EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015010891 (Gene tree)
Gene ID: 108925354
Gene Symbol: si:ch211-153b23.4
Alias: fj08f03|fj10b02|im:7041150|wu:fj08f03|wu:fj10b02
Full Name: uncharacterized LOC108925354
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 5824 bases
Position: chrKV410842.1:7788059-7793882
Accession: 108925354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015016921	Sua5_yciO_yrdC	PF01300.18	2.5e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015017110	-	3989	XM_018737204	ENSSFOP00015016921	866 (aa)	XP_018592720	A0A1W4YWC1

Gene Model

Click here to download ENSSFOG00015010891's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015010891's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015010891	si:ch211-153b23.4	59	34.405	ENSSFOG00015009030	-	84	34.375
ENSSFOG00015010891	si:ch211-153b23.4	99	75.827	ENSSFOG00015003920	-	99	75.827

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015010891	si:ch211-153b23.4	99	69.470	ENSAPOG00000006178	si:ch211-153b23.4	98	69.124	Acanthochromis_polyacanthus
ENSSFOG00015010891	si:ch211-153b23.4	94	71.533	ENSAPOG00000006144	si:ch211-153b23.4	94	72.422	Acanthochromis_polyacanthus
ENSSFOG00015010891	si:ch211-153b23.4	95	72.727	ENSACIG00000006997	si:ch211-153b23.4	97	72.727	Amphilophus_citrinellus
ENSSFOG00015010891	si:ch211-153b23.4	60	32.961	ENSAOCG00000010974	si:ch211-153b23.3	59	32.961	Amphiprion_ocellaris
ENSSFOG00015010891	si:ch211-153b23.4	90	70.955	ENSAOCG00000010999	si:ch211-153b23.4	95	70.955	Amphiprion_ocellaris
ENSSFOG00015010891	si:ch211-153b23.4	97	69.441	ENSAPEG00000014665	si:ch211-153b23.4	99	69.441	Amphiprion_percula
ENSSFOG00015010891	si:ch211-153b23.4	60	32.210	ENSAPEG00000014700	si:ch211-153b23.3	59	32.210	Amphiprion_percula
ENSSFOG00015010891	si:ch211-153b23.4	97	73.690	ENSATEG00000004948	si:ch211-153b23.4	96	73.690	Anabas_testudineus
ENSSFOG00015010891	si:ch211-153b23.4	95	63.075	ENSAPLG00000013596	-	99	63.075	Anas_platyrhynchos
ENSSFOG00015010891	si:ch211-153b23.4	99	70.853	ENSACLG00000005471	si:ch211-153b23.4	98	70.853	Astatotilapia_calliptera
ENSSFOG00015010891	si:ch211-153b23.4	96	73.955	ENSAMXG00000013879	si:ch211-153b23.4	99	73.113	Astyanax_mexicanus
ENSSFOG00015010891	si:ch211-153b23.4	95	70.617	ENSCSEG00000014838	si:ch211-153b23.4	98	70.617	Cynoglossus_semilaevis
ENSSFOG00015010891	si:ch211-153b23.4	59	34.340	ENSCSEG00000014853	si:ch211-153b23.3	58	34.340	Cynoglossus_semilaevis
ENSSFOG00015010891	si:ch211-153b23.4	93	71.941	ENSCVAG00000021145	si:ch211-153b23.4	100	71.941	Cyprinodon_variegatus
ENSSFOG00015010891	si:ch211-153b23.4	99	68.565	ENSDARG00000077169	si:ch211-153b23.4	99	68.565	Danio_rerio
ENSSFOG00015010891	si:ch211-153b23.4	52	35.242	ENSDARG00000104919	si:ch211-153b23.3	50	35.242	Danio_rerio
ENSSFOG00015010891	si:ch211-153b23.4	99	69.988	ENSELUG00000004961	si:ch211-153b23.4	97	69.988	Esox_lucius
ENSSFOG00015010891	si:ch211-153b23.4	97	57.651	ENSFALG00000011343	-	97	57.651	Ficedula_albicollis
ENSSFOG00015010891	si:ch211-153b23.4	81	80.597	ENSFHEG00000009888	si:ch211-153b23.4	79	80.597	Fundulus_heteroclitus
ENSSFOG00015010891	si:ch211-153b23.4	92	71.750	ENSFHEG00000010001	si:ch211-153b23.4	99	71.750	Fundulus_heteroclitus
ENSSFOG00015010891	si:ch211-153b23.4	89	70.876	ENSGAFG00000007442	si:ch211-153b23.4	93	70.876	Gambusia_affinis
ENSSFOG00015010891	si:ch211-153b23.4	60	33.208	ENSGAFG00000007455	si:ch211-153b23.3	59	33.208	Gambusia_affinis
ENSSFOG00015010891	si:ch211-153b23.4	97	71.378	ENSGACG00000018253	si:ch211-153b23.4	99	71.378	Gasterosteus_aculeatus
ENSSFOG00015010891	si:ch211-153b23.4	83	64.966	ENSGAGG00000024601	-	99	63.807	Gopherus_agassizii
ENSSFOG00015010891	si:ch211-153b23.4	92	64.484	ENSHBUG00000000013	si:ch211-153b23.4	97	64.484	Haplochromis_burtoni
ENSSFOG00015010891	si:ch211-153b23.4	96	73.565	ENSIPUG00000015205	si:ch211-153b23.4	99	73.565	Ictalurus_punctatus
ENSSFOG00015010891	si:ch211-153b23.4	54	33.962	ENSIPUG00000015213	si:ch211-153b23.3	54	34.100	Ictalurus_punctatus
ENSSFOG00015010891	si:ch211-153b23.4	67	31.639	ENSKMAG00000006792	si:ch211-153b23.3	67	31.639	Kryptolebias_marmoratus
ENSSFOG00015010891	si:ch211-153b23.4	94	72.583	ENSKMAG00000006829	si:ch211-153b23.4	100	72.583	Kryptolebias_marmoratus
ENSSFOG00015010891	si:ch211-153b23.4	99	69.205	ENSKMAG00000006919	-	99	69.205	Kryptolebias_marmoratus
ENSSFOG00015010891	si:ch211-153b23.4	99	71.611	ENSLBEG00000026309	si:ch211-153b23.4	99	71.611	Labrus_bergylta
ENSSFOG00015010891	si:ch211-153b23.4	95	65.707	ENSLACG00000017592	si:ch211-153b23.4	99	65.707	Latimeria_chalumnae
ENSSFOG00015010891	si:ch211-153b23.4	95	73.646	ENSMAMG00000009277	si:ch211-153b23.4	100	73.646	Mastacembelus_armatus
ENSSFOG00015010891	si:ch211-153b23.4	94	75.154	ENSMAMG00000009358	si:ch211-153b23.4	99	75.154	Mastacembelus_armatus
ENSSFOG00015010891	si:ch211-153b23.4	94	72.079	ENSMZEG00005011433	si:ch211-153b23.4	99	72.079	Maylandia_zebra
ENSSFOG00015010891	si:ch211-153b23.4	94	62.864	ENSMGAG00000005478	-	99	62.864	Meleagris_gallopavo
ENSSFOG00015010891	si:ch211-153b23.4	93	73.053	ENSMMOG00000004425	si:ch211-153b23.4	100	73.053	Mola_mola
ENSSFOG00015010891	si:ch211-153b23.4	92	72.522	ENSNBRG00000013392	si:ch211-153b23.4	100	72.522	Neolamprologus_brichardi
ENSSFOG00015010891	si:ch211-153b23.4	99	70.332	ENSONIG00000017875	si:ch211-153b23.4	99	70.332	Oreochromis_niloticus
ENSSFOG00015010891	si:ch211-153b23.4	99	68.298	ENSORLG00000006169	si:ch211-153b23.4	98	68.298	Oryzias_latipes
ENSSFOG00015010891	si:ch211-153b23.4	74	30.060	ENSORLG00000006161	si:ch211-153b23.3	75	30.060	Oryzias_latipes
ENSSFOG00015010891	si:ch211-153b23.4	99	68.531	ENSORLG00020009905	si:ch211-153b23.4	98	68.531	Oryzias_latipes_hni
ENSSFOG00015010891	si:ch211-153b23.4	95	69.964	ENSORLG00015003709	si:ch211-153b23.4	95	69.964	Oryzias_latipes_hsok
ENSSFOG00015010891	si:ch211-153b23.4	59	32.348	ENSOMEG00000007661	si:ch211-153b23.3	60	32.348	Oryzias_melastigma
ENSSFOG00015010891	si:ch211-153b23.4	97	69.104	ENSOMEG00000007682	si:ch211-153b23.4	98	68.208	Oryzias_melastigma
ENSSFOG00015010891	si:ch211-153b23.4	99	72.727	ENSPKIG00000014429	si:ch211-153b23.4	100	72.459	Paramormyrops_kingsleyae
ENSSFOG00015010891	si:ch211-153b23.4	99	77.894	ENSPKIG00000025681	si:ch211-153b23.4	99	77.894	Paramormyrops_kingsleyae
ENSSFOG00015010891	si:ch211-153b23.4	93	60.174	ENSPMGG00000001313	si:ch211-153b23.4	90	60.174	Periophthalmus_magnuspinnatus
ENSSFOG00015010891	si:ch211-153b23.4	78	74.779	ENSPFOG00000012164	si:ch211-153b23.4	95	74.779	Poecilia_formosa
ENSSFOG00015010891	si:ch211-153b23.4	60	32.270	ENSPFOG00000012289	si:ch211-153b23.3	59	32.458	Poecilia_formosa
ENSSFOG00015010891	si:ch211-153b23.4	59	32.768	ENSPLAG00000016320	si:ch211-153b23.3	59	32.768	Poecilia_latipinna
ENSSFOG00015010891	si:ch211-153b23.4	93	71.553	ENSPLAG00000016295	si:ch211-153b23.4	100	71.553	Poecilia_latipinna
ENSSFOG00015010891	si:ch211-153b23.4	60	32.270	ENSPMEG00000008884	si:ch211-153b23.3	59	32.270	Poecilia_mexicana
ENSSFOG00015010891	si:ch211-153b23.4	91	70.581	ENSPMEG00000007538	si:ch211-153b23.4	96	70.492	Poecilia_mexicana
ENSSFOG00015010891	si:ch211-153b23.4	94	71.956	ENSPNYG00000000250	si:ch211-153b23.4	99	71.956	Pundamilia_nyererei
ENSSFOG00015010891	si:ch211-153b23.4	99	73.160	ENSPNAG00000019554	si:ch211-153b23.4	99	73.160	Pygocentrus_nattereri
ENSSFOG00015010891	si:ch211-153b23.4	54	33.193	ENSSMAG00000005446	si:ch211-153b23.3	53	33.193	Scophthalmus_maximus
ENSSFOG00015010891	si:ch211-153b23.4	99	71.810	ENSSMAG00000010067	si:ch211-153b23.4	99	71.810	Scophthalmus_maximus
ENSSFOG00015010891	si:ch211-153b23.4	93	74.289	ENSSDUG00000006671	si:ch211-153b23.4	100	74.289	Seriola_dumerili
ENSSFOG00015010891	si:ch211-153b23.4	83	70.627	ENSSDUG00000006842	si:ch211-153b23.4	92	70.627	Seriola_dumerili
ENSSFOG00015010891	si:ch211-153b23.4	77	72.321	ENSSDUG00000006931	si:ch211-153b23.4	92	72.321	Seriola_dumerili
ENSSFOG00015010891	si:ch211-153b23.4	94	62.469	ENSTGUG00000005499	-	99	62.469	Taeniopygia_guttata
ENSSFOG00015010891	si:ch211-153b23.4	93	72.188	ENSTRUG00000003247	si:ch211-153b23.4	100	72.188	Takifugu_rubripes
ENSSFOG00015010891	si:ch211-153b23.4	58	33.988	ENSTRUG00000020530	si:ch211-153b23.3	57	33.988	Takifugu_rubripes
ENSSFOG00015010891	si:ch211-153b23.4	95	70.517	ENSTNIG00000008958	si:ch211-153b23.4	99	70.517	Tetraodon_nigroviridis
ENSSFOG00015010891	si:ch211-153b23.4	99	57.848	ENSXETG00000004489	-	97	57.848	Xenopus_tropicalis
ENSSFOG00015010891	si:ch211-153b23.4	96	71.823	ENSXMAG00000021388	si:ch211-153b23.4	99	71.823	Xiphophorus_maculatus
ENSSFOG00015010891	si:ch211-153b23.4	96	70.059	ENSXMAG00000009416	-	99	70.059	Xiphophorus_maculatus
ENSSFOG00015010891	si:ch211-153b23.4	60	33.396	ENSXMAG00000029318	si:ch211-153b23.3	59	33.396	Xiphophorus_maculatus