EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015011151 (Gene tree)
Gene ID: 108941286
Gene Symbol: ddb1
Alias: zgc:63840
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 13969 bases
Position: chrKV411217.1:14678034-14692002
Accession: 108941286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015017367	CPSF_A	PF03178.15	3.1e-76	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015017564	-	3459	XM_018764014	ENSSFOP00015017367	1111 (aa)	XP_018619530	-

Gene Model

Click here to download ENSSFOG00015011151's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03420	Nucleotide excision repair	KEGG
sfm04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015011151's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015011151	ddb1	97	91.357	ENSG00000167986	DDB1	100	96.575	Homo_sapiens
ENSSFOG00015011151	ddb1	97	96.375	ENSAPOG00000005036	ddb1	99	96.531	Acanthochromis_polyacanthus
ENSSFOG00015011151	ddb1	97	91.450	ENSAMEG00000016518	DDB1	94	91.450	Ailuropoda_melanoleuca
ENSSFOG00015011151	ddb1	88	96.122	ENSACIG00000020624	ddb1	99	96.122	Amphilophus_citrinellus
ENSSFOG00015011151	ddb1	97	96.468	ENSAOCG00000003066	ddb1	94	96.468	Amphiprion_ocellaris
ENSSFOG00015011151	ddb1	98	95.868	ENSAPEG00000000092	ddb1	99	95.868	Amphiprion_percula
ENSSFOG00015011151	ddb1	97	96.392	ENSATEG00000020571	ddb1	98	96.392	Anabas_testudineus
ENSSFOG00015011151	ddb1	97	89.084	ENSAPLG00000007174	DDB1	94	89.084	Anas_platyrhynchos
ENSSFOG00015011151	ddb1	97	91.450	ENSACAG00000017758	DDB1	94	91.450	Anolis_carolinensis
ENSSFOG00015011151	ddb1	97	91.357	ENSANAG00000021878	DDB1	94	91.357	Aotus_nancymaae
ENSSFOG00015011151	ddb1	97	96.190	ENSACLG00000012401	ddb1	99	95.749	Astatotilapia_calliptera
ENSSFOG00015011151	ddb1	97	91.357	ENSBTAG00000021569	DDB1	88	91.357	Bos_taurus
ENSSFOG00015011151	ddb1	97	37.060	WBGene00010890	ddb-1	95	37.060	Caenorhabditis_elegans
ENSSFOG00015011151	ddb1	97	91.357	ENSCJAG00000019319	DDB1	94	91.357	Callithrix_jacchus
ENSSFOG00015011151	ddb1	97	91.814	ENSCAFG00000016264	DDB1	99	91.814	Canis_familiaris
ENSSFOG00015011151	ddb1	97	91.814	ENSCAFG00020012722	DDB1	99	91.814	Canis_lupus_dingo
ENSSFOG00015011151	ddb1	97	91.357	ENSCHIG00000014969	DDB1	94	91.357	Capra_hircus
ENSSFOG00015011151	ddb1	97	90.985	ENSTSYG00000008027	DDB1	94	90.985	Carlito_syrichta
ENSSFOG00015011151	ddb1	95	91.469	ENSCAPG00000010786	DDB1	94	91.469	Cavia_aperea
ENSSFOG00015011151	ddb1	97	91.450	ENSCPOG00000009956	DDB1	94	91.450	Cavia_porcellus
ENSSFOG00015011151	ddb1	97	91.357	ENSCCAG00000035883	DDB1	94	91.357	Cebus_capucinus
ENSSFOG00015011151	ddb1	96	89.547	ENSCATG00000044495	DDB1	94	89.547	Cercocebus_atys
ENSSFOG00015011151	ddb1	97	91.357	ENSCLAG00000004126	DDB1	94	91.357	Chinchilla_lanigera
ENSSFOG00015011151	ddb1	97	91.357	ENSCSAG00000006392	DDB1	94	91.357	Chlorocebus_sabaeus
ENSSFOG00015011151	ddb1	86	84.521	ENSCHOG00000011377	DDB1	86	84.521	Choloepus_hoffmanni
ENSSFOG00015011151	ddb1	97	91.171	ENSCPBG00000017728	DDB1	94	91.171	Chrysemys_picta_bellii
ENSSFOG00015011151	ddb1	97	61.581	ENSCING00000007437	-	94	61.581	Ciona_intestinalis
ENSSFOG00015011151	ddb1	90	60.806	ENSCSAVG00000004783	-	100	60.523	Ciona_savignyi
ENSSFOG00015011151	ddb1	97	91.357	ENSCANG00000019948	DDB1	94	91.357	Colobus_angolensis_palliatus
ENSSFOG00015011151	ddb1	97	91.450	ENSCGRG00001016599	Ddb1	98	90.672	Cricetulus_griseus_chok1gshd
ENSSFOG00015011151	ddb1	97	91.450	ENSCGRG00000013427	Ddb1	94	91.450	Cricetulus_griseus_crigri
ENSSFOG00015011151	ddb1	95	96.324	ENSCSEG00000012499	ddb1	99	94.636	Cynoglossus_semilaevis
ENSSFOG00015011151	ddb1	97	95.640	ENSCVAG00000019531	ddb1	99	95.640	Cyprinodon_variegatus
ENSSFOG00015011151	ddb1	96	92.257	ENSDARG00000074431	ddb1	94	92.257	Danio_rerio
ENSSFOG00015011151	ddb1	97	91.814	ENSDNOG00000014884	DDB1	97	91.814	Dasypus_novemcinctus
ENSSFOG00015011151	ddb1	80	94.545	ENSDORG00000000127	Ddb1	93	94.545	Dipodomys_ordii
ENSSFOG00015011151	ddb1	97	61.240	FBgn0260962	pic	94	61.240	Drosophila_melanogaster
ENSSFOG00015011151	ddb1	66	94.488	ENSETEG00000001053	-	64	94.488	Echinops_telfairi
ENSSFOG00015011151	ddb1	80	84.139	ENSEBUG00000014593	ddb1	97	84.139	Eptatretus_burgeri
ENSSFOG00015011151	ddb1	97	91.450	ENSEASG00005008184	DDB1	94	91.450	Equus_asinus_asinus
ENSSFOG00015011151	ddb1	97	91.543	ENSECAG00000012136	DDB1	94	91.543	Equus_caballus
ENSSFOG00015011151	ddb1	87	87.710	ENSEEUG00000003194	DDB1	85	87.710	Erinaceus_europaeus
ENSSFOG00015011151	ddb1	97	96.000	ENSELUG00000023868	ddb1	94	96.000	Esox_lucius
ENSSFOG00015011151	ddb1	97	91.450	ENSFCAG00000029716	DDB1	94	91.450	Felis_catus
ENSSFOG00015011151	ddb1	98	90.037	ENSFALG00000011981	DDB1	95	90.037	Ficedula_albicollis
ENSSFOG00015011151	ddb1	97	91.357	ENSFDAG00000005128	DDB1	94	91.357	Fukomys_damarensis
ENSSFOG00015011151	ddb1	86	97.283	ENSFHEG00000022133	ddb1	93	97.283	Fundulus_heteroclitus
ENSSFOG00015011151	ddb1	81	97.993	ENSGMOG00000019386	ddb1	94	97.993	Gadus_morhua
ENSSFOG00015011151	ddb1	97	91.171	ENSGALG00000042333	DDB1	94	91.171	Gallus_gallus
ENSSFOG00015011151	ddb1	97	95.826	ENSGAFG00000013142	ddb1	99	95.826	Gambusia_affinis
ENSSFOG00015011151	ddb1	96	96.262	ENSGACG00000017182	ddb1	98	96.262	Gasterosteus_aculeatus
ENSSFOG00015011151	ddb1	92	90.980	ENSGAGG00000014124	DDB1	94	90.980	Gopherus_agassizii
ENSSFOG00015011151	ddb1	97	91.357	ENSGGOG00000004052	DDB1	94	91.357	Gorilla_gorilla
ENSSFOG00015011151	ddb1	97	96.190	ENSHBUG00000008873	ddb1	94	96.190	Haplochromis_burtoni
ENSSFOG00015011151	ddb1	97	91.171	ENSHGLG00000018430	DDB1	94	91.171	Heterocephalus_glaber_female
ENSSFOG00015011151	ddb1	97	90.149	ENSHGLG00100014475	DDB1	94	90.149	Heterocephalus_glaber_male
ENSSFOG00015011151	ddb1	97	96.097	ENSHCOG00000018670	ddb1	98	96.097	Hippocampus_comes
ENSSFOG00015011151	ddb1	97	95.531	ENSIPUG00000005612	DDB1	98	95.531	Ictalurus_punctatus
ENSSFOG00015011151	ddb1	97	91.357	ENSSTOG00000007552	DDB1	94	91.357	Ictidomys_tridecemlineatus
ENSSFOG00015011151	ddb1	97	91.357	ENSJJAG00000017769	Ddb1	94	91.357	Jaculus_jaculus
ENSSFOG00015011151	ddb1	97	95.810	ENSKMAG00000002315	ddb1	99	95.810	Kryptolebias_marmoratus
ENSSFOG00015011151	ddb1	86	96.462	ENSLBEG00000017065	ddb1	99	96.462	Labrus_bergylta
ENSSFOG00015011151	ddb1	96	91.799	ENSLACG00000017611	DDB1	97	91.651	Latimeria_chalumnae
ENSSFOG00015011151	ddb1	89	86.891	ENSLOCG00000000012	ddb1	94	86.891	Lepisosteus_oculatus
ENSSFOG00015011151	ddb1	97	91.264	ENSLAFG00000011513	DDB1	94	91.264	Loxodonta_africana
ENSSFOG00015011151	ddb1	97	91.357	ENSMFAG00000042035	DDB1	94	91.357	Macaca_fascicularis
ENSSFOG00015011151	ddb1	97	91.357	ENSMMUG00000002691	DDB1	100	95.775	Macaca_mulatta
ENSSFOG00015011151	ddb1	97	91.357	ENSMNEG00000031559	DDB1	94	91.357	Macaca_nemestrina
ENSSFOG00015011151	ddb1	97	91.357	ENSMLEG00000044136	DDB1	98	90.156	Mandrillus_leucophaeus
ENSSFOG00015011151	ddb1	97	96.654	ENSMAMG00000014372	ddb1	94	96.654	Mastacembelus_armatus
ENSSFOG00015011151	ddb1	97	96.097	ENSMZEG00005013835	ddb1	94	96.097	Maylandia_zebra
ENSSFOG00015011151	ddb1	92	89.463	ENSMGAG00000004990	DDB1	95	89.463	Meleagris_gallopavo
ENSSFOG00015011151	ddb1	97	91.450	ENSMAUG00000012926	Ddb1	94	91.450	Mesocricetus_auratus
ENSSFOG00015011151	ddb1	97	91.543	ENSMICG00000013703	DDB1	94	91.543	Microcebus_murinus
ENSSFOG00015011151	ddb1	97	91.450	ENSMOCG00000020499	Ddb1	94	91.450	Microtus_ochrogaster
ENSSFOG00015011151	ddb1	88	96.531	ENSMMOG00000001758	ddb1	99	96.531	Mola_mola
ENSSFOG00015011151	ddb1	97	83.658	ENSMODG00000020353	DDB1	93	83.658	Monodelphis_domestica
ENSSFOG00015011151	ddb1	97	96.744	ENSMALG00000014071	ddb1	94	96.744	Monopterus_albus
ENSSFOG00015011151	ddb1	97	91.450	MGP_CAROLIEiJ_G0022695	Ddb1	94	91.450	Mus_caroli
ENSSFOG00015011151	ddb1	97	91.543	ENSMUSG00000024740	Ddb1	94	91.543	Mus_musculus
ENSSFOG00015011151	ddb1	97	91.450	MGP_PahariEiJ_G0014189	Ddb1	94	91.450	Mus_pahari
ENSSFOG00015011151	ddb1	97	91.543	MGP_SPRETEiJ_G0023609	Ddb1	94	91.543	Mus_spretus
ENSSFOG00015011151	ddb1	97	88.290	ENSMPUG00000014200	DDB1	94	88.290	Mustela_putorius_furo
ENSSFOG00015011151	ddb1	97	91.450	ENSMLUG00000013232	DDB1	94	91.450	Myotis_lucifugus
ENSSFOG00015011151	ddb1	97	91.543	ENSNGAG00000009384	Ddb1	94	91.543	Nannospalax_galili
ENSSFOG00015011151	ddb1	97	96.283	ENSNBRG00000019581	ddb1	94	96.283	Neolamprologus_brichardi
ENSSFOG00015011151	ddb1	96	89.084	ENSNLEG00000002022	DDB1	94	89.084	Nomascus_leucogenys
ENSSFOG00015011151	ddb1	86	94.545	ENSMEUG00000001099	DDB1	87	94.545	Notamacropus_eugenii
ENSSFOG00015011151	ddb1	87	82.523	ENSOPRG00000008254	DDB1	85	82.523	Ochotona_princeps
ENSSFOG00015011151	ddb1	97	91.357	ENSODEG00000002419	DDB1	94	91.357	Octodon_degus
ENSSFOG00015011151	ddb1	97	96.097	ENSONIG00000005804	ddb1	94	96.097	Oreochromis_niloticus
ENSSFOG00015011151	ddb1	87	91.012	ENSOANG00000004897	DDB1	94	91.012	Ornithorhynchus_anatinus
ENSSFOG00015011151	ddb1	97	91.450	ENSOCUG00000001667	DDB1	94	91.450	Oryctolagus_cuniculus
ENSSFOG00015011151	ddb1	97	95.814	ENSORLG00000001399	ddb1	98	95.581	Oryzias_latipes
ENSSFOG00015011151	ddb1	97	95.721	ENSORLG00020001277	ddb1	96	95.721	Oryzias_latipes_hni
ENSSFOG00015011151	ddb1	97	95.814	ENSORLG00015002080	ddb1	99	95.814	Oryzias_latipes_hsok
ENSSFOG00015011151	ddb1	97	95.996	ENSOMEG00000006181	ddb1	97	95.996	Oryzias_melastigma
ENSSFOG00015011151	ddb1	97	91.543	ENSOGAG00000016103	DDB1	94	91.543	Otolemur_garnettii
ENSSFOG00015011151	ddb1	97	91.357	ENSOARG00000011716	DDB1	93	91.357	Ovis_aries
ENSSFOG00015011151	ddb1	97	91.357	ENSPPAG00000035343	DDB1	94	91.357	Pan_paniscus
ENSSFOG00015011151	ddb1	97	91.450	ENSPPRG00000013300	DDB1	94	91.450	Panthera_pardus
ENSSFOG00015011151	ddb1	95	91.469	ENSPTIG00000006909	DDB1	93	91.469	Panthera_tigris_altaica
ENSSFOG00015011151	ddb1	97	91.357	ENSPTRG00000003737	DDB1	94	91.357	Pan_troglodytes
ENSSFOG00015011151	ddb1	97	91.357	ENSPANG00000000242	DDB1	94	91.357	Papio_anubis
ENSSFOG00015011151	ddb1	97	97.874	ENSPKIG00000019213	ddb1	95	97.874	Paramormyrops_kingsleyae
ENSSFOG00015011151	ddb1	95	90.755	ENSPSIG00000013275	DDB1	94	90.755	Pelodiscus_sinensis
ENSSFOG00015011151	ddb1	88	96.327	ENSPMGG00000021179	ddb1	99	96.327	Periophthalmus_magnuspinnatus
ENSSFOG00015011151	ddb1	97	91.450	ENSPEMG00000012241	Ddb1	94	91.450	Peromyscus_maniculatus_bairdii
ENSSFOG00015011151	ddb1	92	86.935	ENSPMAG00000008479	ddb1	100	86.935	Petromyzon_marinus
ENSSFOG00015011151	ddb1	97	91.729	ENSPCIG00000002643	DDB1	94	91.729	Phascolarctos_cinereus
ENSSFOG00015011151	ddb1	96	96.078	ENSPFOG00000002768	ddb1	94	96.078	Poecilia_formosa
ENSSFOG00015011151	ddb1	97	96.093	ENSPLAG00000017227	ddb1	98	96.093	Poecilia_latipinna
ENSSFOG00015011151	ddb1	97	96.093	ENSPMEG00000011398	ddb1	98	96.093	Poecilia_mexicana
ENSSFOG00015011151	ddb1	97	96.093	ENSPREG00000004440	ddb1	98	96.093	Poecilia_reticulata
ENSSFOG00015011151	ddb1	97	87.268	ENSPPYG00000003193	DDB1	94	87.268	Pongo_abelii
ENSSFOG00015011151	ddb1	81	89.439	ENSPCAG00000011040	DDB1	79	89.439	Procavia_capensis
ENSSFOG00015011151	ddb1	97	91.179	ENSPCOG00000015176	DDB1	94	91.179	Propithecus_coquereli
ENSSFOG00015011151	ddb1	97	91.264	ENSPVAG00000003847	DDB1	94	91.264	Pteropus_vampyrus
ENSSFOG00015011151	ddb1	97	96.555	ENSPNAG00000006635	ddb1	97	96.555	Pygocentrus_nattereri
ENSSFOG00015011151	ddb1	97	91.543	ENSRNOG00000020715	Ddb1	94	91.543	Rattus_norvegicus
ENSSFOG00015011151	ddb1	97	91.357	ENSRBIG00000033611	DDB1	95	91.357	Rhinopithecus_bieti
ENSSFOG00015011151	ddb1	97	91.357	ENSRROG00000041407	DDB1	94	91.357	Rhinopithecus_roxellana
ENSSFOG00015011151	ddb1	97	91.450	ENSSBOG00000019775	DDB1	94	91.450	Saimiri_boliviensis_boliviensis
ENSSFOG00015011151	ddb1	90	89.066	ENSSHAG00000011600	DDB1	94	89.066	Sarcophilus_harrisii
ENSSFOG00015011151	ddb1	97	96.004	ENSSMAG00000009495	ddb1	94	96.004	Scophthalmus_maximus
ENSSFOG00015011151	ddb1	97	96.375	ENSSDUG00000004642	ddb1	94	96.375	Seriola_dumerili
ENSSFOG00015011151	ddb1	97	96.375	ENSSLDG00000015804	ddb1	94	96.375	Seriola_lalandi_dorsalis
ENSSFOG00015011151	ddb1	70	94.340	ENSSARG00000003290	-	71	94.340	Sorex_araneus
ENSSFOG00015011151	ddb1	97	91.357	ENSSPUG00000019338	DDB1	94	91.357	Sphenodon_punctatus
ENSSFOG00015011151	ddb1	97	96.837	ENSSPAG00000009888	ddb1	99	96.837	Stegastes_partitus
ENSSFOG00015011151	ddb1	96	91.207	ENSSSCG00000013094	DDB1	94	91.207	Sus_scrofa
ENSSFOG00015011151	ddb1	97	90.706	ENSTGUG00000006414	DDB1	94	90.706	Taeniopygia_guttata
ENSSFOG00015011151	ddb1	97	95.251	ENSTRUG00000016682	ddb1	99	95.251	Takifugu_rubripes
ENSSFOG00015011151	ddb1	84	89.446	ENSTNIG00000009565	ddb1	94	89.446	Tetraodon_nigroviridis
ENSSFOG00015011151	ddb1	89	85.470	ENSTTRG00000011055	DDB1	88	85.470	Tursiops_truncatus
ENSSFOG00015011151	ddb1	97	91.814	ENSUAMG00000017793	DDB1	93	91.814	Ursus_americanus
ENSSFOG00015011151	ddb1	97	91.814	ENSUMAG00000011788	DDB1	98	91.814	Ursus_maritimus
ENSSFOG00015011151	ddb1	86	86.891	ENSVPAG00000007963	DDB1	86	86.891	Vicugna_pacos
ENSSFOG00015011151	ddb1	97	91.450	ENSVVUG00000004987	DDB1	94	91.450	Vulpes_vulpes
ENSSFOG00015011151	ddb1	97	89.454	ENSXETG00000008820	ddb1	94	89.454	Xenopus_tropicalis
ENSSFOG00015011151	ddb1	88	95.714	ENSXCOG00000013956	ddb1	99	95.714	Xiphophorus_couchianus
ENSSFOG00015011151	ddb1	97	95.733	ENSXMAG00000000022	ddb1	99	95.733	Xiphophorus_maculatus