010861	c1d	89	68.800	ENSVPAG00000012080	C1D	70	68.800	Vicugna_pacos
ENSSFOG00015010861	c1d	89	69.600	ENSVVUG00000027629	C1D	78	69.600	Vulpes_vulpes
ENSSFOG00015010861	c1d	99	60.417	ENSXETG00000025934	c1d	99	60.417	Xenopus_tropicalis
ENSSFOG00015010861	c1d	91	70.079	ENSXCOG00000013813	c1d	89	65.693	Xiphophorus_couchianus
ENSSFOG00015010861	c1d	91	70.866	ENSXMAG00000022273	c1d	89	66.423	Xiphophorus_maculatus