EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015011410 (Gene tree)
Gene ID: 108918863
Gene Symbol: dbr1
Alias: wu:fc08f08|zgc:63930
Full Name: debranching RNA lariats 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 5840 bases
Position: chrKV411259.1:2552370-2558209
Accession: 108918863
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015017763	DBR1	PF05011.13	6.6e-36	1	1
ENSSFOP00015017773	DBR1	PF05011.13	6.6e-36	1	1
ENSSFOP00015017746	DBR1	PF05011.13	7.7e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015017947	-	2332	XM_018726468	ENSSFOP00015017746	572 (aa)	XP_018581984	A0A0P7V387
ENSSFOT00015017964	-	2206	-	ENSSFOP00015017763	530 (aa)	-	-
ENSSFOT00015017974	-	1885	-	ENSSFOP00015017773	530 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015011410's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015011410's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015011410	dbr1	98	57.587	ENSG00000138231	DBR1	94	81.081	Homo_sapiens
ENSSFOG00015011410	dbr1	99	70.236	ENSAPOG00000004318	dbr1	99	69.147	Acanthochromis_polyacanthus
ENSSFOG00015011410	dbr1	98	56.985	ENSAMEG00000006272	DBR1	99	57.065	Ailuropoda_melanoleuca
ENSSFOG00015011410	dbr1	99	68.841	ENSACIG00000020512	dbr1	99	69.510	Amphilophus_citrinellus
ENSSFOG00015011410	dbr1	99	69.439	ENSAOCG00000008060	dbr1	99	68.716	Amphiprion_ocellaris
ENSSFOG00015011410	dbr1	99	69.439	ENSAPEG00000021944	dbr1	99	68.716	Amphiprion_percula
ENSSFOG00015011410	dbr1	100	68.223	ENSATEG00000019673	dbr1	98	69.623	Anabas_testudineus
ENSSFOG00015011410	dbr1	99	60.036	ENSACAG00000016760	DBR1	99	59.633	Anolis_carolinensis
ENSSFOG00015011410	dbr1	83	65.011	ENSANAG00000028952	DBR1	99	56.863	Aotus_nancymaae
ENSSFOG00015011410	dbr1	99	69.476	ENSACLG00000024027	dbr1	99	69.173	Astatotilapia_calliptera
ENSSFOG00015011410	dbr1	99	69.692	ENSAMXG00000030736	dbr1	100	69.349	Astyanax_mexicanus
ENSSFOG00015011410	dbr1	99	56.498	ENSBTAG00000019949	DBR1	99	56.498	Bos_taurus
ENSSFOG00015011410	dbr1	71	45.408	WBGene00000937	dbr-1	78	45.408	Caenorhabditis_elegans
ENSSFOG00015011410	dbr1	98	57.222	ENSCJAG00000002433	DBR1	99	56.806	Callithrix_jacchus
ENSSFOG00015011410	dbr1	98	57.770	ENSCAFG00000007501	DBR1	99	57.838	Canis_familiaris
ENSSFOG00015011410	dbr1	98	57.770	ENSCAFG00020008060	DBR1	99	57.838	Canis_lupus_dingo
ENSSFOG00015011410	dbr1	99	56.498	ENSCHIG00000026937	DBR1	99	56.498	Capra_hircus
ENSSFOG00015011410	dbr1	99	56.058	ENSTSYG00000005317	DBR1	99	56.058	Carlito_syrichta
ENSSFOG00015011410	dbr1	98	54.495	ENSCPOG00000006179	DBR1	99	53.804	Cavia_porcellus
ENSSFOG00015011410	dbr1	98	57.273	ENSCCAG00000025708	DBR1	99	56.584	Cebus_capucinus
ENSSFOG00015011410	dbr1	82	65.675	ENSCATG00000032054	DBR1	99	57.923	Cercocebus_atys
ENSSFOG00015011410	dbr1	98	56.514	ENSCLAG00000001800	DBR1	99	55.797	Chinchilla_lanigera
ENSSFOG00015011410	dbr1	82	65.217	ENSCSAG00000010977	DBR1	99	57.377	Chlorocebus_sabaeus
ENSSFOG00015011410	dbr1	90	70.588	ENSCHOG00000000730	DBR1	89	70.588	Choloepus_hoffmanni
ENSSFOG00015011410	dbr1	99	58.456	ENSCPBG00000007633	DBR1	90	58.824	Chrysemys_picta_bellii
ENSSFOG00015011410	dbr1	83	52.154	ENSCING00000011388	-	98	52.154	Ciona_intestinalis
ENSSFOG00015011410	dbr1	71	57.407	ENSCSAVG00000007545	-	100	57.407	Ciona_savignyi
ENSSFOG00015011410	dbr1	99	57.168	ENSCANG00000024237	DBR1	99	57.603	Colobus_angolensis_palliatus
ENSSFOG00015011410	dbr1	99	57.790	ENSCGRG00001018497	Dbr1	99	57.790	Cricetulus_griseus_chok1gshd
ENSSFOG00015011410	dbr1	100	53.249	ENSCGRG00000005958	Dbr1	99	53.249	Cricetulus_griseus_crigri
ENSSFOG00015011410	dbr1	99	64.337	ENSCSEG00000002813	dbr1	99	64.516	Cynoglossus_semilaevis
ENSSFOG00015011410	dbr1	99	66.548	ENSCVAG00000019969	dbr1	100	66.552	Cyprinodon_variegatus
ENSSFOG00015011410	dbr1	99	71.675	ENSDARG00000056923	dbr1	99	71.972	Danio_rerio
ENSSFOG00015011410	dbr1	98	58.349	ENSDNOG00000043630	DBR1	99	58.333	Dasypus_novemcinctus
ENSSFOG00015011410	dbr1	77	49.889	FBgn0035838	ldbr	78	52.029	Drosophila_melanogaster
ENSSFOG00015011410	dbr1	61	83.582	ENSETEG00000011830	DBR1	79	83.582	Echinops_telfairi
ENSSFOG00015011410	dbr1	99	46.620	ENSEBUG00000007494	dbr1	100	48.506	Eptatretus_burgeri
ENSSFOG00015011410	dbr1	98	57.587	ENSEASG00005003788	DBR1	99	57.685	Equus_asinus_asinus
ENSSFOG00015011410	dbr1	98	57.770	ENSECAG00000013920	DBR1	99	57.866	Equus_caballus
ENSSFOG00015011410	dbr1	99	48.746	ENSEEUG00000007059	DBR1	99	48.746	Erinaceus_europaeus
ENSSFOG00015011410	dbr1	99	69.377	ENSELUG00000005587	dbr1	99	70.683	Esox_lucius
ENSSFOG00015011410	dbr1	98	58.318	ENSFCAG00000002229	DBR1	99	58.378	Felis_catus
ENSSFOG00015011410	dbr1	99	58.439	ENSFALG00000013467	DBR1	86	58.123	Ficedula_albicollis
ENSSFOG00015011410	dbr1	82	64.760	ENSFDAG00000009524	DBR1	99	55.856	Fukomys_damarensis
ENSSFOG00015011410	dbr1	100	67.759	ENSFHEG00000001743	dbr1	99	68.394	Fundulus_heteroclitus
ENSSFOG00015011410	dbr1	99	66.430	ENSGMOG00000006925	dbr1	99	65.897	Gadus_morhua
ENSSFOG00015011410	dbr1	99	51.812	ENSGALG00000043797	DBR1	99	51.812	Gallus_gallus
ENSSFOG00015011410	dbr1	99	68.182	ENSGAFG00000001046	dbr1	99	68.182	Gambusia_affinis
ENSSFOG00015011410	dbr1	99	65.653	ENSGACG00000009122	dbr1	100	65.893	Gasterosteus_aculeatus
ENSSFOG00015011410	dbr1	99	57.904	ENSGAGG00000001244	DBR1	100	58.856	Gopherus_agassizii
ENSSFOG00015011410	dbr1	98	51.773	ENSGGOG00000004564	DBR1	99	53.188	Gorilla_gorilla
ENSSFOG00015011410	dbr1	99	66.607	ENSHBUG00000000882	dbr1	99	67.500	Haplochromis_burtoni
ENSSFOG00015011410	dbr1	98	57.431	ENSHGLG00000014529	Dbr1	99	56.703	Heterocephalus_glaber_female
ENSSFOG00015011410	dbr1	98	57.431	ENSHGLG00100013202	Dbr1	99	56.703	Heterocephalus_glaber_male
ENSSFOG00015011410	dbr1	99	64.130	ENSHCOG00000004179	dbr1	99	64.855	Hippocampus_comes
ENSSFOG00015011410	dbr1	99	70.294	ENSIPUG00000023749	dbr1	100	70.639	Ictalurus_punctatus
ENSSFOG00015011410	dbr1	98	56.545	ENSSTOG00000007122	DBR1	99	56.071	Ictidomys_tridecemlineatus
ENSSFOG00015011410	dbr1	99	57.040	ENSJJAG00000017080	Dbr1	99	56.679	Jaculus_jaculus
ENSSFOG00015011410	dbr1	99	65.586	ENSKMAG00000004869	dbr1	100	64.808	Kryptolebias_marmoratus
ENSSFOG00015011410	dbr1	99	67.414	ENSLBEG00000021307	dbr1	99	67.938	Labrus_bergylta
ENSSFOG00015011410	dbr1	99	62.298	ENSLACG00000005547	DBR1	99	62.298	Latimeria_chalumnae
ENSSFOG00015011410	dbr1	99	70.280	ENSLOCG00000004160	dbr1	99	70.928	Lepisosteus_oculatus
ENSSFOG00015011410	dbr1	99	55.839	ENSLAFG00000005827	DBR1	99	55.839	Loxodonta_africana
ENSSFOG00015011410	dbr1	82	65.675	ENSMFAG00000043642	DBR1	99	57.923	Macaca_fascicularis
ENSSFOG00015011410	dbr1	82	65.675	ENSMMUG00000021284	DBR1	99	57.923	Macaca_mulatta
ENSSFOG00015011410	dbr1	82	65.675	ENSMNEG00000041740	DBR1	99	57.923	Macaca_nemestrina
ENSSFOG00015011410	dbr1	73	51.263	ENSMLEG00000034542	DBR1	95	47.347	Mandrillus_leucophaeus
ENSSFOG00015011410	dbr1	99	68.448	ENSMAMG00000012205	dbr1	99	67.931	Mastacembelus_armatus
ENSSFOG00015011410	dbr1	99	66.607	ENSMZEG00005021338	dbr1	99	67.500	Maylandia_zebra
ENSSFOG00015011410	dbr1	80	52.360	ENSMGAG00000002142	DBR1	99	52.360	Meleagris_gallopavo
ENSSFOG00015011410	dbr1	99	56.912	ENSMAUG00000010037	Dbr1	99	56.912	Mesocricetus_auratus
ENSSFOG00015011410	dbr1	98	56.490	ENSMICG00000049533	DBR1	99	56.318	Microcebus_murinus
ENSSFOG00015011410	dbr1	99	57.220	ENSMOCG00000018746	Dbr1	99	56.475	Microtus_ochrogaster
ENSSFOG00015011410	dbr1	99	67.442	ENSMMOG00000000719	dbr1	99	67.084	Mola_mola
ENSSFOG00015011410	dbr1	99	58.123	ENSMODG00000018554	DBR1	99	58.123	Monodelphis_domestica
ENSSFOG00015011410	dbr1	99	66.312	ENSMALG00000022283	dbr1	97	65.248	Monopterus_albus
ENSSFOG00015011410	dbr1	98	57.664	MGP_CAROLIEiJ_G0032564	Dbr1	95	73.418	Mus_caroli
ENSSFOG00015011410	dbr1	100	57.401	ENSMUSG00000032469	Dbr1	95	73.418	Mus_musculus
ENSSFOG00015011410	dbr1	100	57.477	MGP_PahariEiJ_G0015433	Dbr1	95	73.418	Mus_pahari
ENSSFOG00015011410	dbr1	100	57.220	MGP_SPRETEiJ_G0033708	Dbr1	95	73.418	Mus_spretus
ENSSFOG00015011410	dbr1	98	57.431	ENSMPUG00000009230	DBR1	99	57.505	Mustela_putorius_furo
ENSSFOG00015011410	dbr1	98	57.636	ENSMLUG00000026117	DBR1	99	58.802	Myotis_lucifugus
ENSSFOG00015011410	dbr1	99	56.396	ENSNGAG00000003518	Dbr1	99	56.396	Nannospalax_galili
ENSSFOG00015011410	dbr1	99	67.071	ENSNBRG00000016318	dbr1	99	67.500	Neolamprologus_brichardi
ENSSFOG00015011410	dbr1	98	57.827	ENSNLEG00000032263	DBR1	97	57.741	Nomascus_leucogenys
ENSSFOG00015011410	dbr1	100	57.790	ENSMEUG00000009188	DBR1	100	57.790	Notamacropus_eugenii
ENSSFOG00015011410	dbr1	94	50.000	ENSOPRG00000016510	DBR1	100	49.807	Ochotona_princeps
ENSSFOG00015011410	dbr1	100	55.957	ENSODEG00000018178	DBR1	99	55.957	Octodon_degus
ENSSFOG00015011410	dbr1	99	65.630	ENSONIG00000013801	dbr1	99	66.078	Oreochromis_niloticus
ENSSFOG00015011410	dbr1	88	56.740	ENSOANG00000007783	DBR1	100	56.426	Ornithorhynchus_anatinus
ENSSFOG00015011410	dbr1	93	56.615	ENSOCUG00000015129	DBR1	89	56.346	Oryctolagus_cuniculus
ENSSFOG00015011410	dbr1	99	67.407	ENSORLG00015001112	dbr1	99	68.148	Oryzias_latipes_hsok
ENSSFOG00015011410	dbr1	99	68.275	ENSOMEG00000000857	dbr1	99	67.098	Oryzias_melastigma
ENSSFOG00015011410	dbr1	82	65.217	ENSOGAG00000033095	DBR1	99	57.587	Otolemur_garnettii
ENSSFOG00015011410	dbr1	99	55.415	ENSOARG00000007589	DBR1	99	55.415	Ovis_aries
ENSSFOG00015011410	dbr1	98	56.028	ENSPPAG00000031137	DBR1	99	57.559	Pan_paniscus
ENSSFOG00015011410	dbr1	98	58.318	ENSPPRG00000013629	DBR1	99	58.378	Panthera_pardus
ENSSFOG00015011410	dbr1	96	57.570	ENSPTIG00000012674	DBR1	98	57.643	Panthera_tigris_altaica
ENSSFOG00015011410	dbr1	98	55.851	ENSPTRG00000015441	DBR1	99	57.377	Pan_troglodytes
ENSSFOG00015011410	dbr1	98	56.150	ENSPANG00000012664	DBR1	99	57.923	Papio_anubis
ENSSFOG00015011410	dbr1	99	74.653	ENSPKIG00000000310	dbr1	99	74.479	Paramormyrops_kingsleyae
ENSSFOG00015011410	dbr1	87	56.173	ENSPSIG00000015486	DBR1	99	57.652	Pelodiscus_sinensis
ENSSFOG00015011410	dbr1	98	57.770	ENSPEMG00000020602	Dbr1	98	57.428	Peromyscus_maniculatus_bairdii
ENSSFOG00015011410	dbr1	71	60.317	ENSPMAG00000008620	dbr1	99	60.317	Petromyzon_marinus
ENSSFOG00015011410	dbr1	100	57.895	ENSPCIG00000006494	DBR1	99	57.895	Phascolarctos_cinereus
ENSSFOG00015011410	dbr1	71	59.024	ENSPLAG00000002421	-	99	61.619	Poecilia_latipinna
ENSSFOG00015011410	dbr1	99	69.636	ENSPLAG00000011665	dbr1	99	69.636	Poecilia_latipinna
ENSSFOG00015011410	dbr1	99	69.510	ENSPMEG00000010080	dbr1	99	69.510	Poecilia_mexicana
ENSSFOG00015011410	dbr1	74	58.795	ENSPMEG00000020884	-	97	58.795	Poecilia_mexicana
ENSSFOG00015011410	dbr1	99	69.526	ENSPREG00000020157	dbr1	99	69.526	Poecilia_reticulata
ENSSFOG00015011410	dbr1	98	57.827	ENSPPYG00000014139	DBR1	99	57.741	Pongo_abelii
ENSSFOG00015011410	dbr1	71	68.338	ENSPCAG00000012956	DBR1	97	68.338	Procavia_capensis
ENSSFOG00015011410	dbr1	98	57.038	ENSPCOG00000016894	DBR1	99	56.679	Propithecus_coquereli
ENSSFOG00015011410	dbr1	98	48.991	ENSPVAG00000007713	DBR1	99	49.186	Pteropus_vampyrus
ENSSFOG00015011410	dbr1	99	67.071	ENSPNYG00000015453	dbr1	99	67.558	Pundamilia_nyererei
ENSSFOG00015011410	dbr1	99	70.345	ENSPNAG00000025595	dbr1	99	72.213	Pygocentrus_nattereri
ENSSFOG00015011410	dbr1	100	57.734	ENSRNOG00000014588	Dbr1	99	57.194	Rattus_norvegicus
ENSSFOG00015011410	dbr1	98	57.565	ENSRBIG00000045002	DBR1	99	57.559	Rhinopithecus_bieti
ENSSFOG00015011410	dbr1	98	57.565	ENSRROG00000044819	DBR1	99	57.559	Rhinopithecus_roxellana
ENSSFOG00015011410	dbr1	54	38.643	YKL149C	DBR1	83	38.643	Saccharomyces_cerevisiae
ENSSFOG00015011410	dbr1	98	57.297	ENSSBOG00000032048	DBR1	99	56.537	Saimiri_boliviensis_boliviensis
ENSSFOG00015011410	dbr1	100	57.651	ENSSHAG00000006752	DBR1	99	56.940	Sarcophilus_harrisii
ENSSFOG00015011410	dbr1	99	69.746	ENSSMAG00000016078	dbr1	99	70.109	Scophthalmus_maximus
ENSSFOG00015011410	dbr1	99	69.535	ENSSDUG00000017849	dbr1	99	69.257	Seriola_dumerili
ENSSFOG00015011410	dbr1	99	69.085	ENSSLDG00000019891	dbr1	99	69.257	Seriola_lalandi_dorsalis
ENSSFOG00015011410	dbr1	99	53.125	ENSSARG00000009558	-	99	53.125	Sorex_araneus
ENSSFOG00015011410	dbr1	54	74.667	ENSSARG00000003148	-	74	74.667	Sorex_araneus
ENSSFOG00015011410	dbr1	92	53.010	ENSSPUG00000004724	DBR1	93	56.148	Sphenodon_punctatus
ENSSFOG00015011410	dbr1	99	70.036	ENSSPAG00000016892	dbr1	99	69.078	Stegastes_partitus
ENSSFOG00015011410	dbr1	99	57.248	ENSSSCG00000031098	DBR1	99	57.064	Sus_scrofa
ENSSFOG00015011410	dbr1	95	56.546	ENSTGUG00000007073	DBR1	98	56.167	Taeniopygia_guttata
ENSSFOG00015011410	dbr1	99	67.748	ENSTRUG00000021594	dbr1	98	67.027	Takifugu_rubripes
ENSSFOG00015011410	dbr1	99	68.000	ENSTNIG00000006710	dbr1	99	67.636	Tetraodon_nigroviridis
ENSSFOG00015011410	dbr1	99	57.428	ENSTTRG00000004020	DBR1	99	57.428	Tursiops_truncatus
ENSSFOG00015011410	dbr1	99	57.297	ENSUAMG00000004639	DBR1	99	57.297	Ursus_americanus
ENSSFOG00015011410	dbr1	98	57.221	ENSUMAG00000015012	DBR1	99	57.297	Ursus_maritimus
ENSSFOG00015011410	dbr1	99	53.249	ENSVPAG00000011711	DBR1	99	53.249	Vicugna_pacos
ENSSFOG00015011410	dbr1	98	57.587	ENSVVUG00000026604	DBR1	99	57.658	Vulpes_vulpes
ENSSFOG00015011410	dbr1	99	59.559	ENSXETG00000027491	dbr1	99	59.191	Xenopus_tropicalis
ENSSFOG00015011410	dbr1	99	67.572	ENSXCOG00000018078	dbr1	99	68.784	Xiphophorus_couchianus
ENSSFOG00015011410	dbr1	99	69.328	ENSXMAG00000007311	dbr1	99	69.091	Xiphophorus_maculatus