EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015011219 (Gene tree)
Gene ID: 108928361
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 18678 bases
Position: chrKV410887.1:684029-702706
Accession: 108928361
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015017505	R3H	PF01424.22	6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015017705	-	2760	XM_018742256	ENSSFOP00015017505	919 (aa)	XP_018597772	-

Gene Model

Click here to download ENSSFOG00015011219's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015011219's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015011219	r3hdm2	58	46.182	ENSSFOG00015014134	r3hdm1	79	66.768
ENSSFOG00015011219	r3hdm2	91	58.424	ENSSFOG00015019851	-	81	61.976

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015011219	r3hdm2	99	69.401	ENSG00000179912	R3HDM2	98	70.234	Homo_sapiens
ENSSFOG00015011219	r3hdm2	99	79.692	ENSAPOG00000020341	r3hdm2	94	80.718	Acanthochromis_polyacanthus
ENSSFOG00015011219	r3hdm2	99	66.070	ENSAMEG00000004812	R3HDM2	94	67.269	Ailuropoda_melanoleuca
ENSSFOG00015011219	r3hdm2	99	78.373	ENSACIG00000016146	r3hdm2	98	71.561	Amphilophus_citrinellus
ENSSFOG00015011219	r3hdm2	99	78.248	ENSAOCG00000023694	r3hdm2	95	79.154	Amphiprion_ocellaris
ENSSFOG00015011219	r3hdm2	99	80.130	ENSAPEG00000008851	r3hdm2	100	80.886	Amphiprion_percula
ENSSFOG00015011219	r3hdm2	99	80.842	ENSATEG00000025024	r3hdm2	94	79.980	Anabas_testudineus
ENSSFOG00015011219	r3hdm2	99	77.907	ENSAPLG00000004298	R3HDM2	85	77.907	Anas_platyrhynchos
ENSSFOG00015011219	r3hdm2	99	66.084	ENSACAG00000006388	R3HDM2	94	66.735	Anolis_carolinensis
ENSSFOG00015011219	r3hdm2	99	68.828	ENSANAG00000025397	-	94	70.488	Aotus_nancymaae
ENSSFOG00015011219	r3hdm2	99	66.421	ENSANAG00000031310	-	96	68.090	Aotus_nancymaae
ENSSFOG00015011219	r3hdm2	99	77.117	ENSACLG00000019106	r3hdm2	95	78.226	Astatotilapia_calliptera
ENSSFOG00015011219	r3hdm2	99	69.415	ENSBTAG00000018361	R3HDM2	94	71.338	Bos_taurus
ENSSFOG00015011219	r3hdm2	99	68.998	ENSCJAG00000007365	R3HDM2	94	70.551	Callithrix_jacchus
ENSSFOG00015011219	r3hdm2	99	69.351	ENSCAFG00000000215	R3HDM2	94	71.005	Canis_familiaris
ENSSFOG00015011219	r3hdm2	99	69.958	ENSCAFG00020023713	R3HDM2	94	71.626	Canis_lupus_dingo
ENSSFOG00015011219	r3hdm2	99	69.833	ENSCHIG00000014022	R3HDM2	94	71.762	Capra_hircus
ENSSFOG00015011219	r3hdm2	99	69.424	ENSTSYG00000001449	R3HDM2	94	70.930	Carlito_syrichta
ENSSFOG00015011219	r3hdm2	99	69.223	ENSCPOG00000009217	R3HDM2	94	70.064	Cavia_porcellus
ENSSFOG00015011219	r3hdm2	88	69.240	ENSCCAG00000026083	R3HDM2	93	71.014	Cebus_capucinus
ENSSFOG00015011219	r3hdm2	99	69.085	ENSCATG00000036929	R3HDM2	94	70.382	Cercocebus_atys
ENSSFOG00015011219	r3hdm2	99	68.980	ENSCLAG00000011997	R3HDM2	94	70.053	Chinchilla_lanigera
ENSSFOG00015011219	r3hdm2	99	66.937	ENSCSAG00000004911	R3HDM2	94	67.930	Chlorocebus_sabaeus
ENSSFOG00015011219	r3hdm2	69	72.800	ENSCHOG00000005636	R3HDM2	80	70.146	Choloepus_hoffmanni
ENSSFOG00015011219	r3hdm2	99	66.395	ENSCPBG00000013922	R3HDM2	94	66.497	Chrysemys_picta_bellii
ENSSFOG00015011219	r3hdm2	99	68.619	ENSCANG00000043807	R3HDM2	94	70.170	Colobus_angolensis_palliatus
ENSSFOG00015011219	r3hdm2	99	68.559	ENSCGRG00001017324	R3hdm2	94	69.862	Cricetulus_griseus_chok1gshd
ENSSFOG00015011219	r3hdm2	99	66.631	ENSCGRG00000003862	R3hdm2	94	67.839	Cricetulus_griseus_crigri
ENSSFOG00015011219	r3hdm2	99	76.683	ENSCSEG00000010925	r3hdm2	100	75.548	Cynoglossus_semilaevis
ENSSFOG00015011219	r3hdm2	99	76.008	ENSCVAG00000009058	r3hdm2	100	75.456	Cyprinodon_variegatus
ENSSFOG00015011219	r3hdm2	99	76.160	ENSDARG00000102610	r3hdm2	99	76.623	Danio_rerio
ENSSFOG00015011219	r3hdm2	99	66.937	ENSDNOG00000015033	R3HDM2	100	69.160	Dasypus_novemcinctus
ENSSFOG00015011219	r3hdm2	99	66.771	ENSDORG00000011462	R3hdm2	98	68.443	Dipodomys_ordii
ENSSFOG00015011219	r3hdm2	99	69.415	ENSEASG00005007091	R3HDM2	94	71.292	Equus_asinus_asinus
ENSSFOG00015011219	r3hdm2	99	69.311	ENSECAG00000003157	R3HDM2	94	71.019	Equus_caballus
ENSSFOG00015011219	r3hdm2	100	74.339	ENSELUG00000015969	r3hdm2	100	73.529	Esox_lucius
ENSSFOG00015011219	r3hdm2	99	68.383	ENSFCAG00000000192	R3HDM2	94	69.108	Felis_catus
ENSSFOG00015011219	r3hdm2	88	67.647	ENSFALG00000000255	R3HDM2	93	62.470	Ficedula_albicollis
ENSSFOG00015011219	r3hdm2	99	68.311	ENSFDAG00000019385	R3HDM2	94	69.767	Fukomys_damarensis
ENSSFOG00015011219	r3hdm2	99	77.618	ENSFHEG00000016484	r3hdm2	94	78.314	Fundulus_heteroclitus
ENSSFOG00015011219	r3hdm2	99	74.925	ENSGMOG00000007961	r3hdm2	99	74.625	Gadus_morhua
ENSSFOG00015011219	r3hdm2	99	67.431	ENSGALG00000043736	R3HDM2	94	65.473	Gallus_gallus
ENSSFOG00015011219	r3hdm2	99	75.653	ENSGAFG00000013887	r3hdm2	100	76.280	Gambusia_affinis
ENSSFOG00015011219	r3hdm2	99	75.322	ENSGACG00000006442	r3hdm2	99	76.412	Gasterosteus_aculeatus
ENSSFOG00015011219	r3hdm2	99	66.494	ENSGAGG00000017797	R3HDM2	94	66.701	Gopherus_agassizii
ENSSFOG00015011219	r3hdm2	99	69.295	ENSGGOG00000015007	R3HDM2	94	70.594	Gorilla_gorilla
ENSSFOG00015011219	r3hdm2	94	61.846	ENSHGLG00000010421	-	97	62.796	Heterocephalus_glaber_female
ENSSFOG00015011219	r3hdm2	99	66.702	ENSHGLG00000010434	-	94	67.831	Heterocephalus_glaber_female
ENSSFOG00015011219	r3hdm2	97	60.580	ENSHGLG00100018871	-	95	61.371	Heterocephalus_glaber_male
ENSSFOG00015011219	r3hdm2	99	68.619	ENSHGLG00100004183	-	94	69.758	Heterocephalus_glaber_male
ENSSFOG00015011219	r3hdm2	99	77.532	ENSHCOG00000001142	r3hdm2	91	79.114	Hippocampus_comes
ENSSFOG00015011219	r3hdm2	100	72.700	ENSIPUG00000023873	r3hdm2	94	73.404	Ictalurus_punctatus
ENSSFOG00015011219	r3hdm2	99	67.090	ENSSTOG00000013424	R3HDM2	94	68.376	Ictidomys_tridecemlineatus
ENSSFOG00015011219	r3hdm2	99	67.229	ENSJJAG00000010001	R3hdm2	94	67.449	Jaculus_jaculus
ENSSFOG00015011219	r3hdm2	99	79.958	ENSKMAG00000012695	r3hdm2	99	80.700	Kryptolebias_marmoratus
ENSSFOG00015011219	r3hdm2	99	64.436	ENSLACG00000019064	r3hdm2	99	64.214	Latimeria_chalumnae
ENSSFOG00015011219	r3hdm2	99	65.377	ENSLAFG00000006510	R3HDM2	94	66.767	Loxodonta_africana
ENSSFOG00015011219	r3hdm2	99	69.295	ENSMFAG00000036385	R3HDM2	94	70.594	Macaca_fascicularis
ENSSFOG00015011219	r3hdm2	99	69.295	ENSMMUG00000021789	R3HDM2	94	70.594	Macaca_mulatta
ENSSFOG00015011219	r3hdm2	99	68.828	ENSMNEG00000025314	R3HDM2	94	70.488	Macaca_nemestrina
ENSSFOG00015011219	r3hdm2	99	69.190	ENSMLEG00000028915	R3HDM2	94	70.488	Mandrillus_leucophaeus
ENSSFOG00015011219	r3hdm2	99	77.117	ENSMZEG00005007319	r3hdm2	95	78.226	Maylandia_zebra
ENSSFOG00015011219	r3hdm2	99	70.042	ENSMICG00000012389	R3HDM2	94	71.323	Microcebus_murinus
ENSSFOG00015011219	r3hdm2	99	69.093	ENSMOCG00000014425	R3hdm2	94	69.745	Microtus_ochrogaster
ENSSFOG00015011219	r3hdm2	99	78.275	ENSMMOG00000007448	r3hdm2	99	78.914	Mola_mola
ENSSFOG00015011219	r3hdm2	99	69.247	MGP_CAROLIEiJ_G0015896	R3hdm2	94	69.353	Mus_caroli
ENSSFOG00015011219	r3hdm2	99	69.561	ENSMUSG00000025404	R3hdm2	94	69.671	Mus_musculus
ENSSFOG00015011219	r3hdm2	99	68.868	MGP_PahariEiJ_G0031189	R3hdm2	94	69.321	Mus_pahari
ENSSFOG00015011219	r3hdm2	99	69.561	MGP_SPRETEiJ_G0016722	R3hdm2	94	69.671	Mus_spretus
ENSSFOG00015011219	r3hdm2	97	65.005	ENSMPUG00000001818	R3HDM2	91	66.564	Mustela_putorius_furo
ENSSFOG00015011219	r3hdm2	99	66.901	ENSMLUG00000004980	R3HDM2	94	66.901	Myotis_lucifugus
ENSSFOG00015011219	r3hdm2	99	68.717	ENSNGAG00000018800	R3hdm2	94	70.064	Nannospalax_galili
ENSSFOG00015011219	r3hdm2	99	78.579	ENSNBRG00000004483	r3hdm2	99	77.519	Neolamprologus_brichardi
ENSSFOG00015011219	r3hdm2	99	68.828	ENSNLEG00000017351	R3HDM2	94	70.488	Nomascus_leucogenys
ENSSFOG00015011219	r3hdm2	99	59.082	ENSMEUG00000008588	R3HDM2	94	59.740	Notamacropus_eugenii
ENSSFOG00015011219	r3hdm2	99	64.916	ENSOPRG00000013670	R3HDM2	94	65.605	Ochotona_princeps
ENSSFOG00015011219	r3hdm2	99	80.524	ENSONIG00000005075	r3hdm2	94	81.257	Oreochromis_niloticus
ENSSFOG00015011219	r3hdm2	99	65.941	ENSOCUG00000013258	R3HDM2	94	67.335	Oryctolagus_cuniculus
ENSSFOG00015011219	r3hdm2	99	78.292	ENSORLG00000005502	r3hdm2	94	76.948	Oryzias_latipes
ENSSFOG00015011219	r3hdm2	99	76.768	ENSORLG00020017069	r3hdm2	94	77.350	Oryzias_latipes_hni
ENSSFOG00015011219	r3hdm2	99	76.869	ENSORLG00015012735	r3hdm2	94	77.374	Oryzias_latipes_hsok
ENSSFOG00015011219	r3hdm2	99	75.053	ENSOMEG00000018079	r3hdm2	93	75.793	Oryzias_melastigma
ENSSFOG00015011219	r3hdm2	99	65.213	ENSOGAG00000012055	R3HDM2	94	66.770	Otolemur_garnettii
ENSSFOG00015011219	r3hdm2	96	63.008	ENSOGAG00000027966	-	93	63.193	Otolemur_garnettii
ENSSFOG00015011219	r3hdm2	99	69.511	ENSOARG00000006929	R3HDM2	94	71.323	Ovis_aries
ENSSFOG00015011219	r3hdm2	99	69.401	ENSPPAG00000034395	R3HDM2	94	70.701	Pan_paniscus
ENSSFOG00015011219	r3hdm2	99	69.360	ENSPPRG00000009240	R3HDM2	94	70.794	Panthera_pardus
ENSSFOG00015011219	r3hdm2	99	69.360	ENSPTIG00000008752	R3HDM2	94	70.794	Panthera_tigris_altaica
ENSSFOG00015011219	r3hdm2	99	69.506	ENSPTRG00000046457	R3HDM2	94	70.807	Pan_troglodytes
ENSSFOG00015011219	r3hdm2	99	69.190	ENSPANG00000024002	R3HDM2	96	70.488	Papio_anubis
ENSSFOG00015011219	r3hdm2	100	82.888	ENSPKIG00000003171	r3hdm2	96	78.860	Paramormyrops_kingsleyae
ENSSFOG00015011219	r3hdm2	61	61.644	ENSPSIG00000006954	R3HDM2	91	61.274	Pelodiscus_sinensis
ENSSFOG00015011219	r3hdm2	99	79.786	ENSPMGG00000007061	r3hdm2	99	78.846	Periophthalmus_magnuspinnatus
ENSSFOG00015011219	r3hdm2	99	67.887	ENSPEMG00000015964	R3hdm2	94	69.436	Peromyscus_maniculatus_bairdii
ENSSFOG00015011219	r3hdm2	99	68.743	ENSPCIG00000023841	R3HDM2	94	69.936	Phascolarctos_cinereus
ENSSFOG00015011219	r3hdm2	99	83.621	ENSPFOG00000006077	r3hdm2	92	85.057	Poecilia_formosa
ENSSFOG00015011219	r3hdm2	99	78.131	ENSPLAG00000002971	r3hdm2	99	76.225	Poecilia_latipinna
ENSSFOG00015011219	r3hdm2	99	78.131	ENSPMEG00000005330	r3hdm2	99	76.225	Poecilia_mexicana
ENSSFOG00015011219	r3hdm2	99	77.721	ENSPREG00000008424	r3hdm2	100	73.827	Poecilia_reticulata
ENSSFOG00015011219	r3hdm2	97	64.865	ENSPPYG00000004685	R3HDM2	76	65.721	Pongo_abelii
ENSSFOG00015011219	r3hdm2	94	81.041	ENSPCAG00000014642	R3HDM2	89	86.939	Procavia_capensis
ENSSFOG00015011219	r3hdm2	99	69.570	ENSPCOG00000013201	R3HDM2	94	71.186	Propithecus_coquereli
ENSSFOG00015011219	r3hdm2	99	65.936	ENSPVAG00000003967	R3HDM2	94	66.700	Pteropus_vampyrus
ENSSFOG00015011219	r3hdm2	99	77.287	ENSPNYG00000013479	r3hdm2	100	77.392	Pundamilia_nyererei
ENSSFOG00015011219	r3hdm2	100	76.775	ENSPNAG00000017473	r3hdm2	94	74.827	Pygocentrus_nattereri
ENSSFOG00015011219	r3hdm2	99	67.812	ENSRNOG00000007801	R3hdm2	94	68.611	Rattus_norvegicus
ENSSFOG00015011219	r3hdm2	99	66.841	ENSRBIG00000037403	R3HDM2	94	68.471	Rhinopithecus_bieti
ENSSFOG00015011219	r3hdm2	99	68.724	ENSRROG00000022271	R3HDM2	94	70.382	Rhinopithecus_roxellana
ENSSFOG00015011219	r3hdm2	99	68.933	ENSSBOG00000023547	R3HDM2	94	70.488	Saimiri_boliviensis_boliviensis
ENSSFOG00015011219	r3hdm2	99	63.137	ENSSHAG00000003511	R3HDM2	93	70.602	Sarcophilus_harrisii
ENSSFOG00015011219	r3hdm2	99	78.306	ENSSMAG00000012073	r3hdm2	100	77.672	Scophthalmus_maximus
ENSSFOG00015011219	r3hdm2	99	79.321	ENSSDUG00000019269	r3hdm2	100	77.331	Seriola_dumerili
ENSSFOG00015011219	r3hdm2	99	78.441	ENSSLDG00000005252	r3hdm2	100	77.495	Seriola_lalandi_dorsalis
ENSSFOG00015011219	r3hdm2	93	63.375	ENSSARG00000003958	R3HDM2	88	63.620	Sorex_araneus
ENSSFOG00015011219	r3hdm2	99	63.489	ENSSPUG00000014132	R3HDM2	94	64.694	Sphenodon_punctatus
ENSSFOG00015011219	r3hdm2	99	79.590	ENSSPAG00000022594	r3hdm2	100	80.346	Stegastes_partitus
ENSSFOG00015011219	r3hdm2	99	69.102	ENSSSCG00000026498	R3HDM2	94	70.913	Sus_scrofa
ENSSFOG00015011219	r3hdm2	70	63.239	ENSTGUG00000015881	R3HDM2	92	63.508	Taeniopygia_guttata
ENSSFOG00015011219	r3hdm2	99	74.217	ENSTRUG00000015075	r3hdm2	50	79.661	Takifugu_rubripes
ENSSFOG00015011219	r3hdm2	95	85.879	ENSTNIG00000007057	r3hdm2	87	87.069	Tetraodon_nigroviridis
ENSSFOG00015011219	r3hdm2	77	68.551	ENSTBEG00000015967	R3HDM2	73	69.039	Tupaia_belangeri
ENSSFOG00015011219	r3hdm2	92	75.467	ENSTTRG00000013082	R3HDM2	79	71.602	Tursiops_truncatus
ENSSFOG00015011219	r3hdm2	99	69.684	ENSUAMG00000020913	R3HDM2	94	68.410	Ursus_americanus
ENSSFOG00015011219	r3hdm2	96	68.852	ENSUMAG00000019179	R3HDM2	93	70.199	Ursus_maritimus
ENSSFOG00015011219	r3hdm2	94	80.952	ENSVPAG00000008656	R3HDM2	87	81.295	Vicugna_pacos
ENSSFOG00015011219	r3hdm2	97	66.736	ENSVVUG00000018014	R3HDM2	90	68.349	Vulpes_vulpes
ENSSFOG00015011219	r3hdm2	99	64.076	ENSXETG00000017153	r3hdm2	94	63.694	Xenopus_tropicalis
ENSSFOG00015011219	r3hdm2	91	75.028	ENSXCOG00000013882	r3hdm2	100	75.339	Xiphophorus_couchianus
ENSSFOG00015011219	r3hdm2	99	76.536	ENSXMAG00000017978	r3hdm2	100	75.339	Xiphophorus_maculatus