EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015011375 (Gene tree)
Gene ID: 108925233
Gene Symbol: polr1d
Alias: im:7162148|zgc:136449
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 10696 bases
Position: chrKV410842.1:8264951-8275646
Accession: 108925233
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015017704	RNA_pol_L_2	PF13656.6	1.4e-28	1	1
ENSSFOP00015017704	RNA_pol_L	PF01193.24	1.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015017905	-	1714	XM_018737057	ENSSFOP00015017704	114 (aa)	XP_018592573	A0A1W4YVZ1

Gene Model

Click here to download ENSSFOG00015011375's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03020	RNA polymerase	KEGG
sfm04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015011375's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015011375	polr1d	86	35.714	ENSSFOG00015003371	polr2j	72	35.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015011375	polr1d	96	73.394	ENSG00000186184	POLR1D	96	72.072	Homo_sapiens
ENSSFOG00015011375	polr1d	92	76.190	ENSAPOG00000021882	polr1d	96	77.670	Acanthochromis_polyacanthus
ENSSFOG00015011375	polr1d	97	72.973	ENSAMEG00000019095	POLR1D	89	72.973	Ailuropoda_melanoleuca
ENSSFOG00015011375	polr1d	96	73.874	ENSACIG00000013328	polr1d	96	73.874	Amphilophus_citrinellus
ENSSFOG00015011375	polr1d	98	73.451	ENSAOCG00000018500	polr1d	99	73.451	Amphiprion_ocellaris
ENSSFOG00015011375	polr1d	98	72.566	ENSAPEG00000009489	polr1d	99	72.566	Amphiprion_percula
ENSSFOG00015011375	polr1d	96	75.455	ENSATEG00000019322	polr1d	96	75.455	Anabas_testudineus
ENSSFOG00015011375	polr1d	100	68.966	ENSACAG00000015753	POLR1D	100	68.966	Anolis_carolinensis
ENSSFOG00015011375	polr1d	97	72.072	ENSANAG00000024486	POLR1D	83	72.072	Aotus_nancymaae
ENSSFOG00015011375	polr1d	96	78.182	ENSACLG00000023805	polr1d	96	78.182	Astatotilapia_calliptera
ENSSFOG00015011375	polr1d	100	78.261	ENSAMXG00000036118	polr1d	100	78.261	Astyanax_mexicanus
ENSSFOG00015011375	polr1d	96	74.312	ENSBTAG00000033252	-	82	74.312	Bos_taurus
ENSSFOG00015011375	polr1d	96	74.312	ENSBTAG00000008642	POLR1D	82	74.312	Bos_taurus
ENSSFOG00015011375	polr1d	70	37.500	WBGene00010230	rpac-19	56	37.500	Caenorhabditis_elegans
ENSSFOG00015011375	polr1d	97	71.171	ENSCJAG00000044669	POLR1D	83	71.171	Callithrix_jacchus
ENSSFOG00015011375	polr1d	97	72.973	ENSCAFG00000006755	POLR1D	83	72.973	Canis_familiaris
ENSSFOG00015011375	polr1d	96	73.394	ENSCHIG00000021910	POLR1D	82	73.394	Capra_hircus
ENSSFOG00015011375	polr1d	92	64.486	ENSTSYG00000034852	-	88	64.486	Carlito_syrichta
ENSSFOG00015011375	polr1d	92	75.238	ENSTSYG00000026817	-	79	75.238	Carlito_syrichta
ENSSFOG00015011375	polr1d	59	58.209	ENSCAPG00000006058	-	68	58.209	Cavia_aperea
ENSSFOG00015011375	polr1d	59	58.209	ENSCPOG00000030450	-	68	58.209	Cavia_porcellus
ENSSFOG00015011375	polr1d	97	53.153	ENSCCAG00000020191	-	82	53.153	Cebus_capucinus
ENSSFOG00015011375	polr1d	96	73.394	ENSCCAG00000021349	-	82	73.394	Cebus_capucinus
ENSSFOG00015011375	polr1d	96	62.385	ENSCATG00000022900	-	81	62.385	Cercocebus_atys
ENSSFOG00015011375	polr1d	96	72.477	ENSCATG00000030710	-	82	72.477	Cercocebus_atys
ENSSFOG00015011375	polr1d	97	70.270	ENSCLAG00000017623	POLR1D	90	70.270	Chinchilla_lanigera
ENSSFOG00015011375	polr1d	87	79.000	ENSCPBG00000004719	POLR1D	99	79.000	Chrysemys_picta_bellii
ENSSFOG00015011375	polr1d	96	73.394	ENSCANG00000028632	-	82	73.394	Colobus_angolensis_palliatus
ENSSFOG00015011375	polr1d	92	72.381	ENSCANG00000037694	-	79	72.381	Colobus_angolensis_palliatus
ENSSFOG00015011375	polr1d	96	74.312	ENSCGRG00001021251	Polr1d	82	74.312	Cricetulus_griseus_chok1gshd
ENSSFOG00015011375	polr1d	96	74.312	ENSCGRG00000011639	Polr1d	82	74.312	Cricetulus_griseus_crigri
ENSSFOG00015011375	polr1d	91	75.962	ENSCSEG00000018268	polr1d	92	73.148	Cynoglossus_semilaevis
ENSSFOG00015011375	polr1d	93	80.189	ENSCVAG00000018527	polr1d	93	80.189	Cyprinodon_variegatus
ENSSFOG00015011375	polr1d	96	72.727	ENSDARG00000037570	polr1d	98	72.727	Danio_rerio
ENSSFOG00015011375	polr1d	95	72.222	ENSDNOG00000046247	-	81	72.222	Dasypus_novemcinctus
ENSSFOG00015011375	polr1d	95	73.148	ENSDNOG00000043676	-	81	73.148	Dasypus_novemcinctus
ENSSFOG00015011375	polr1d	97	71.171	ENSDORG00000029155	Polr1d	83	71.171	Dipodomys_ordii
ENSSFOG00015011375	polr1d	85	42.268	FBgn0086447	l(2)37Cg	91	42.268	Drosophila_melanogaster
ENSSFOG00015011375	polr1d	96	70.642	ENSETEG00000012797	POLR1D	88	70.642	Echinops_telfairi
ENSSFOG00015011375	polr1d	92	64.762	ENSEBUG00000011748	polr1d	73	64.762	Eptatretus_burgeri
ENSSFOG00015011375	polr1d	95	75.000	ENSEASG00005022487	POLR1D	84	75.000	Equus_asinus_asinus
ENSSFOG00015011375	polr1d	97	72.973	ENSEEUG00000013144	POLR1D	90	72.973	Erinaceus_europaeus
ENSSFOG00015011375	polr1d	93	79.245	ENSELUG00000005105	rpac2	93	79.245	Esox_lucius
ENSSFOG00015011375	polr1d	96	74.312	ENSFCAG00000030162	POLR1D	82	74.312	Felis_catus
ENSSFOG00015011375	polr1d	81	85.870	ENSFALG00000011463	POLR1D	91	85.870	Ficedula_albicollis
ENSSFOG00015011375	polr1d	96	70.642	ENSFDAG00000004463	POLR1D	82	70.642	Fukomys_damarensis
ENSSFOG00015011375	polr1d	93	77.358	ENSFHEG00000015410	polr1d	92	77.358	Fundulus_heteroclitus
ENSSFOG00015011375	polr1d	60	73.913	ENSGALG00000007470	POLR1D	68	73.913	Gallus_gallus
ENSSFOG00015011375	polr1d	95	79.630	ENSGAFG00000001693	polr1d	94	79.630	Gambusia_affinis
ENSSFOG00015011375	polr1d	99	74.336	ENSGACG00000018585	polr1d	95	74.336	Gasterosteus_aculeatus
ENSSFOG00015011375	polr1d	97	78.761	ENSGAGG00000008503	POLR1D	99	78.761	Gopherus_agassizii
ENSSFOG00015011375	polr1d	96	73.394	ENSGGOG00000004235	POLR1D	82	73.394	Gorilla_gorilla
ENSSFOG00015011375	polr1d	96	78.182	ENSHBUG00000002111	polr1d	96	78.182	Haplochromis_burtoni
ENSSFOG00015011375	polr1d	96	70.642	ENSHGLG00000003202	POLR1D	82	70.642	Heterocephalus_glaber_female
ENSSFOG00015011375	polr1d	96	70.642	ENSHGLG00100009393	POLR1D	82	70.642	Heterocephalus_glaber_male
ENSSFOG00015011375	polr1d	95	71.296	ENSHCOG00000003258	polr1d	95	71.296	Hippocampus_comes
ENSSFOG00015011375	polr1d	97	77.477	ENSIPUG00000014810	polr1d	97	77.477	Ictalurus_punctatus
ENSSFOG00015011375	polr1d	96	73.394	ENSSTOG00000013877	POLR1D	82	73.394	Ictidomys_tridecemlineatus
ENSSFOG00015011375	polr1d	97	72.072	ENSJJAG00000022671	-	93	72.072	Jaculus_jaculus
ENSSFOG00015011375	polr1d	97	54.955	ENSJJAG00000021667	-	65	54.955	Jaculus_jaculus
ENSSFOG00015011375	polr1d	94	80.556	ENSKMAG00000015256	polr1d	95	80.556	Kryptolebias_marmoratus
ENSSFOG00015011375	polr1d	95	79.630	ENSLBEG00000015919	polr1d	94	79.630	Labrus_bergylta
ENSSFOG00015011375	polr1d	94	71.963	ENSLACG00000006810	POLR1D	89	71.963	Latimeria_chalumnae
ENSSFOG00015011375	polr1d	64	84.932	ENSLOCG00000014976	polr1d	99	84.932	Lepisosteus_oculatus
ENSSFOG00015011375	polr1d	97	72.072	ENSLAFG00000032290	POLR1D	83	72.072	Loxodonta_africana
ENSSFOG00015011375	polr1d	97	72.072	ENSMFAG00000045264	POLR1D	86	72.072	Macaca_fascicularis
ENSSFOG00015011375	polr1d	73	68.675	ENSMMUG00000041570	-	75	68.675	Macaca_mulatta
ENSSFOG00015011375	polr1d	97	72.072	ENSMMUG00000020386	POLR1D	96	72.072	Macaca_mulatta
ENSSFOG00015011375	polr1d	96	73.394	ENSMNEG00000008630	-	82	73.394	Macaca_nemestrina
ENSSFOG00015011375	polr1d	89	59.804	ENSMNEG00000038120	-	79	59.804	Macaca_nemestrina
ENSSFOG00015011375	polr1d	96	73.394	ENSMLEG00000041048	-	82	73.394	Mandrillus_leucophaeus
ENSSFOG00015011375	polr1d	92	64.762	ENSMLEG00000032251	-	78	64.762	Mandrillus_leucophaeus
ENSSFOG00015011375	polr1d	91	75.000	ENSMAMG00000014834	polr1d	96	75.000	Mastacembelus_armatus
ENSSFOG00015011375	polr1d	94	75.701	ENSMZEG00005006638	polr1d	94	75.701	Maylandia_zebra
ENSSFOG00015011375	polr1d	81	86.957	ENSMGAG00000005322	POLR1D	84	86.957	Meleagris_gallopavo
ENSSFOG00015011375	polr1d	96	74.312	ENSMAUG00000001946	Polr1d	82	74.312	Mesocricetus_auratus
ENSSFOG00015011375	polr1d	96	72.477	ENSMICG00000016883	-	82	72.477	Microcebus_murinus
ENSSFOG00015011375	polr1d	96	58.716	ENSMICG00000007349	-	81	58.716	Microcebus_murinus
ENSSFOG00015011375	polr1d	96	73.394	ENSMOCG00000021288	Polr1d	82	73.394	Microtus_ochrogaster
ENSSFOG00015011375	polr1d	100	80.000	ENSMMOG00000009605	polr1d	100	80.000	Mola_mola
ENSSFOG00015011375	polr1d	93	78.302	ENSMODG00000023881	POLR1D	93	78.302	Monodelphis_domestica
ENSSFOG00015011375	polr1d	100	75.652	ENSMALG00000010652	polr1d	100	75.652	Monopterus_albus
ENSSFOG00015011375	polr1d	96	70.642	MGP_CAROLIEiJ_G0028034	Polr1d	82	70.642	Mus_caroli
ENSSFOG00015011375	polr1d	96	70.642	ENSMUSG00000029642	Polr1d	82	70.642	Mus_musculus
ENSSFOG00015011375	polr1d	96	70.642	MGP_PahariEiJ_G0024600	Polr1d	82	70.642	Mus_pahari
ENSSFOG00015011375	polr1d	96	69.725	MGP_SPRETEiJ_G0029032	Polr1d	82	69.725	Mus_spretus
ENSSFOG00015011375	polr1d	93	67.925	ENSMLUG00000004118	-	80	67.925	Myotis_lucifugus
ENSSFOG00015011375	polr1d	96	73.394	ENSMLUG00000027169	-	82	73.394	Myotis_lucifugus
ENSSFOG00015011375	polr1d	97	72.072	ENSNGAG00000006014	Polr1d	96	72.072	Nannospalax_galili
ENSSFOG00015011375	polr1d	96	78.182	ENSNBRG00000020327	polr1d	96	78.182	Neolamprologus_brichardi
ENSSFOG00015011375	polr1d	96	73.394	ENSNLEG00000000358	POLR1D	82	73.394	Nomascus_leucogenys
ENSSFOG00015011375	polr1d	97	56.757	ENSODEG00000014801	-	82	56.757	Octodon_degus
ENSSFOG00015011375	polr1d	97	69.369	ENSODEG00000005294	-	83	69.369	Octodon_degus
ENSSFOG00015011375	polr1d	92	82.857	ENSOANG00000008708	-	97	82.857	Ornithorhynchus_anatinus
ENSSFOG00015011375	polr1d	96	73.394	ENSOCUG00000015706	POLR1D	67	73.394	Oryctolagus_cuniculus
ENSSFOG00015011375	polr1d	96	75.455	ENSORLG00000010257	polr1d	96	75.455	Oryzias_latipes
ENSSFOG00015011375	polr1d	96	75.455	ENSORLG00020000533	polr1d	74	75.455	Oryzias_latipes_hni
ENSSFOG00015011375	polr1d	96	76.364	ENSORLG00015013267	polr1d	72	76.364	Oryzias_latipes_hsok
ENSSFOG00015011375	polr1d	96	76.364	ENSOMEG00000014912	polr1d	73	76.364	Oryzias_melastigma
ENSSFOG00015011375	polr1d	96	74.312	ENSOGAG00000014601	POLR1D	82	74.312	Otolemur_garnettii
ENSSFOG00015011375	polr1d	97	72.072	ENSOARG00000017005	POLR1D	85	72.072	Ovis_aries
ENSSFOG00015011375	polr1d	95	74.074	ENSPPAG00000028138	POLR1D	81	74.074	Pan_paniscus
ENSSFOG00015011375	polr1d	96	74.312	ENSPPRG00000003381	POLR1D	82	74.312	Panthera_pardus
ENSSFOG00015011375	polr1d	96	74.312	ENSPTIG00000018137	POLR1D	82	74.312	Panthera_tigris_altaica
ENSSFOG00015011375	polr1d	96	73.394	ENSPTRG00000005734	POLR1D	82	73.394	Pan_troglodytes
ENSSFOG00015011375	polr1d	92	62.857	ENSPANG00000035051	-	78	62.857	Papio_anubis
ENSSFOG00015011375	polr1d	96	73.394	ENSPANG00000020259	-	82	73.394	Papio_anubis
ENSSFOG00015011375	polr1d	96	79.091	ENSPKIG00000021891	polr1d	100	64.286	Paramormyrops_kingsleyae
ENSSFOG00015011375	polr1d	99	73.913	ENSPSIG00000011822	POLR1D	89	73.913	Pelodiscus_sinensis
ENSSFOG00015011375	polr1d	96	63.303	ENSPMGG00000012998	POLR1D	80	63.303	Periophthalmus_magnuspinnatus
ENSSFOG00015011375	polr1d	96	71.560	ENSPMGG00000010359	polr1d	95	71.560	Periophthalmus_magnuspinnatus
ENSSFOG00015011375	polr1d	96	73.394	ENSPEMG00000006336	-	84	73.394	Peromyscus_maniculatus_bairdii
ENSSFOG00015011375	polr1d	95	62.037	ENSPMAG00000004228	polr1d	91	62.037	Petromyzon_marinus
ENSSFOG00015011375	polr1d	93	78.302	ENSPCIG00000001673	POLR1D	93	78.302	Phascolarctos_cinereus
ENSSFOG00015011375	polr1d	95	79.630	ENSPFOG00000023343	polr1d	94	79.630	Poecilia_formosa
ENSSFOG00015011375	polr1d	95	79.630	ENSPLAG00000009675	polr1d	94	79.630	Poecilia_latipinna
ENSSFOG00015011375	polr1d	95	79.630	ENSPMEG00000004628	polr1d	94	79.630	Poecilia_mexicana
ENSSFOG00015011375	polr1d	95	79.630	ENSPREG00000022032	polr1d	94	79.630	Poecilia_reticulata
ENSSFOG00015011375	polr1d	96	71.560	ENSPCOG00000028175	POLR1D	82	71.560	Propithecus_coquereli
ENSSFOG00015011375	polr1d	96	78.182	ENSPNYG00000000107	polr1d	96	78.182	Pundamilia_nyererei
ENSSFOG00015011375	polr1d	87	80.808	ENSPNAG00000001512	polr1d	88	79.048	Pygocentrus_nattereri
ENSSFOG00015011375	polr1d	96	73.394	ENSRBIG00000036378	-	82	73.394	Rhinopithecus_bieti
ENSSFOG00015011375	polr1d	94	70.093	ENSRBIG00000000336	-	80	70.093	Rhinopithecus_bieti
ENSSFOG00015011375	polr1d	92	72.381	ENSRROG00000026751	-	79	72.381	Rhinopithecus_roxellana
ENSSFOG00015011375	polr1d	96	73.394	ENSRROG00000042232	-	82	73.394	Rhinopithecus_roxellana
ENSSFOG00015011375	polr1d	85	50.515	YNL113W	RPC19	77	48.624	Saccharomyces_cerevisiae
ENSSFOG00015011375	polr1d	97	72.072	ENSSBOG00000028482	-	83	72.072	Saimiri_boliviensis_boliviensis
ENSSFOG00015011375	polr1d	89	70.588	ENSSBOG00000030146	-	74	70.588	Saimiri_boliviensis_boliviensis
ENSSFOG00015011375	polr1d	93	77.358	ENSSHAG00000001190	POLR1D	82	77.358	Sarcophilus_harrisii
ENSSFOG00015011375	polr1d	96	76.364	ENSSMAG00000011861	polr1d	96	76.364	Scophthalmus_maximus
ENSSFOG00015011375	polr1d	96	75.455	ENSSDUG00000011930	polr1d	96	75.455	Seriola_dumerili
ENSSFOG00015011375	polr1d	95	72.477	ENSSLDG00000023871	polr1d	92	72.477	Seriola_lalandi_dorsalis
ENSSFOG00015011375	polr1d	97	72.973	ENSSARG00000007840	POLR1D	83	72.973	Sorex_araneus
ENSSFOG00015011375	polr1d	91	75.238	ENSSPUG00000005786	POLR1D	95	72.072	Sphenodon_punctatus
ENSSFOG00015011375	polr1d	95	76.852	ENSSPAG00000011764	polr1d	94	76.852	Stegastes_partitus
ENSSFOG00015011375	polr1d	96	72.477	ENSSSCG00000009310	POLR1D	82	72.477	Sus_scrofa
ENSSFOG00015011375	polr1d	81	85.870	ENSTGUG00000005450	POLR1D	96	85.870	Taeniopygia_guttata
ENSSFOG00015011375	polr1d	96	76.577	ENSTRUG00000019741	polr1d	97	76.577	Takifugu_rubripes
ENSSFOG00015011375	polr1d	96	72.477	ENSTBEG00000007006	POLR1D	88	72.477	Tupaia_belangeri
ENSSFOG00015011375	polr1d	97	72.973	ENSUAMG00000011413	POLR1D	83	72.973	Ursus_americanus
ENSSFOG00015011375	polr1d	97	72.973	ENSUMAG00000016968	POLR1D	87	72.973	Ursus_maritimus
ENSSFOG00015011375	polr1d	97	72.973	ENSVVUG00000009216	POLR1D	83	72.973	Vulpes_vulpes
ENSSFOG00015011375	polr1d	89	79.412	ENSXCOG00000011731	polr1d	78	79.412	Xiphophorus_couchianus
ENSSFOG00015011375	polr1d	89	79.412	ENSXMAG00000017538	polr1d	78	79.412	Xiphophorus_maculatus