EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015011322 (Gene tree)
Gene ID: 108940475
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC108940475
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 10442 bases
Position: chrKV411212.1:7800307-7810748
Accession: 108940475
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015017608	Exo_endo_phos	PF03372.23	4.3e-13	1	1
ENSSFOP00015017632	Exo_endo_phos	PF03372.23	1.4e-06	1	1
ENSSFOP00015017643	Exo_endo_phos	PF03372.23	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015017832	-	3180	-	ENSSFOP00015017632	356 (aa)	-	-
ENSSFOT00015017807	-	4511	XM_018762686	ENSSFOP00015017608	734 (aa)	XP_018618202	A0A1W5AY69
ENSSFOT00015017843	-	3180	-	ENSSFOP00015017643	356 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015011322's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015011322's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015011322	-	71	53.175	ENSG00000111802	TDP2	84	52.756	Homo_sapiens
ENSSFOG00015011322	-	70	55.159	ENSAPOG00000018379	-	89	55.777	Acanthochromis_polyacanthus
ENSSFOG00015011322	-	71	52.381	ENSAMEG00000010230	TDP2	91	51.575	Ailuropoda_melanoleuca
ENSSFOG00015011322	-	76	51.460	ENSAPEG00000004208	-	98	53.571	Amphiprion_percula
ENSSFOG00015011322	-	70	51.765	ENSATEG00000010663	-	84	51.373	Anabas_testudineus
ENSSFOG00015011322	-	76	52.381	ENSACAG00000002332	TDP2	69	53.571	Anolis_carolinensis
ENSSFOG00015011322	-	71	52.778	ENSANAG00000020033	TDP2	70	52.778	Aotus_nancymaae
ENSSFOG00015011322	-	69	56.627	ENSACLG00000016148	tdp2b	92	56.400	Astatotilapia_calliptera
ENSSFOG00015011322	-	72	51.969	ENSACLG00000016174	tdp2b	92	51.969	Astatotilapia_calliptera
ENSSFOG00015011322	-	72	51.575	ENSACLG00000016132	tdp2b	92	51.575	Astatotilapia_calliptera
ENSSFOG00015011322	-	70	66.800	ENSAMXG00000036549	tdp2a	82	67.600	Astyanax_mexicanus
ENSSFOG00015011322	-	77	54.839	ENSAMXG00000011775	tdp2b	65	54.839	Astyanax_mexicanus
ENSSFOG00015011322	-	71	52.381	ENSBTAG00000000365	TDP2	69	52.381	Bos_taurus
ENSSFOG00015011322	-	69	31.746	WBGene00013405	tdpt-1	67	31.746	Caenorhabditis_elegans
ENSSFOG00015011322	-	71	52.778	ENSCJAG00000006074	TDP2	84	52.362	Callithrix_jacchus
ENSSFOG00015011322	-	71	51.984	ENSCJAG00000021963	-	70	52.381	Callithrix_jacchus
ENSSFOG00015011322	-	71	52.381	ENSCAFG00000010428	TDP2	87	52.381	Canis_familiaris
ENSSFOG00015011322	-	71	52.381	ENSCAFG00020009994	TDP2	87	52.381	Canis_lupus_dingo
ENSSFOG00015011322	-	72	51.575	ENSCHIG00000015294	-	94	51.575	Capra_hircus
ENSSFOG00015011322	-	71	51.181	ENSTSYG00000037199	TDP2	89	51.190	Carlito_syrichta
ENSSFOG00015011322	-	71	52.362	ENSCPOG00000006390	TDP2	71	52.362	Cavia_porcellus
ENSSFOG00015011322	-	71	52.381	ENSCCAG00000022734	TDP2	84	51.969	Cebus_capucinus
ENSSFOG00015011322	-	71	53.175	ENSCATG00000022076	TDP2	86	52.362	Cercocebus_atys
ENSSFOG00015011322	-	71	53.150	ENSCLAG00000002072	TDP2	71	53.150	Chinchilla_lanigera
ENSSFOG00015011322	-	71	53.175	ENSCSAG00000007769	TDP2	72	52.778	Chlorocebus_sabaeus
ENSSFOG00015011322	-	71	53.150	ENSCPBG00000006551	TDP2	65	53.150	Chrysemys_picta_bellii
ENSSFOG00015011322	-	71	53.175	ENSCANG00000040122	TDP2	86	52.756	Colobus_angolensis_palliatus
ENSSFOG00015011322	-	73	49.603	ENSCGRG00001000384	Tdp2	76	49.603	Cricetulus_griseus_chok1gshd
ENSSFOG00015011322	-	71	49.603	ENSCGRG00000010250	Tdp2	75	49.603	Cricetulus_griseus_crigri
ENSSFOG00015011322	-	71	54.724	ENSCVAG00000003114	tdp2b	70	54.724	Cyprinodon_variegatus
ENSSFOG00015011322	-	71	55.556	ENSDARG00000035954	tdp2b	66	55.691	Danio_rerio
ENSSFOG00015011322	-	69	65.992	ENSDARG00000069941	tdp2a	55	66.397	Danio_rerio
ENSSFOG00015011322	-	71	53.968	ENSDNOG00000044082	TDP2	69	53.968	Dasypus_novemcinctus
ENSSFOG00015011322	-	73	52.107	ENSETEG00000019096	TDP2	94	52.107	Echinops_telfairi
ENSSFOG00015011322	-	69	46.964	ENSEBUG00000006535	tdp2a	59	47.755	Eptatretus_burgeri
ENSSFOG00015011322	-	71	52.381	ENSEASG00005007656	TDP2	70	52.381	Equus_asinus_asinus
ENSSFOG00015011322	-	72	51.587	ENSECAG00000014264	TDP2	76	51.587	Equus_caballus
ENSSFOG00015011322	-	70	53.200	ENSEEUG00000010776	TDP2	74	52.800	Erinaceus_europaeus
ENSSFOG00015011322	-	71	57.480	ENSELUG00000016449	tdp2b	67	57.480	Esox_lucius
ENSSFOG00015011322	-	71	58.103	ENSELUG00000009321	tdp2a	79	56.800	Esox_lucius
ENSSFOG00015011322	-	71	52.381	ENSFCAG00000025612	TDP2	70	52.381	Felis_catus
ENSSFOG00015011322	-	71	51.181	ENSFALG00000004710	TDP2	71	51.181	Ficedula_albicollis
ENSSFOG00015011322	-	71	53.175	ENSFDAG00000006512	TDP2	87	53.175	Fukomys_damarensis
ENSSFOG00015011322	-	80	44.948	ENSFHEG00000013560	-	94	49.609	Fundulus_heteroclitus
ENSSFOG00015011322	-	71	51.181	ENSGALG00000013637	TDP2	69	51.181	Gallus_gallus
ENSSFOG00015011322	-	71	53.150	ENSGAGG00000002853	TDP2	65	53.150	Gopherus_agassizii
ENSSFOG00015011322	-	71	53.175	ENSGGOG00000014237	TDP2	84	52.756	Gorilla_gorilla
ENSSFOG00015011322	-	54	57.812	ENSHBUG00000005421	-	99	54.000	Haplochromis_burtoni
ENSSFOG00015011322	-	71	53.725	ENSHBUG00000002714	tdp2b	70	55.118	Haplochromis_burtoni
ENSSFOG00015011322	-	71	54.365	ENSHGLG00000008655	TDP2	74	53.175	Heterocephalus_glaber_female
ENSSFOG00015011322	-	71	54.365	ENSHGLG00100019087	TDP2	74	52.756	Heterocephalus_glaber_male
ENSSFOG00015011322	-	71	53.360	ENSIPUG00000013691	tdp2b	68	54.150	Ictalurus_punctatus
ENSSFOG00015011322	-	69	47.951	ENSJJAG00000021685	Tdp2	72	46.614	Jaculus_jaculus
ENSSFOG00015011322	-	72	52.256	ENSKMAG00000015485	-	85	53.208	Kryptolebias_marmoratus
ENSSFOG00015011322	-	72	54.510	ENSLACG00000008852	TDP2	70	54.510	Latimeria_chalumnae
ENSSFOG00015011322	-	71	60.870	ENSLOCG00000005817	tdp2b	94	60.714	Lepisosteus_oculatus
ENSSFOG00015011322	-	73	51.341	ENSLAFG00000002567	TDP2	74	51.341	Loxodonta_africana
ENSSFOG00015011322	-	71	53.571	ENSMFAG00000045296	TDP2	86	52.756	Macaca_fascicularis
ENSSFOG00015011322	-	71	53.571	ENSMMUG00000009803	TDP2	72	53.175	Macaca_mulatta
ENSSFOG00015011322	-	71	53.571	ENSMNEG00000038003	TDP2	86	52.756	Macaca_nemestrina
ENSSFOG00015011322	-	71	53.175	ENSMLEG00000028883	TDP2	86	52.362	Mandrillus_leucophaeus
ENSSFOG00015011322	-	72	56.522	ENSMAMG00000013654	tdp2b	76	56.522	Mastacembelus_armatus
ENSSFOG00015011322	-	72	52.756	ENSMZEG00005004126	tdp2b	93	52.756	Maylandia_zebra
ENSSFOG00015011322	-	71	47.451	ENSMZEG00005004103	tdp2b	87	48.425	Maylandia_zebra
ENSSFOG00015011322	-	70	50.000	ENSMZEG00005004055	tdp2b	85	50.598	Maylandia_zebra
ENSSFOG00015011322	-	71	51.765	ENSMZEG00005003950	tdp2b	70	52.756	Maylandia_zebra
ENSSFOG00015011322	-	70	52.590	ENSMZEG00005004153	tdp2b	90	54.000	Maylandia_zebra
ENSSFOG00015011322	-	62	52.535	ENSMZEG00005003980	-	76	52.535	Maylandia_zebra
ENSSFOG00015011322	-	84	48.505	ENSMZEG00005004077	tdp2b	99	50.000	Maylandia_zebra
ENSSFOG00015011322	-	71	51.575	ENSMGAG00000008014	TDP2	96	50.787	Meleagris_gallopavo
ENSSFOG00015011322	-	73	49.603	ENSMAUG00000014451	Tdp2	76	49.603	Mesocricetus_auratus
ENSSFOG00015011322	-	73	53.125	ENSMICG00000000039	TDP2	86	53.937	Microcebus_murinus
ENSSFOG00015011322	-	73	49.603	ENSMOCG00000002823	Tdp2	76	49.603	Microtus_ochrogaster
ENSSFOG00015011322	-	61	52.535	ENSMODG00000011653	TDP2	66	52.535	Monodelphis_domestica
ENSSFOG00015011322	-	70	53.571	ENSMALG00000005368	-	85	55.556	Monopterus_albus
ENSSFOG00015011322	-	73	51.190	MGP_CAROLIEiJ_G0018354	Tdp2	76	51.190	Mus_caroli
ENSSFOG00015011322	-	73	50.397	ENSMUSG00000035958	Tdp2	76	50.397	Mus_musculus
ENSSFOG00015011322	-	73	50.397	MGP_PahariEiJ_G0019417	Tdp2	75	50.397	Mus_pahari
ENSSFOG00015011322	-	73	50.397	MGP_SPRETEiJ_G0019220	Tdp2	75	49.231	Mus_spretus
ENSSFOG00015011322	-	71	52.362	ENSMPUG00000004516	TDP2	71	51.969	Mustela_putorius_furo
ENSSFOG00015011322	-	72	51.373	ENSMLUG00000013506	TDP2	75	51.373	Myotis_lucifugus
ENSSFOG00015011322	-	73	49.398	ENSNGAG00000001375	Tdp2	77	49.398	Nannospalax_galili
ENSSFOG00015011322	-	71	52.778	ENSNLEG00000002447	TDP2	81	52.362	Nomascus_leucogenys
ENSSFOG00015011322	-	72	52.381	ENSOPRG00000016299	TDP2	79	52.381	Ochotona_princeps
ENSSFOG00015011322	-	71	52.362	ENSODEG00000014018	TDP2	86	52.362	Octodon_degus
ENSSFOG00015011322	-	71	51.190	ENSOCUG00000013773	TDP2	71	50.394	Oryctolagus_cuniculus
ENSSFOG00015011322	-	72	55.469	ENSORLG00000001661	-	100	55.469	Oryzias_latipes
ENSSFOG00015011322	-	72	55.469	ENSORLG00020004634	-	94	55.469	Oryzias_latipes_hni
ENSSFOG00015011322	-	69	50.195	ENSORLG00015008190	-	93	50.195	Oryzias_latipes_hsok
ENSSFOG00015011322	-	71	51.779	ENSOMEG00000015899	-	94	53.571	Oryzias_melastigma
ENSSFOG00015011322	-	71	50.794	ENSOGAG00000025303	TDP2	69	50.794	Otolemur_garnettii
ENSSFOG00015011322	-	71	53.571	ENSPPAG00000029023	TDP2	84	53.036	Pan_paniscus
ENSSFOG00015011322	-	71	52.381	ENSPPRG00000015398	TDP2	70	52.381	Panthera_pardus
ENSSFOG00015011322	-	71	52.381	ENSPTIG00000018574	TDP2	87	51.575	Panthera_tigris_altaica
ENSSFOG00015011322	-	71	53.571	ENSPTRG00000017778	TDP2	84	53.150	Pan_troglodytes
ENSSFOG00015011322	-	71	51.969	ENSPANG00000017590	TDP2	86	51.575	Papio_anubis
ENSSFOG00015011322	-	73	55.769	ENSPKIG00000006483	tdp2b	75	55.769	Paramormyrops_kingsleyae
ENSSFOG00015011322	-	71	52.362	ENSPSIG00000004948	TDP2	88	52.362	Pelodiscus_sinensis
ENSSFOG00015011322	-	71	50.397	ENSPEMG00000001788	Tdp2	69	50.397	Peromyscus_maniculatus_bairdii
ENSSFOG00015011322	-	70	42.642	ENSPMAG00000001570	tdp2b	96	43.019	Petromyzon_marinus
ENSSFOG00015011322	-	71	51.969	ENSPCIG00000007316	TDP2	66	51.969	Phascolarctos_cinereus
ENSSFOG00015011322	-	78	48.214	ENSPFOG00000017990	-	98	50.198	Poecilia_formosa
ENSSFOG00015011322	-	82	46.823	ENSPLAG00000019439	-	92	50.593	Poecilia_latipinna
ENSSFOG00015011322	-	70	51.190	ENSPMEG00000010824	-	85	51.190	Poecilia_mexicana
ENSSFOG00015011322	-	71	53.175	ENSPPYG00000016282	TDP2	64	53.175	Pongo_abelii
ENSSFOG00015011322	-	72	52.734	ENSPCOG00000021415	TDP2	90	52.344	Propithecus_coquereli
ENSSFOG00015011322	-	70	50.936	ENSPNYG00000011504	tdp2b	88	52.256	Pundamilia_nyererei
ENSSFOG00015011322	-	71	54.118	ENSPNYG00000011532	tdp2b	70	55.906	Pundamilia_nyererei
ENSSFOG00015011322	-	71	67.857	ENSPNAG00000022162	tdp2a	64	69.444	Pygocentrus_nattereri
ENSSFOG00015011322	-	71	51.190	ENSRNOG00000018246	Tdp2	71	50.397	Rattus_norvegicus
ENSSFOG00015011322	-	71	53.175	ENSRBIG00000037119	TDP2	86	52.756	Rhinopithecus_bieti
ENSSFOG00015011322	-	71	53.175	ENSRROG00000005025	TDP2	86	52.756	Rhinopithecus_roxellana
ENSSFOG00015011322	-	73	52.778	ENSSBOG00000028734	TDP2	84	52.756	Saimiri_boliviensis_boliviensis
ENSSFOG00015011322	-	78	50.896	ENSSHAG00000002506	TDP2	72	52.381	Sarcophilus_harrisii
ENSSFOG00015011322	-	71	50.787	ENSSARG00000013547	TDP2	91	50.787	Sorex_araneus
ENSSFOG00015011322	-	71	53.150	ENSSPUG00000008288	TDP2	69	53.150	Sphenodon_punctatus
ENSSFOG00015011322	-	78	49.826	ENSSSCG00000001092	TDP2	79	51.587	Sus_scrofa
ENSSFOG00015011322	-	71	50.394	ENSTGUG00000009035	TDP2	97	50.394	Taeniopygia_guttata
ENSSFOG00015011322	-	72	51.163	ENSTRUG00000012218	-	89	51.984	Takifugu_rubripes
ENSSFOG00015011322	-	71	54.331	ENSTRUG00000014347	tdp2b	70	55.118	Takifugu_rubripes
ENSSFOG00015011322	-	71	50.775	ENSTNIG00000010260	TDP2	98	51.163	Tetraodon_nigroviridis
ENSSFOG00015011322	-	71	56.250	ENSTNIG00000017792	tdp2b	76	56.250	Tetraodon_nigroviridis
ENSSFOG00015011322	-	71	51.587	ENSTTRG00000016376	TDP2	69	52.000	Tursiops_truncatus
ENSSFOG00015011322	-	71	51.575	ENSUAMG00000025939	TDP2	73	51.575	Ursus_americanus
ENSSFOG00015011322	-	71	51.575	ENSUMAG00000020111	TDP2	85	51.575	Ursus_maritimus
ENSSFOG00015011322	-	71	54.545	ENSXETG00000014826	tdp2	68	54.545	Xenopus_tropicalis
ENSSFOG00015011322	-	79	49.474	ENSXCOG00000010778	-	75	51.181	Xiphophorus_couchianus
ENSSFOG00015011322	-	82	48.475	ENSXMAG00000022252	-	81	51.181	Xiphophorus_maculatus