EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSFOG00015011251 (Gene tree)
Gene ID
108934928
Gene Symbol
-
Alias
-
Full Name
pre-mRNA-splicing factor 38B-like
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Plus strand
Length
4891 bases
Position
chrKV411097.1:4025082-4029972
Accession
108934928
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015017506PRP38PF03371.152.8e-5711
ENSSFOP00015017517PRP38PF03371.151e-4811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015017717-3010-ENSSFOP00015017517192 (aa)--
ENSSFOT00015017706-2696XM_018753148ENSSFOP00015017506548 (aa)XP_018608664A0A0P7UMF5
Gene Model
Click here to download ENSSFOG00015011251's gene model file
Pathways
Pathway IDPathway NameSource
sfm03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015011251's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSFOG00015011251-5757.612ENSSFOG00015004383-9150.923
ENSSFOG00015011251-8782.036ENSSFOG00015004405-10078.421
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015011251-8885.207ENSACIG00000016459-9786.228Amphilophus_citrinellus
ENSSFOG00015011251-8191.667ENSATEG00000014482-9469.438Anabas_testudineus
ENSSFOG00015011251-7997.351ENSBTAG00000047874PRPF38B9462.791Bos_taurus
ENSSFOG00015011251-7657.534WBGene00022434Y108G3AL.26354.327Caenorhabditis_elegans
ENSSFOG00015011251-7095.522ENSCAFG00020010992-9453.819Canis_lupus_dingo
ENSSFOG00015011251-7997.351ENSCHIG00000024357-9462.791Capra_hircus
ENSSFOG00015011251-7997.351ENSCPOG00000039545-9462.186Cavia_porcellus
ENSSFOG00015011251-7997.351ENSCLAG00000005801-9461.279Chinchilla_lanigera
ENSSFOG00015011251-7997.351ENSCPBG00000028299-9362.050Chrysemys_picta_bellii
ENSSFOG00015011251-7674.483ENSCSAVG00000009443-7075.263Ciona_savignyi
ENSSFOG00015011251-8192.308ENSCSEG00000015030-8671.499Cynoglossus_semilaevis
ENSSFOG00015011251-9587.912ENSCVAG00000005543-8787.912Cyprinodon_variegatus
ENSSFOG00015011251-7774.830FBgn0030468CG16228975.316Drosophila_melanogaster
ENSSFOG00015011251-7695.862ENSETEG00000014690-9369.249Echinops_telfairi
ENSSFOG00015011251-8886.982ENSELUG00000010390-9065.618Esox_lucius
ENSSFOG00015011251-8291.083ENSGMOG00000012080-8767.711Gadus_morhua
ENSSFOG00015011251-8491.515ENSGALG00000001972-9362.612Gallus_gallus
ENSSFOG00015011251-8589.024ENSGAFG00000008943-9468.090Gambusia_affinis
ENSSFOG00015011251-7997.351ENSGAGG00000001563-9362.590Gopherus_agassizii
ENSSFOG00015011251-7997.351ENSHGLG00000016583PRPF38B9561.484Heterocephalus_glaber_female
ENSSFOG00015011251-7997.351ENSHGLG00100015525-9561.484Heterocephalus_glaber_male
ENSSFOG00015011251-8192.308ENSHCOG00000001071-8673.000Hippocampus_comes
ENSSFOG00015011251-8587.195ENSKMAG00000005540-9463.029Kryptolebias_marmoratus
ENSSFOG00015011251-8885.143ENSLACG00000015511-9758.421Latimeria_chalumnae
ENSSFOG00015011251-8095.425ENSMOCG00000020285-9162.431Microtus_ochrogaster
ENSSFOG00015011251-8589.024ENSMMOG00000011639-8773.529Mola_mola
ENSSFOG00015011251-7997.351ENSMODG00000002350-6696.569Monodelphis_domestica
ENSSFOG00015011251-8589.024ENSMALG00000019479-9469.213Monopterus_albus
ENSSFOG00015011251-8687.273ENSNBRG00000019221-9787.273Neolamprologus_brichardi
ENSSFOG00015011251-8587.195ENSONIG00000010129-9569.888Oreochromis_niloticus
ENSSFOG00015011251-8887.079ENSOANG00000007343-5488.745Ornithorhynchus_anatinus
ENSSFOG00015011251-9087.283ENSORLG00000015621-9987.283Oryzias_latipes
ENSSFOG00015011251-9087.283ENSORLG00020016276-9987.283Oryzias_latipes_hni
ENSSFOG00015011251-9586.813ENSORLG00015016270-8886.813Oryzias_latipes_hsok
ENSSFOG00015011251-9586.813ENSOMEG00000022050-9886.813Oryzias_melastigma
ENSSFOG00015011251-7997.351ENSOGAG00000027048-9461.989Otolemur_garnettii
ENSSFOG00015011251-7498.592ENSOARG00000018899-9462.162Ovis_aries
ENSSFOG00015011251-8093.506ENSPKIG00000004815-9562.243Paramormyrops_kingsleyae
ENSSFOG00015011251-8692.771ENSPKIG00000017291-9970.545Paramormyrops_kingsleyae
ENSSFOG00015011251-7997.351ENSPSIG00000016569-9263.091Pelodiscus_sinensis
ENSSFOG00015011251-8389.937ENSPMGG00000017585-9889.937Periophthalmus_magnuspinnatus
ENSSFOG00015011251-7779.054ENSPMAG00000007150-9379.054Petromyzon_marinus
ENSSFOG00015011251-9686.486ENSPFOG00000004025-9786.486Poecilia_formosa
ENSSFOG00015011251-8589.024ENSPLAG00000019842-9468.539Poecilia_latipinna
ENSSFOG00015011251-8589.024ENSPMEG00000004807-9268.539Poecilia_mexicana
ENSSFOG00015011251-9587.363ENSPREG00000015599-9887.363Poecilia_reticulata
ENSSFOG00015011251-8094.156ENSPNAG00000017484-9662.044Pygocentrus_nattereri
ENSSFOG00015011251-7997.351ENSRNOG00000020438Prpf38b9163.956Rattus_norvegicus
ENSSFOG00015011251-9685.870ENSSMAG00000001781-9985.870Scophthalmus_maximus
ENSSFOG00015011251-9686.413ENSSDUG00000016574-9986.413Seriola_dumerili
ENSSFOG00015011251-9686.413ENSSLDG00000023487-9986.413Seriola_lalandi_dorsalis
ENSSFOG00015011251-7994.737ENSSPUG00000017742-9360.862Sphenodon_punctatus
ENSSFOG00015011251-8489.441ENSTRUG00000011765-9470.222Takifugu_rubripes
ENSSFOG00015011251-8687.879ENSTNIG00000015299-5786.147Tetraodon_nigroviridis
ENSSFOG00015011251-7980.795ENSTBEG00000007504-9757.721Tupaia_belangeri
ENSSFOG00015011251-7997.351ENSTTRG00000006479-9462.612Tursiops_truncatus
ENSSFOG00015011251-7472.028ENSVPAG00000005541-9454.383Vicugna_pacos
ENSSFOG00015011251-8096.732ENSXETG00000005260prpf38b9958.602Xenopus_tropicalis
ENSSFOG00015011251-8589.024ENSXCOG00000008329-9467.865Xiphophorus_couchianus
ENSSFOG00015011251-8192.308ENSXMAG00000023831-9467.865Xiphophorus_maculatus

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