EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015011165 (Gene tree)
Gene ID: 108919520
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 3813 bases
Position: chrKV411272.1:2966199-2970011
Accession: 108919520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015017350	RRM_1	PF00076.22	1.7e-13	1	1
ENSSFOP00015017341	RRM_1	PF00076.22	5.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015017548	-	2327	XM_018727512	ENSSFOP00015017350	99 (aa)	XP_018583028	A0A1W4XTZ1
ENSSFOT00015017538	-	2429	-	ENSSFOP00015017341	133 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015011165's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015011165's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015011165	slirp	84	34.568	ENSSFOG00015005913	hnrnpd	53	34.568
ENSSFOG00015011165	slirp	71	30.769	ENSSFOG00015015634	hnrnpaba	54	30.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015011165	slirp	88	54.023	ENSG00000119705	SLIRP	93	63.380	Homo_sapiens
ENSSFOG00015011165	slirp	98	64.286	ENSAPOG00000001298	slirp	98	64.286	Acanthochromis_polyacanthus
ENSSFOG00015011165	slirp	71	61.429	ENSAMEG00000003975	SLIRP	77	61.429	Ailuropoda_melanoleuca
ENSSFOG00015011165	slirp	86	65.882	ENSACIG00000023083	slirp	84	65.882	Amphilophus_citrinellus
ENSSFOG00015011165	slirp	96	67.708	ENSAOCG00000006342	slirp	97	67.708	Amphiprion_ocellaris
ENSSFOG00015011165	slirp	96	67.708	ENSAPEG00000015917	slirp	97	67.708	Amphiprion_percula
ENSSFOG00015011165	slirp	96	67.708	ENSAPEG00000015719	-	98	67.708	Amphiprion_percula
ENSSFOG00015011165	slirp	94	68.817	ENSATEG00000013525	slirp	89	68.817	Anabas_testudineus
ENSSFOG00015011165	slirp	99	59.596	ENSAMXG00000018693	slirp	99	59.596	Astyanax_mexicanus
ENSSFOG00015011165	slirp	80	55.696	ENSCJAG00000016946	SLIRP	72	62.687	Callithrix_jacchus
ENSSFOG00015011165	slirp	78	59.740	ENSCAFG00020015876	-	69	59.740	Canis_lupus_dingo
ENSSFOG00015011165	slirp	88	56.322	ENSCCAG00000030130	SLIRP	78	56.322	Cebus_capucinus
ENSSFOG00015011165	slirp	88	54.023	ENSCATG00000036327	SLIRP	78	54.023	Cercocebus_atys
ENSSFOG00015011165	slirp	78	55.844	ENSCSAG00000011736	SLIRP	71	55.844	Chlorocebus_sabaeus
ENSSFOG00015011165	slirp	82	56.790	ENSCPBG00000026327	SLIRP	80	59.494	Chrysemys_picta_bellii
ENSSFOG00015011165	slirp	68	61.194	ENSCANG00000032892	SLIRP	68	61.194	Colobus_angolensis_palliatus
ENSSFOG00015011165	slirp	99	49.495	ENSCGRG00001024068	Slirp	89	49.495	Cricetulus_griseus_chok1gshd
ENSSFOG00015011165	slirp	99	49.495	ENSCGRG00000017440	Slirp	89	49.495	Cricetulus_griseus_crigri
ENSSFOG00015011165	slirp	85	67.857	ENSCSEG00000015766	slirp	86	67.857	Cynoglossus_semilaevis
ENSSFOG00015011165	slirp	81	68.750	ENSCVAG00000012504	slirp	79	68.750	Cyprinodon_variegatus
ENSSFOG00015011165	slirp	95	62.766	ENSDARG00000097753	slirp	94	62.887	Danio_rerio
ENSSFOG00015011165	slirp	88	51.724	ENSDNOG00000007721	SLIRP	79	51.724	Dasypus_novemcinctus
ENSSFOG00015011165	slirp	71	65.714	ENSDORG00000012379	Slirp	63	65.714	Dipodomys_ordii
ENSSFOG00015011165	slirp	71	61.429	ENSETEG00000010345	SLIRP	71	55.556	Echinops_telfairi
ENSSFOG00015011165	slirp	78	61.039	ENSEASG00005020193	SLIRP	69	61.039	Equus_asinus_asinus
ENSSFOG00015011165	slirp	71	57.143	ENSEEUG00000007257	SLIRP	69	57.143	Erinaceus_europaeus
ENSSFOG00015011165	slirp	99	59.596	ENSELUG00000016800	slirp	98	59.596	Esox_lucius
ENSSFOG00015011165	slirp	68	67.164	ENSFCAG00000036326	SLIRP	68	67.164	Felis_catus
ENSSFOG00015011165	slirp	78	57.143	ENSFALG00000012583	SLIRP	82	52.222	Ficedula_albicollis
ENSSFOG00015011165	slirp	71	62.857	ENSFDAG00000008347	SLIRP	62	62.857	Fukomys_damarensis
ENSSFOG00015011165	slirp	68	67.164	ENSFHEG00000004709	slirp	73	67.164	Fundulus_heteroclitus
ENSSFOG00015011165	slirp	85	61.905	ENSGMOG00000016948	slirp	81	61.905	Gadus_morhua
ENSSFOG00015011165	slirp	78	57.143	ENSGALG00000031238	SLIRP	87	54.217	Gallus_gallus
ENSSFOG00015011165	slirp	88	67.816	ENSGAFG00000010998	slirp	87	67.816	Gambusia_affinis
ENSSFOG00015011165	slirp	82	65.432	ENSGACG00000020137	slirp	92	68.354	Gasterosteus_aculeatus
ENSSFOG00015011165	slirp	84	65.060	ENSGAGG00000009953	SLIRP	63	60.000	Gopherus_agassizii
ENSSFOG00015011165	slirp	88	54.023	ENSGGOG00000011059	-	91	51.515	Gorilla_gorilla
ENSSFOG00015011165	slirp	85	53.571	ENSHGLG00000018491	SLIRP	74	53.571	Heterocephalus_glaber_female
ENSSFOG00015011165	slirp	85	53.571	ENSHGLG00100014153	SLIRP	74	53.571	Heterocephalus_glaber_male
ENSSFOG00015011165	slirp	98	61.856	ENSHCOG00000006795	slirp	98	61.856	Hippocampus_comes
ENSSFOG00015011165	slirp	100	63.000	ENSIPUG00000010214	SLIRP	100	63.000	Ictalurus_punctatus
ENSSFOG00015011165	slirp	71	61.429	ENSSTOG00000034316	SLIRP	61	64.706	Ictidomys_tridecemlineatus
ENSSFOG00015011165	slirp	85	61.905	ENSKMAG00000002038	slirp	90	53.061	Kryptolebias_marmoratus
ENSSFOG00015011165	slirp	99	59.184	ENSLBEG00000007564	slirp	98	59.184	Labrus_bergylta
ENSSFOG00015011165	slirp	99	60.606	ENSLACG00000013434	SLIRP	95	60.606	Latimeria_chalumnae
ENSSFOG00015011165	slirp	78	55.844	ENSMFAG00000042960	SLIRP	72	59.701	Macaca_fascicularis
ENSSFOG00015011165	slirp	77	56.579	ENSMMUG00000029256	SLIRP	72	59.701	Macaca_mulatta
ENSSFOG00015011165	slirp	78	55.844	ENSMNEG00000028921	SLIRP	72	59.701	Macaca_nemestrina
ENSSFOG00015011165	slirp	76	54.667	ENSMLEG00000043644	SLIRP	68	59.701	Mandrillus_leucophaeus
ENSSFOG00015011165	slirp	96	63.542	ENSMZEG00005004617	slirp	97	63.542	Maylandia_zebra
ENSSFOG00015011165	slirp	89	52.273	ENSMAUG00000003857	Slirp	76	52.273	Mesocricetus_auratus
ENSSFOG00015011165	slirp	77	61.842	ENSMICG00000012080	SLIRP	64	67.647	Microcebus_murinus
ENSSFOG00015011165	slirp	88	54.023	ENSMOCG00000016019	Slirp	78	54.023	Microtus_ochrogaster
ENSSFOG00015011165	slirp	98	64.286	ENSMMOG00000018268	slirp	98	64.286	Mola_mola
ENSSFOG00015011165	slirp	70	59.420	ENSMODG00000005207	-	97	60.870	Monodelphis_domestica
ENSSFOG00015011165	slirp	86	62.353	ENSMALG00000012581	slirp	87	62.353	Monopterus_albus
ENSSFOG00015011165	slirp	71	61.429	MGP_CAROLIEiJ_G0017995	Slirp	65	61.429	Mus_caroli
ENSSFOG00015011165	slirp	71	61.429	ENSMUSG00000021040	Slirp	69	63.235	Mus_musculus
ENSSFOG00015011165	slirp	71	61.429	MGP_SPRETEiJ_G0018840	Slirp	63	61.429	Mus_spretus
ENSSFOG00015011165	slirp	88	57.471	ENSMLUG00000029544	-	76	57.471	Myotis_lucifugus
ENSSFOG00015011165	slirp	87	56.977	ENSMLUG00000024998	-	86	54.639	Myotis_lucifugus
ENSSFOG00015011165	slirp	78	57.143	ENSNGAG00000016363	Slirp	74	57.143	Nannospalax_galili
ENSSFOG00015011165	slirp	72	57.746	ENSNLEG00000032459	-	73	57.353	Nomascus_leucogenys
ENSSFOG00015011165	slirp	72	57.746	ENSNLEG00000027238	-	83	55.556	Nomascus_leucogenys
ENSSFOG00015011165	slirp	72	59.155	ENSODEG00000012580	SLIRP	77	59.155	Octodon_degus
ENSSFOG00015011165	slirp	84	68.675	ENSONIG00000011692	slirp	84	68.675	Oreochromis_niloticus
ENSSFOG00015011165	slirp	76	64.000	ENSOANG00000022366	SLIRP	68	64.000	Ornithorhynchus_anatinus
ENSSFOG00015011165	slirp	98	63.265	ENSORLG00000010761	slirp	76	63.265	Oryzias_latipes
ENSSFOG00015011165	slirp	98	62.245	ENSORLG00020022188	slirp	98	62.245	Oryzias_latipes_hni
ENSSFOG00015011165	slirp	97	62.887	ENSORLG00015020171	slirp	96	62.887	Oryzias_latipes_hsok
ENSSFOG00015011165	slirp	98	62.245	ENSOMEG00000019321	slirp	98	62.245	Oryzias_melastigma
ENSSFOG00015011165	slirp	88	54.023	ENSPPAG00000040710	-	91	51.515	Pan_paniscus
ENSSFOG00015011165	slirp	68	67.164	ENSPPRG00000014350	SLIRP	68	67.164	Panthera_pardus
ENSSFOG00015011165	slirp	68	67.164	ENSPTIG00000014196	SLIRP	68	67.164	Panthera_tigris_altaica
ENSSFOG00015011165	slirp	80	58.228	ENSPTRG00000030691	SLIRP	81	60.759	Pan_troglodytes
ENSSFOG00015011165	slirp	88	55.172	ENSPANG00000026323	SLIRP	72	61.194	Papio_anubis
ENSSFOG00015011165	slirp	80	69.620	ENSPKIG00000008831	slirp	78	69.620	Paramormyrops_kingsleyae
ENSSFOG00015011165	slirp	80	70.886	ENSPMGG00000010541	slirp	93	71.605	Periophthalmus_magnuspinnatus
ENSSFOG00015011165	slirp	89	51.136	ENSPEMG00000013234	Slirp	87	49.438	Peromyscus_maniculatus_bairdii
ENSSFOG00015011165	slirp	86	48.235	ENSPMAG00000009355	slirp	94	48.235	Petromyzon_marinus
ENSSFOG00015011165	slirp	79	55.128	ENSPCIG00000026842	-	84	56.410	Phascolarctos_cinereus
ENSSFOG00015011165	slirp	88	68.966	ENSPFOG00000006758	slirp	87	68.966	Poecilia_formosa
ENSSFOG00015011165	slirp	88	68.966	ENSPLAG00000011140	slirp	87	68.966	Poecilia_latipinna
ENSSFOG00015011165	slirp	88	68.966	ENSPMEG00000019535	slirp	87	68.966	Poecilia_mexicana
ENSSFOG00015011165	slirp	88	68.966	ENSPREG00000011673	slirp	87	68.966	Poecilia_reticulata
ENSSFOG00015011165	slirp	88	56.322	ENSPPYG00000006030	SLIRP	65	66.197	Pongo_abelii
ENSSFOG00015011165	slirp	77	59.211	ENSPCOG00000015159	SLIRP	64	64.706	Propithecus_coquereli
ENSSFOG00015011165	slirp	100	69.697	ENSPNAG00000008633	slirp	100	69.697	Pygocentrus_nattereri
ENSSFOG00015011165	slirp	66	61.538	ENSRBIG00000031396	-	65	61.538	Rhinopithecus_bieti
ENSSFOG00015011165	slirp	68	59.701	ENSRBIG00000032998	-	62	59.701	Rhinopithecus_bieti
ENSSFOG00015011165	slirp	78	55.844	ENSRBIG00000032222	-	72	61.194	Rhinopithecus_bieti
ENSSFOG00015011165	slirp	78	51.948	ENSRBIG00000035817	-	71	51.948	Rhinopithecus_bieti
ENSSFOG00015011165	slirp	66	61.538	ENSRROG00000035604	-	65	61.538	Rhinopithecus_roxellana
ENSSFOG00015011165	slirp	71	60.000	ENSRROG00000041312	-	75	59.211	Rhinopithecus_roxellana
ENSSFOG00015011165	slirp	78	55.844	ENSRROG00000036656	-	72	61.194	Rhinopithecus_roxellana
ENSSFOG00015011165	slirp	68	61.194	ENSRROG00000017133	-	75	59.722	Rhinopithecus_roxellana
ENSSFOG00015011165	slirp	76	60.000	ENSSBOG00000020014	SLIRP	72	65.672	Saimiri_boliviensis_boliviensis
ENSSFOG00015011165	slirp	82	54.321	ENSSMAG00000012930	slirp	77	56.962	Scophthalmus_maximus
ENSSFOG00015011165	slirp	86	68.235	ENSSDUG00000021883	slirp	56	68.235	Seriola_dumerili
ENSSFOG00015011165	slirp	86	68.235	ENSSLDG00000023136	slirp	77	68.235	Seriola_lalandi_dorsalis
ENSSFOG00015011165	slirp	82	58.824	ENSSPUG00000009346	SLIRP	87	58.824	Sphenodon_punctatus
ENSSFOG00015011165	slirp	98	60.204	ENSSPAG00000013477	slirp	98	60.204	Stegastes_partitus
ENSSFOG00015011165	slirp	75	62.162	ENSSSCG00000028167	SLIRP	67	62.162	Sus_scrofa
ENSSFOG00015011165	slirp	78	54.545	ENSTGUG00000012337	SLIRP	87	48.421	Taeniopygia_guttata
ENSSFOG00015011165	slirp	99	56.566	ENSTRUG00000020127	slirp	98	56.566	Takifugu_rubripes
ENSSFOG00015011165	slirp	71	65.714	ENSUAMG00000022445	SLIRP	63	65.714	Ursus_americanus
ENSSFOG00015011165	slirp	78	61.039	ENSUMAG00000007166	SLIRP	69	61.039	Ursus_maritimus
ENSSFOG00015011165	slirp	88	56.818	ENSVPAG00000001781	SLIRP	78	56.818	Vicugna_pacos
ENSSFOG00015011165	slirp	71	62.857	ENSVVUG00000004436	SLIRP	63	62.857	Vulpes_vulpes
ENSSFOG00015011165	slirp	82	62.963	ENSXETG00000030343	SLIRP	91	62.963	Xenopus_tropicalis
ENSSFOG00015011165	slirp	88	66.667	ENSXCOG00000009422	slirp	87	66.667	Xiphophorus_couchianus
ENSSFOG00015011165	slirp	88	67.816	ENSXMAG00000015655	slirp	87	67.816	Xiphophorus_maculatus