EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015011531 (Gene tree)
Gene ID: 108937880
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 454-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 83232 bases
Position: chrKV411151.1:465991-549222
Accession: 108937880
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015017938	zf-C2H2	PF00096.26	3.7e-15	1	2
ENSSFOP00015017938	zf-C2H2	PF00096.26	3.7e-15	2	2
ENSSFOP00015017945	zf-C2H2	PF00096.26	8.4e-11	1	2
ENSSFOP00015017945	zf-C2H2	PF00096.26	8.4e-11	2	2
ENSSFOP00015017951	zf-C2H2	PF00096.26	8.4e-11	1	2
ENSSFOP00015017951	zf-C2H2	PF00096.26	8.4e-11	2	2
ENSSFOP00015017938	zf-met	PF12874.7	6.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015018151	-	2602	-	ENSSFOP00015017945	363 (aa)	-	A0A1W5AL74
ENSSFOT00015018157	-	2878	XM_018758090	ENSSFOP00015017951	363 (aa)	XP_018613606	A0A1W5AL74
ENSSFOT00015018144	-	420	-	ENSSFOP00015017938	139 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015011531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015011531's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015011531	-	89	35.238	ENSSFOG00015015427	znf366	50	38.824
ENSSFOG00015011531	-	88	40.698	ENSSFOG00015010829	-	73	47.706
ENSSFOG00015011531	-	81	35.052	ENSSFOG00015012089	ZNF319	88	43.269
ENSSFOG00015011531	-	88	42.056	ENSSFOG00015013448	-	78	46.970
ENSSFOG00015011531	-	88	51.163	ENSSFOG00015015878	-	91	45.370
ENSSFOG00015011531	-	88	41.860	ENSSFOG00015019818	-	70	46.296
ENSSFOG00015011531	-	99	42.157	ENSSFOG00015020993	-	79	44.681
ENSSFOG00015011531	-	86	42.683	ENSSFOG00015020478	prdm5	57	46.667
ENSSFOG00015011531	-	90	43.023	ENSSFOG00015015958	-	56	44.340
ENSSFOG00015011531	-	84	38.356	ENSSFOG00015023295	znf652	73	41.667
ENSSFOG00015011531	-	88	39.286	ENSSFOG00015001123	-	50	43.519
ENSSFOG00015011531	-	88	43.750	ENSSFOG00015000652	ZNF775	83	43.750
ENSSFOG00015011531	-	80	35.227	ENSSFOG00015023669	-	90	47.561
ENSSFOG00015011531	-	88	41.667	ENSSFOG00015006083	-	56	43.478
ENSSFOG00015011531	-	88	46.479	ENSSFOG00015008577	-	93	46.226
ENSSFOG00015011531	-	63	43.137	ENSSFOG00015001195	SCRT1	53	47.368
ENSSFOG00015011531	-	91	39.535	ENSSFOG00015006108	-	56	40.741
ENSSFOG00015011531	-	96	37.647	ENSSFOG00015017155	-	52	37.647
ENSSFOG00015011531	-	72	38.000	ENSSFOG00015021578	snai1a	55	31.667
ENSSFOG00015011531	-	88	44.231	ENSSFOG00015009678	-	60	43.396
ENSSFOG00015011531	-	88	40.952	ENSSFOG00015015384	-	77	44.340
ENSSFOG00015011531	-	86	35.833	ENSSFOG00015012207	-	71	41.667
ENSSFOG00015011531	-	90	42.478	ENSSFOG00015021831	-	57	42.478
ENSSFOG00015011531	-	89	42.391	ENSSFOG00015003121	znf668	82	39.623

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015011531	-	88	40.566	ENSAPOG00000019138	-	52	40.566	Acanthochromis_polyacanthus
ENSSFOG00015011531	-	86	38.017	ENSACIG00000004641	-	52	47.826	Amphilophus_citrinellus
ENSSFOG00015011531	-	89	41.791	ENSACIG00000017892	-	70	42.105	Amphilophus_citrinellus
ENSSFOG00015011531	-	88	44.444	ENSAOCG00000016897	-	63	44.444	Amphiprion_ocellaris
ENSSFOG00015011531	-	77	38.571	ENSAOCG00000001325	-	76	35.714	Amphiprion_ocellaris
ENSSFOG00015011531	-	89	45.455	ENSAPEG00000010013	-	55	42.391	Amphiprion_percula
ENSSFOG00015011531	-	88	44.444	ENSAPEG00000001556	-	63	44.444	Amphiprion_percula
ENSSFOG00015011531	-	87	37.383	ENSATEG00000018931	-	84	40.870	Anabas_testudineus
ENSSFOG00015011531	-	76	40.230	ENSACLG00000011658	-	86	41.892	Astatotilapia_calliptera
ENSSFOG00015011531	-	80	40.845	ENSAMXG00000029518	-	53	39.167	Astyanax_mexicanus
ENSSFOG00015011531	-	95	46.226	ENSCSEG00000008525	-	82	46.226	Cynoglossus_semilaevis
ENSSFOG00015011531	-	68	43.750	ENSCSEG00000015593	-	75	49.091	Cynoglossus_semilaevis
ENSSFOG00015011531	-	83	38.158	ENSCSEG00000010264	-	64	42.105	Cynoglossus_semilaevis
ENSSFOG00015011531	-	81	43.038	ENSCSEG00000010453	-	56	43.750	Cynoglossus_semilaevis
ENSSFOG00015011531	-	88	35.537	ENSCVAG00000006653	-	55	44.186	Cyprinodon_variegatus
ENSSFOG00015011531	-	79	35.294	ENSCVAG00000020141	-	57	37.975	Cyprinodon_variegatus
ENSSFOG00015011531	-	81	40.000	ENSCVAG00000015616	-	76	37.500	Cyprinodon_variegatus
ENSSFOG00015011531	-	87	39.450	ENSCVAG00000003250	-	64	44.860	Cyprinodon_variegatus
ENSSFOG00015011531	-	75	48.780	ENSCVAG00000012682	-	61	47.253	Cyprinodon_variegatus
ENSSFOG00015011531	-	88	40.217	ENSEBUG00000014432	-	91	47.727	Eptatretus_burgeri
ENSSFOG00015011531	-	76	40.698	ENSEBUG00000007931	-	60	40.741	Eptatretus_burgeri
ENSSFOG00015011531	-	89	40.000	ENSELUG00000001909	-	60	42.241	Esox_lucius
ENSSFOG00015011531	-	77	47.674	ENSELUG00000024007	-	55	45.631	Esox_lucius
ENSSFOG00015011531	-	78	40.404	ENSGAFG00000007528	-	55	40.404	Gambusia_affinis
ENSSFOG00015011531	-	91	38.462	ENSGAFG00000008204	-	64	40.566	Gambusia_affinis
ENSSFOG00015011531	-	80	42.105	ENSGAFG00000001879	-	71	41.509	Gambusia_affinis
ENSSFOG00015011531	-	88	40.323	ENSHBUG00000006656	-	57	40.323	Haplochromis_burtoni
ENSSFOG00015011531	-	88	43.023	ENSHCOG00000008550	-	52	45.283	Hippocampus_comes
ENSSFOG00015011531	-	83	44.118	ENSHCOG00000020670	-	72	47.059	Hippocampus_comes
ENSSFOG00015011531	-	90	40.367	ENSHCOG00000013489	-	88	44.898	Hippocampus_comes
ENSSFOG00015011531	-	88	43.023	ENSHCOG00000001873	-	52	45.283	Hippocampus_comes
ENSSFOG00015011531	-	88	45.055	ENSHCOG00000015497	-	72	45.055	Hippocampus_comes
ENSSFOG00015011531	-	76	36.585	ENSKMAG00000014184	-	54	32.381	Kryptolebias_marmoratus
ENSSFOG00015011531	-	62	34.066	ENSKMAG00000021873	-	59	31.868	Kryptolebias_marmoratus
ENSSFOG00015011531	-	77	36.620	ENSKMAG00000007699	-	62	36.620	Kryptolebias_marmoratus
ENSSFOG00015011531	-	77	40.000	ENSLBEG00000006161	-	81	40.000	Labrus_bergylta
ENSSFOG00015011531	-	82	37.383	ENSLBEG00000011210	-	53	42.391	Labrus_bergylta
ENSSFOG00015011531	-	89	41.860	ENSLBEG00000001132	-	67	42.105	Labrus_bergylta
ENSSFOG00015011531	-	81	38.372	ENSLBEG00000007106	-	62	40.566	Labrus_bergylta
ENSSFOG00015011531	-	88	32.479	ENSLBEG00000017424	-	91	40.385	Labrus_bergylta
ENSSFOG00015011531	-	98	40.777	ENSLOCG00000004208	-	94	39.252	Lepisosteus_oculatus
ENSSFOG00015011531	-	99	37.209	ENSMAMG00000017939	-	74	46.809	Mastacembelus_armatus
ENSSFOG00015011531	-	90	39.024	ENSMZEG00005013907	-	73	39.024	Maylandia_zebra
ENSSFOG00015011531	-	82	48.101	ENSMMOG00000013330	-	66	48.101	Mola_mola
ENSSFOG00015011531	-	88	38.710	ENSMALG00000004279	-	73	42.991	Monopterus_albus
ENSSFOG00015011531	-	78	43.902	ENSONIG00000007967	-	59	41.905	Oreochromis_niloticus
ENSSFOG00015011531	-	85	40.244	ENSONIG00000005050	-	84	42.647	Oreochromis_niloticus
ENSSFOG00015011531	-	93	39.189	ENSORLG00000002268	-	77	40.984	Oryzias_latipes
ENSSFOG00015011531	-	96	33.065	ENSORLG00000021885	-	72	37.391	Oryzias_latipes
ENSSFOG00015011531	-	81	38.095	ENSORLG00020018921	-	68	38.679	Oryzias_latipes_hni
ENSSFOG00015011531	-	88	43.284	ENSORLG00015018099	-	69	43.284	Oryzias_latipes_hsok
ENSSFOG00015011531	-	96	32.090	ENSOMEG00000005578	-	66	37.273	Oryzias_melastigma
ENSSFOG00015011531	-	94	42.857	ENSPMGG00000019750	-	71	42.857	Periophthalmus_magnuspinnatus
ENSSFOG00015011531	-	96	51.282	ENSPMGG00000002659	-	64	51.282	Periophthalmus_magnuspinnatus
ENSSFOG00015011531	-	80	39.241	ENSPMGG00000002661	-	62	42.202	Periophthalmus_magnuspinnatus
ENSSFOG00015011531	-	88	39.394	ENSPMGG00000009571	-	73	42.453	Periophthalmus_magnuspinnatus
ENSSFOG00015011531	-	90	40.351	ENSPMGG00000002455	-	88	39.130	Periophthalmus_magnuspinnatus
ENSSFOG00015011531	-	78	43.678	ENSPMGG00000007051	-	63	36.879	Periophthalmus_magnuspinnatus
ENSSFOG00015011531	-	85	35.106	ENSPMAG00000004189	-	85	35.294	Petromyzon_marinus
ENSSFOG00015011531	-	77	33.766	ENSPMAG00000002022	-	72	36.634	Petromyzon_marinus
ENSSFOG00015011531	-	81	40.244	ENSPMAG00000000839	-	91	40.244	Petromyzon_marinus
ENSSFOG00015011531	-	92	38.182	ENSPFOG00000018860	-	99	44.860	Poecilia_formosa
ENSSFOG00015011531	-	89	40.000	ENSPFOG00000009491	-	52	42.991	Poecilia_formosa
ENSSFOG00015011531	-	91	43.023	ENSPLAG00000014832	-	76	40.909	Poecilia_latipinna
ENSSFOG00015011531	-	91	43.023	ENSPLAG00000008941	-	79	44.860	Poecilia_latipinna
ENSSFOG00015011531	-	83	43.678	ENSPLAG00000010067	-	62	43.678	Poecilia_latipinna
ENSSFOG00015011531	-	91	38.356	ENSPMEG00000002953	-	58	47.619	Poecilia_mexicana
ENSSFOG00015011531	-	86	50.980	ENSPMEG00000024117	-	73	42.718	Poecilia_mexicana
ENSSFOG00015011531	-	91	43.023	ENSPMEG00000005210	-	76	40.909	Poecilia_mexicana
ENSSFOG00015011531	-	88	54.545	ENSPREG00000009488	-	90	54.545	Poecilia_reticulata
ENSSFOG00015011531	-	80	39.080	ENSPREG00000002603	-	52	43.038	Poecilia_reticulata
ENSSFOG00015011531	-	93	38.614	ENSPNYG00000017888	-	79	42.241	Pundamilia_nyererei
ENSSFOG00015011531	-	83	46.429	ENSPNAG00000005946	-	90	44.762	Pygocentrus_nattereri
ENSSFOG00015011531	-	99	43.023	ENSSMAG00000013291	-	92	42.424	Scophthalmus_maximus
ENSSFOG00015011531	-	80	47.059	ENSSLDG00000014436	-	71	47.059	Seriola_lalandi_dorsalis
ENSSFOG00015011531	-	89	41.818	ENSSPAG00000011544	-	52	42.373	Stegastes_partitus
ENSSFOG00015011531	-	97	35.938	ENSSPAG00000011533	-	79	42.373	Stegastes_partitus
ENSSFOG00015011531	-	92	44.118	ENSXETG00000012506	znf91	88	45.872	Xenopus_tropicalis
ENSSFOG00015011531	-	78	39.394	ENSXCOG00000020768	-	70	40.000	Xiphophorus_couchianus
ENSSFOG00015011531	-	81	54.839	ENSXCOG00000000254	-	55	54.839	Xiphophorus_couchianus
ENSSFOG00015011531	-	80	41.667	ENSXCOG00000003441	-	58	38.679	Xiphophorus_couchianus
ENSSFOG00015011531	-	91	43.023	ENSXMAG00000012936	-	77	40.909	Xiphophorus_maculatus