EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015011040 (Gene tree)
Gene ID: 108933420
Gene Symbol: nup153
Alias: fd23d09|si:ch211-153f2.5|wu:fd23d09
Full Name: nucleoporin 153
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 18129 bases
Position: chrKV411026.1:1679944-1698072
Accession: 108933420
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015017175	zf-RanBP	PF00641.18	2.8e-36	1	4
ENSSFOP00015017175	zf-RanBP	PF00641.18	2.8e-36	2	4
ENSSFOP00015017175	zf-RanBP	PF00641.18	2.8e-36	3	4
ENSSFOP00015017175	zf-RanBP	PF00641.18	2.8e-36	4	4
ENSSFOP00015017141	zf-RanBP	PF00641.18	3.1e-36	1	4
ENSSFOP00015017141	zf-RanBP	PF00641.18	3.1e-36	2	4
ENSSFOP00015017141	zf-RanBP	PF00641.18	3.1e-36	3	4
ENSSFOP00015017141	zf-RanBP	PF00641.18	3.1e-36	4	4
ENSSFOP00015017125	zf-RanBP	PF00641.18	3.3e-36	1	4
ENSSFOP00015017125	zf-RanBP	PF00641.18	3.3e-36	2	4
ENSSFOP00015017125	zf-RanBP	PF00641.18	3.3e-36	3	4
ENSSFOP00015017125	zf-RanBP	PF00641.18	3.3e-36	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015017371	-	5937	-	ENSSFOP00015017175	1476 (aa)	-	-
ENSSFOT00015017319	-	6099	XM_018750471	ENSSFOP00015017125	1530 (aa)	XP_018605987	A0A1W4ZQM0
ENSSFOT00015017337	-	6054	XM_018750472	ENSSFOP00015017141	1515 (aa)	XP_018605988	A0A1W4ZYI7

Gene Model

Click here to download ENSSFOG00015011040's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015011040's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015011040	nup153	99	41.636	ENSG00000124789	NUP153	99	40.859	Homo_sapiens
ENSSFOG00015011040	nup153	61	54.960	ENSAPOG00000019495	nup153	100	50.089	Acanthochromis_polyacanthus
ENSSFOG00015011040	nup153	99	41.600	ENSAMEG00000000721	NUP153	99	41.220	Ailuropoda_melanoleuca
ENSSFOG00015011040	nup153	100	49.500	ENSACIG00000010784	nup153	100	48.568	Amphilophus_citrinellus
ENSSFOG00015011040	nup153	100	50.839	ENSAOCG00000007098	nup153	100	50.245	Amphiprion_ocellaris
ENSSFOG00015011040	nup153	100	51.919	ENSAPEG00000012075	nup153	100	50.909	Amphiprion_percula
ENSSFOG00015011040	nup153	100	51.002	ENSATEG00000014134	nup153	100	50.335	Anabas_testudineus
ENSSFOG00015011040	nup153	98	38.390	ENSACAG00000004118	NUP153	99	37.961	Anolis_carolinensis
ENSSFOG00015011040	nup153	99	41.433	ENSANAG00000001808	NUP153	99	40.517	Aotus_nancymaae
ENSSFOG00015011040	nup153	100	50.000	ENSACLG00000016592	nup153	99	49.574	Astatotilapia_calliptera
ENSSFOG00015011040	nup153	100	48.811	ENSAMXG00000021025	nup153	100	51.657	Astyanax_mexicanus
ENSSFOG00015011040	nup153	99	42.082	ENSBTAG00000017128	NUP153	99	41.173	Bos_taurus
ENSSFOG00015011040	nup153	99	41.952	ENSCJAG00000006685	NUP153	99	41.032	Callithrix_jacchus
ENSSFOG00015011040	nup153	99	41.126	ENSCAFG00000010146	NUP153	99	42.292	Canis_familiaris
ENSSFOG00015011040	nup153	99	41.213	ENSCAFG00020010901	NUP153	99	41.007	Canis_lupus_dingo
ENSSFOG00015011040	nup153	99	40.844	ENSCHIG00000023764	NUP153	99	40.345	Capra_hircus
ENSSFOG00015011040	nup153	98	40.969	ENSTSYG00000001251	NUP153	98	40.176	Carlito_syrichta
ENSSFOG00015011040	nup153	99	39.975	ENSCPOG00000004007	NUP153	99	39.090	Cavia_porcellus
ENSSFOG00015011040	nup153	99	39.987	ENSCCAG00000024038	NUP153	99	39.119	Cebus_capucinus
ENSSFOG00015011040	nup153	99	42.503	ENSCATG00000041429	NUP153	99	41.411	Cercocebus_atys
ENSSFOG00015011040	nup153	99	40.435	ENSCLAG00000001915	NUP153	99	40.283	Chinchilla_lanigera
ENSSFOG00015011040	nup153	99	42.477	ENSCSAG00000007624	NUP153	99	41.447	Chlorocebus_sabaeus
ENSSFOG00015011040	nup153	52	39.951	ENSCHOG00000003510	-	60	39.920	Choloepus_hoffmanni
ENSSFOG00015011040	nup153	70	40.413	ENSCHOG00000008316	-	61	40.289	Choloepus_hoffmanni
ENSSFOG00015011040	nup153	99	42.644	ENSCPBG00000008333	NUP153	99	42.229	Chrysemys_picta_bellii
ENSSFOG00015011040	nup153	99	40.954	ENSCANG00000033390	NUP153	99	39.939	Colobus_angolensis_palliatus
ENSSFOG00015011040	nup153	99	41.677	ENSCGRG00001021016	Nup153	99	40.197	Cricetulus_griseus_chok1gshd
ENSSFOG00015011040	nup153	98	41.525	ENSCGRG00000009244	Nup153	100	39.975	Cricetulus_griseus_crigri
ENSSFOG00015011040	nup153	100	48.793	ENSCSEG00000017912	nup153	99	47.684	Cynoglossus_semilaevis
ENSSFOG00015011040	nup153	82	59.098	ENSCVAG00000020646	nup153	99	46.410	Cyprinodon_variegatus
ENSSFOG00015011040	nup153	100	51.947	ENSDARG00000099972	nup153	100	51.980	Danio_rerio
ENSSFOG00015011040	nup153	99	41.264	ENSDNOG00000001153	NUP153	99	40.795	Dasypus_novemcinctus
ENSSFOG00015011040	nup153	99	40.814	ENSDORG00000001736	Nup153	99	39.509	Dipodomys_ordii
ENSSFOG00015011040	nup153	99	41.042	ENSEASG00005009945	NUP153	99	40.481	Equus_asinus_asinus
ENSSFOG00015011040	nup153	99	41.460	ENSECAG00000016010	NUP153	99	40.873	Equus_caballus
ENSSFOG00015011040	nup153	71	47.342	ENSEEUG00000010183	NUP153	75	46.724	Erinaceus_europaeus
ENSSFOG00015011040	nup153	100	51.661	ENSELUG00000019108	nup153	100	50.654	Esox_lucius
ENSSFOG00015011040	nup153	99	40.633	ENSFCAG00000011583	NUP153	99	40.257	Felis_catus
ENSSFOG00015011040	nup153	95	40.209	ENSFALG00000013388	NUP153	99	40.366	Ficedula_albicollis
ENSSFOG00015011040	nup153	93	61.663	ENSFHEG00000013401	nup153	99	61.379	Fundulus_heteroclitus
ENSSFOG00015011040	nup153	90	53.503	ENSGMOG00000010422	nup153	92	52.866	Gadus_morhua
ENSSFOG00015011040	nup153	99	41.986	ENSGALG00000012720	NUP153	99	42.303	Gallus_gallus
ENSSFOG00015011040	nup153	100	47.893	ENSGAFG00000010927	nup153	100	47.253	Gambusia_affinis
ENSSFOG00015011040	nup153	99	48.642	ENSGACG00000005389	nup153	100	48.210	Gasterosteus_aculeatus
ENSSFOG00015011040	nup153	99	42.396	ENSGAGG00000022386	NUP153	99	41.955	Gopherus_agassizii
ENSSFOG00015011040	nup153	99	40.732	ENSGGOG00000014261	NUP153	99	40.184	Gorilla_gorilla
ENSSFOG00015011040	nup153	100	50.182	ENSHBUG00000002944	nup153	99	50.031	Haplochromis_burtoni
ENSSFOG00015011040	nup153	99	40.426	ENSHGLG00000007924	NUP153	99	40.162	Heterocephalus_glaber_female
ENSSFOG00015011040	nup153	99	40.426	ENSHGLG00100001529	NUP153	99	40.162	Heterocephalus_glaber_male
ENSSFOG00015011040	nup153	100	44.828	ENSHCOG00000019361	nup153	100	45.954	Hippocampus_comes
ENSSFOG00015011040	nup153	100	52.152	ENSIPUG00000014605	nup153	100	51.677	Ictalurus_punctatus
ENSSFOG00015011040	nup153	98	40.736	ENSSTOG00000005807	NUP153	100	39.562	Ictidomys_tridecemlineatus
ENSSFOG00015011040	nup153	99	41.384	ENSJJAG00000016760	Nup153	99	40.977	Jaculus_jaculus
ENSSFOG00015011040	nup153	100	48.490	ENSKMAG00000006344	nup153	100	49.116	Kryptolebias_marmoratus
ENSSFOG00015011040	nup153	100	49.477	ENSLBEG00000002982	nup153	99	49.041	Labrus_bergylta
ENSSFOG00015011040	nup153	98	39.401	ENSLACG00000006480	NUP153	99	38.122	Latimeria_chalumnae
ENSSFOG00015011040	nup153	100	51.139	ENSLOCG00000008267	nup153	100	50.443	Lepisosteus_oculatus
ENSSFOG00015011040	nup153	99	41.953	ENSLAFG00000015905	NUP153	99	41.337	Loxodonta_africana
ENSSFOG00015011040	nup153	99	42.503	ENSMFAG00000045732	NUP153	99	41.472	Macaca_fascicularis
ENSSFOG00015011040	nup153	99	42.565	ENSMMUG00000001993	NUP153	99	41.534	Macaca_mulatta
ENSSFOG00015011040	nup153	99	42.565	ENSMNEG00000038011	NUP153	99	41.534	Macaca_nemestrina
ENSSFOG00015011040	nup153	99	42.565	ENSMLEG00000030776	NUP153	99	41.472	Mandrillus_leucophaeus
ENSSFOG00015011040	nup153	100	49.940	ENSMAMG00000013184	nup153	99	50.122	Mastacembelus_armatus
ENSSFOG00015011040	nup153	100	49.194	ENSMZEG00005004371	nup153	100	49.247	Maylandia_zebra
ENSSFOG00015011040	nup153	98	41.598	ENSMGAG00000003139	NUP153	99	42.159	Meleagris_gallopavo
ENSSFOG00015011040	nup153	93	48.936	ENSMAUG00000007737	Nup153	84	41.499	Mesocricetus_auratus
ENSSFOG00015011040	nup153	99	41.579	ENSMICG00000006089	NUP153	99	41.600	Microcebus_murinus
ENSSFOG00015011040	nup153	99	41.958	ENSMOCG00000007623	Nup153	99	40.926	Microtus_ochrogaster
ENSSFOG00015011040	nup153	88	55.811	ENSMMOG00000019049	nup153	100	51.724	Mola_mola
ENSSFOG00015011040	nup153	98	40.199	ENSMODG00000010951	NUP153	99	40.392	Monodelphis_domestica
ENSSFOG00015011040	nup153	64	53.254	ENSMALG00000013995	nup153	100	48.721	Monopterus_albus
ENSSFOG00015011040	nup153	99	41.294	MGP_CAROLIEiJ_G0018483	Nup153	99	40.713	Mus_caroli
ENSSFOG00015011040	nup153	99	41.568	ENSMUSG00000021374	Nup153	99	40.764	Mus_musculus
ENSSFOG00015011040	nup153	99	41.220	MGP_PahariEiJ_G0019551	Nup153	99	40.836	Mus_pahari
ENSSFOG00015011040	nup153	99	41.522	MGP_SPRETEiJ_G0019363	Nup153	99	40.965	Mus_spretus
ENSSFOG00015011040	nup153	99	40.098	ENSMLUG00000004775	NUP153	99	39.180	Myotis_lucifugus
ENSSFOG00015011040	nup153	99	41.077	ENSNGAG00000013817	Nup153	99	39.720	Nannospalax_galili
ENSSFOG00015011040	nup153	100	49.722	ENSNBRG00000012456	nup153	100	48.538	Neolamprologus_brichardi
ENSSFOG00015011040	nup153	99	42.291	ENSNLEG00000001141	NUP153	99	41.140	Nomascus_leucogenys
ENSSFOG00015011040	nup153	75	65.517	ENSMEUG00000012874	NUP153	82	47.115	Notamacropus_eugenii
ENSSFOG00015011040	nup153	84	44.118	ENSOPRG00000006221	NUP153	83	43.604	Ochotona_princeps
ENSSFOG00015011040	nup153	99	38.659	ENSODEG00000005620	NUP153	99	38.279	Octodon_degus
ENSSFOG00015011040	nup153	100	49.393	ENSONIG00000002524	nup153	99	50.122	Oreochromis_niloticus
ENSSFOG00015011040	nup153	98	42.207	ENSOANG00000011858	NUP153	99	41.554	Ornithorhynchus_anatinus
ENSSFOG00015011040	nup153	99	40.732	ENSOCUG00000003064	NUP153	99	40.704	Oryctolagus_cuniculus
ENSSFOG00015011040	nup153	100	47.192	ENSORLG00000012674	nup153	99	46.879	Oryzias_latipes
ENSSFOG00015011040	nup153	100	46.955	ENSORLG00020006026	nup153	99	47.170	Oryzias_latipes_hni
ENSSFOG00015011040	nup153	100	46.707	ENSORLG00015013823	nup153	99	46.911	Oryzias_latipes_hsok
ENSSFOG00015011040	nup153	100	46.671	ENSOMEG00000012062	nup153	100	47.831	Oryzias_melastigma
ENSSFOG00015011040	nup153	99	40.939	ENSOGAG00000014899	NUP153	99	39.940	Otolemur_garnettii
ENSSFOG00015011040	nup153	98	39.726	ENSOARG00000011514	NUP153	99	39.963	Ovis_aries
ENSSFOG00015011040	nup153	99	41.352	ENSPPAG00000029729	NUP153	99	40.859	Pan_paniscus
ENSSFOG00015011040	nup153	99	40.782	ENSPPRG00000006160	NUP153	99	40.368	Panthera_pardus
ENSSFOG00015011040	nup153	99	40.534	ENSPTIG00000017212	NUP153	99	40.074	Panthera_tigris_altaica
ENSSFOG00015011040	nup153	99	41.352	ENSPTRG00000017752	NUP153	99	40.859	Pan_troglodytes
ENSSFOG00015011040	nup153	99	42.689	ENSPANG00000015139	NUP153	99	41.595	Papio_anubis
ENSSFOG00015011040	nup153	100	57.291	ENSPKIG00000001734	nup153	100	57.017	Paramormyrops_kingsleyae
ENSSFOG00015011040	nup153	98	41.531	ENSPSIG00000017226	NUP153	99	42.122	Pelodiscus_sinensis
ENSSFOG00015011040	nup153	100	47.733	ENSPMGG00000001716	nup153	100	47.037	Periophthalmus_magnuspinnatus
ENSSFOG00015011040	nup153	99	41.899	ENSPEMG00000020772	Nup153	99	40.750	Peromyscus_maniculatus_bairdii
ENSSFOG00015011040	nup153	51	58.000	ENSPMAG00000002487	-	100	64.865	Petromyzon_marinus
ENSSFOG00015011040	nup153	99	41.535	ENSPCIG00000029680	NUP153	99	41.492	Phascolarctos_cinereus
ENSSFOG00015011040	nup153	100	48.353	ENSPFOG00000013146	nup153	99	47.866	Poecilia_formosa
ENSSFOG00015011040	nup153	100	49.385	ENSPMEG00000021677	nup153	99	48.485	Poecilia_mexicana
ENSSFOG00015011040	nup153	100	49.331	ENSPREG00000007463	nup153	99	48.440	Poecilia_reticulata
ENSSFOG00015011040	nup153	99	40.929	ENSPPYG00000016259	NUP153	99	40.478	Pongo_abelii
ENSSFOG00015011040	nup153	66	46.364	ENSPCAG00000010444	NUP153	62	46.429	Procavia_capensis
ENSSFOG00015011040	nup153	99	41.242	ENSPCOG00000014488	NUP153	99	40.750	Propithecus_coquereli
ENSSFOG00015011040	nup153	93	39.578	ENSPVAG00000012632	NUP153	99	38.722	Pteropus_vampyrus
ENSSFOG00015011040	nup153	100	50.212	ENSPNYG00000011225	nup153	100	49.908	Pundamilia_nyererei
ENSSFOG00015011040	nup153	100	53.622	ENSPNAG00000024377	nup153	100	52.923	Pygocentrus_nattereri
ENSSFOG00015011040	nup153	99	40.472	ENSRNOG00000001456	Nup153	99	40.761	Rattus_norvegicus
ENSSFOG00015011040	nup153	99	42.154	ENSRBIG00000041878	NUP153	99	40.948	Rhinopithecus_bieti
ENSSFOG00015011040	nup153	98	42.315	ENSRROG00000029849	NUP153	99	41.188	Rhinopithecus_roxellana
ENSSFOG00015011040	nup153	99	41.806	ENSSBOG00000024532	NUP153	99	41.007	Saimiri_boliviensis_boliviensis
ENSSFOG00015011040	nup153	63	37.303	ENSSHAG00000016087	-	99	40.282	Sarcophilus_harrisii
ENSSFOG00015011040	nup153	100	49.430	ENSSMAG00000008418	nup153	99	48.707	Scophthalmus_maximus
ENSSFOG00015011040	nup153	61	57.846	ENSSDUG00000010779	nup153	100	51.088	Seriola_dumerili
ENSSFOG00015011040	nup153	98	57.717	ENSSLDG00000012692	nup153	100	49.781	Seriola_lalandi_dorsalis
ENSSFOG00015011040	nup153	87	51.622	ENSSARG00000013269	NUP153	100	38.298	Sorex_araneus
ENSSFOG00015011040	nup153	99	42.317	ENSSPUG00000016687	NUP153	99	42.105	Sphenodon_punctatus
ENSSFOG00015011040	nup153	100	50.638	ENSSPAG00000014945	nup153	99	50.485	Stegastes_partitus
ENSSFOG00015011040	nup153	99	41.547	ENSSSCG00000026034	NUP153	99	40.531	Sus_scrofa
ENSSFOG00015011040	nup153	98	39.610	ENSTGUG00000005917	NUP153	100	39.532	Taeniopygia_guttata
ENSSFOG00015011040	nup153	100	47.959	ENSTRUG00000010163	nup153	100	47.116	Takifugu_rubripes
ENSSFOG00015011040	nup153	99	48.105	ENSTNIG00000009182	nup153	100	46.736	Tetraodon_nigroviridis
ENSSFOG00015011040	nup153	61	42.282	ENSTBEG00000004161	NUP153	62	41.275	Tupaia_belangeri
ENSSFOG00015011040	nup153	63	38.469	ENSUAMG00000015215	NUP153	98	38.185	Ursus_americanus
ENSSFOG00015011040	nup153	98	39.001	ENSUMAG00000017135	NUP153	99	38.941	Ursus_maritimus
ENSSFOG00015011040	nup153	99	41.739	ENSVPAG00000002072	NUP153	99	40.284	Vicugna_pacos
ENSSFOG00015011040	nup153	99	41.460	ENSVVUG00000003265	NUP153	99	42.292	Vulpes_vulpes
ENSSFOG00015011040	nup153	99	39.076	ENSXETG00000014197	nup153	99	37.477	Xenopus_tropicalis
ENSSFOG00015011040	nup153	100	48.114	ENSXCOG00000020098	nup153	100	47.238	Xiphophorus_couchianus
ENSSFOG00015011040	nup153	100	50.185	ENSXMAG00000003437	nup153	99	48.765	Xiphophorus_maculatus