EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSFOG00015011547 (Gene tree)
Gene ID
108939517
Gene Symbol
zgc:171971
Alias
-
Full Name
DNA-directed RNA polymerase III subunit RPC4-like
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Plus strand
Length
8332 bases
Position
chrKV411190.1:3094280-3102611
Accession
108939517
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015017946RNA_pol_Rpc4PF05132.141.8e-2511
ENSSFOP00015017954RNA_pol_Rpc4PF05132.148e-2511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015018152-5812XM_018760907ENSSFOP00015017946356 (aa)XP_018616423A0A1W5AS93
ENSSFOT00015018160-5765-ENSSFOP00015017954358 (aa)--
Gene Model
Click here to download ENSSFOG00015011547's gene model file
Pathways
Pathway IDPathway NameSource
sfm03020RNA polymeraseKEGG
sfm04623Cytosolic DNA-sensing pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015011547's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSFOG00015011547zgc:1719719640.872ENSSFOG00015010611polr3d8840.710
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015011547zgc:1719719745.528ENSG00000168495POLR3D9044.772Homo_sapiens
ENSSFOG00015011547zgc:1719719751.253ENSAPOG00000017634zgc:1719718552.368Acanthochromis_polyacanthus
ENSSFOG00015011547zgc:1719719639.554ENSAPOG00000012197polr3d9040.563Acanthochromis_polyacanthus
ENSSFOG00015011547zgc:1719719645.604ENSAMEG00000003221POLR3D8946.448Ailuropoda_melanoleuca
ENSSFOG00015011547zgc:1719719148.397ENSACIG00000003707zgc:1719718149.701Amphilophus_citrinellus
ENSSFOG00015011547zgc:1719719640.000ENSACIG00000017832polr3d9041.243Amphilophus_citrinellus
ENSSFOG00015011547zgc:1719719753.279ENSAOCG00000007733zgc:1719718555.307Amphiprion_ocellaris
ENSSFOG00015011547zgc:1719719639.831ENSAOCG00000005037polr3d8941.360Amphiprion_ocellaris
ENSSFOG00015011547zgc:1719719753.005ENSAPEG00000016107zgc:1719718555.028Amphiprion_percula
ENSSFOG00015011547zgc:1719719639.833ENSAPEG00000013751polr3d9040.921Amphiprion_percula
ENSSFOG00015011547zgc:1719719639.607ENSATEG00000023119polr3d8941.127Anabas_testudineus
ENSSFOG00015011547zgc:1719719152.959ENSATEG00000023125zgc:1719718650.975Anabas_testudineus
ENSSFOG00015011547zgc:1719719245.170ENSAPLG00000014393POLR3D10042.898Anas_platyrhynchos
ENSSFOG00015011547zgc:1719718643.731ENSACAG00000010592POLR3D8343.119Anolis_carolinensis
ENSSFOG00015011547zgc:1719719745.257ENSANAG00000030023POLR3D9044.504Aotus_nancymaae
ENSSFOG00015011547zgc:1719719639.452ENSACLG00000010147polr3d8940.548Astatotilapia_calliptera
ENSSFOG00015011547zgc:1719719154.519ENSACLG00000000074zgc:1719718753.203Astatotilapia_calliptera
ENSSFOG00015011547zgc:1719719459.880ENSAMXG00000019418zgc:1719718361.280Astyanax_mexicanus
ENSSFOG00015011547zgc:1719719043.220ENSAMXG00000010079polr3d8741.333Astyanax_mexicanus
ENSSFOG00015011547zgc:1719719743.700ENSBTAG00000010036POLR3D9043.700Bos_taurus
ENSSFOG00015011547zgc:1719719745.257ENSCJAG00000020278POLR3D8344.504Callithrix_jacchus
ENSSFOG00015011547zgc:1719719744.595ENSCAFG00000009455POLR3D9045.013Canis_familiaris
ENSSFOG00015011547zgc:1719719744.595ENSCAFG00020013027POLR3D9045.013Canis_lupus_dingo
ENSSFOG00015011547zgc:1719719744.236ENSCHIG00000012279POLR3D9044.236Capra_hircus
ENSSFOG00015011547zgc:1719719746.341ENSTSYG00000009055POLR3D9046.341Carlito_syrichta
ENSSFOG00015011547zgc:1719719245.533ENSCAPG00000010394POLR3D9845.299Cavia_aperea
ENSSFOG00015011547zgc:1719719744.414ENSCPOG00000003679POLR3D9045.013Cavia_porcellus
ENSSFOG00015011547zgc:1719719745.528ENSCCAG00000019817POLR3D9045.528Cebus_capucinus
ENSSFOG00015011547zgc:1719719745.652ENSCATG00000025950POLR3D9045.283Cercocebus_atys
ENSSFOG00015011547zgc:1719719744.236ENSCLAG00000014993POLR3D9044.236Chinchilla_lanigera
ENSSFOG00015011547zgc:1719719745.652ENSCSAG00000016525POLR3D9045.283Chlorocebus_sabaeus
ENSSFOG00015011547zgc:1719719740.108ENSCHOG00000000228POLR3D9040.431Choloepus_hoffmanni
ENSSFOG00015011547zgc:1719719744.652ENSCPBG00000001313POLR3D9043.700Chrysemys_picta_bellii
ENSSFOG00015011547zgc:1719719033.626ENSCING00000008141-6932.292Ciona_intestinalis
ENSSFOG00015011547zgc:1719719034.835ENSCSAVG00000007119-6832.624Ciona_savignyi
ENSSFOG00015011547zgc:1719719744.892ENSCANG00000043589POLR3D9045.553Colobus_angolensis_palliatus
ENSSFOG00015011547zgc:1719719745.455ENSCGRG00001010339Polr3d9045.283Cricetulus_griseus_chok1gshd
ENSSFOG00015011547zgc:1719719745.455ENSCGRG00000003956Polr3d9045.283Cricetulus_griseus_crigri
ENSSFOG00015011547zgc:1719719044.311ENSCSEG00000008123polr3d8943.380Cynoglossus_semilaevis
ENSSFOG00015011547zgc:1719719051.553ENSCSEG00000015509zgc:1719718051.242Cynoglossus_semilaevis
ENSSFOG00015011547zgc:1719719143.519ENSCVAG00000009078-8444.000Cyprinodon_variegatus
ENSSFOG00015011547zgc:1719719042.388ENSCVAG00000020687polr3d9040.563Cyprinodon_variegatus
ENSSFOG00015011547zgc:1719719363.174ENSDARG00000042054zgc:1719718462.874Danio_rerio
ENSSFOG00015011547zgc:1719719042.985ENSDARG00000104516polr3d9141.690Danio_rerio
ENSSFOG00015011547zgc:1719719744.142ENSDNOG00000013488POLR3D9044.744Dasypus_novemcinctus
ENSSFOG00015011547zgc:1719719744.173ENSDORG00000011174Polr3d9043.700Dipodomys_ordii
ENSSFOG00015011547zgc:1719719744.986ENSETEG00000016516POLR3D9044.744Echinops_telfairi
ENSSFOG00015011547zgc:1719717736.392ENSEBUG00000014414polr3d8936.392Eptatretus_burgeri
ENSSFOG00015011547zgc:1719719744.444ENSEASG00005018824POLR3D9044.474Equus_asinus_asinus
ENSSFOG00015011547zgc:1719719745.528ENSECAG00000025090-9045.553Equus_caballus
ENSSFOG00015011547zgc:1719719745.283ENSEEUG00000007632POLR3D9045.283Erinaceus_europaeus
ENSSFOG00015011547zgc:1719719262.537ENSELUG00000017642zgc:1719718361.357Esox_lucius
ENSSFOG00015011547zgc:1719719642.105ENSELUG00000016978polr3d9041.828Esox_lucius
ENSSFOG00015011547zgc:1719719744.236ENSFCAG00000005346POLR3D9044.772Felis_catus
ENSSFOG00015011547zgc:1719719147.009ENSFALG00000010907POLR3D10046.307Ficedula_albicollis
ENSSFOG00015011547zgc:1719719744.054ENSFDAG00000010144POLR3D9043.127Fukomys_damarensis
ENSSFOG00015011547zgc:1719719045.455ENSFHEG00000003803-8245.455Fundulus_heteroclitus
ENSSFOG00015011547zgc:1719719641.011ENSFHEG00000000508polr3d9042.535Fundulus_heteroclitus
ENSSFOG00015011547zgc:1719719747.384ENSGMOG00000015819zgc:1719718547.384Gadus_morhua
ENSSFOG00015011547zgc:1719719642.382ENSGMOG00000006293polr3d9643.490Gadus_morhua
ENSSFOG00015011547zgc:1719718446.835ENSGALG00000032501-6045.763Gallus_gallus
ENSSFOG00015011547zgc:1719719639.344ENSGAFG00000010268polr3d9040.111Gambusia_affinis
ENSSFOG00015011547zgc:1719719147.214ENSGAFG00000009259zgc:1719718347.214Gambusia_affinis
ENSSFOG00015011547zgc:1719719640.720ENSGACG00000011126polr3d8941.944Gasterosteus_aculeatus
ENSSFOG00015011547zgc:1719719151.884ENSGACG00000015436zgc:1719718452.464Gasterosteus_aculeatus
ENSSFOG00015011547zgc:1719719745.455ENSGAGG00000023229POLR3D9044.504Gopherus_agassizii
ENSSFOG00015011547zgc:1719719745.528ENSGGOG00000007302POLR3D9044.772Gorilla_gorilla
ENSSFOG00015011547zgc:1719719639.452ENSHBUG00000012288polr3d8940.548Haplochromis_burtoni
ENSSFOG00015011547zgc:1719719453.846ENSHBUG00000020493zgc:1719719455.723Haplochromis_burtoni
ENSSFOG00015011547zgc:1719719744.744ENSHGLG00000015415POLR3D9044.744Heterocephalus_glaber_female
ENSSFOG00015011547zgc:1719719744.744ENSHGLG00100014950POLR3D9044.744Heterocephalus_glaber_male
ENSSFOG00015011547zgc:1719718646.984ENSHCOG00000018819-9044.868Hippocampus_comes
ENSSFOG00015011547zgc:1719719641.081ENSHCOG00000002228polr3d9041.257Hippocampus_comes
ENSSFOG00015011547zgc:1719719040.401ENSIPUG00000003480polr3d9139.837Ictalurus_punctatus
ENSSFOG00015011547zgc:1719719162.462ENSIPUG00000008608zgc:1719718361.846Ictalurus_punctatus
ENSSFOG00015011547zgc:1719719744.837ENSSTOG00000016519POLR3D9045.380Ictidomys_tridecemlineatus
ENSSFOG00015011547zgc:1719719744.324ENSJJAG00000006743Polr3d9044.772Jaculus_jaculus
ENSSFOG00015011547zgc:1719719640.169ENSKMAG00000005145polr3d9040.169Kryptolebias_marmoratus
ENSSFOG00015011547zgc:1719719040.419ENSLBEG00000003430polr3d8940.563Labrus_bergylta
ENSSFOG00015011547zgc:1719719654.108ENSLBEG00000009545zgc:1719718654.108Labrus_bergylta
ENSSFOG00015011547zgc:1719719645.135ENSLACG00000016654POLR3D9046.612Latimeria_chalumnae
ENSSFOG00015011547zgc:1719719641.304ENSLOCG00000016080polr3d9142.234Lepisosteus_oculatus
ENSSFOG00015011547zgc:1719719467.365ENSLOCG00000006467zgc:1719719967.365Lepisosteus_oculatus
ENSSFOG00015011547zgc:1719719745.528ENSLAFG00000001562POLR3D9046.092Loxodonta_africana
ENSSFOG00015011547zgc:1719719745.652ENSMFAG00000029141POLR3D9045.283Macaca_fascicularis
ENSSFOG00015011547zgc:1719719744.624ENSMMUG00000023226POLR3D9044.624Macaca_mulatta
ENSSFOG00015011547zgc:1719719745.652ENSMNEG00000039410POLR3D9045.283Macaca_nemestrina
ENSSFOG00015011547zgc:1719719745.652ENSMLEG00000031413POLR3D9045.283Mandrillus_leucophaeus
ENSSFOG00015011547zgc:1719719051.170ENSMAMG00000020617zgc:1719718351.020Mastacembelus_armatus
ENSSFOG00015011547zgc:1719719640.503ENSMAMG00000008914polr3d8940.282Mastacembelus_armatus
ENSSFOG00015011547zgc:1719719639.452ENSMZEG00005011442polr3d8940.548Maylandia_zebra
ENSSFOG00015011547zgc:1719719154.519ENSMZEG00005003175zgc:1719718753.203Maylandia_zebra
ENSSFOG00015011547zgc:1719719745.405ENSMAUG00000006844Polr3d9044.504Mesocricetus_auratus
ENSSFOG00015011547zgc:1719719745.799ENSMICG00000001049POLR3D9045.553Microcebus_murinus
ENSSFOG00015011547zgc:1719719744.624ENSMOCG00000005195Polr3d9044.624Microtus_ochrogaster
ENSSFOG00015011547zgc:1719719640.456ENSMMOG00000013845polr3d8941.595Mola_mola
ENSSFOG00015011547zgc:1719719942.440ENSMODG00000009491POLR3D9443.164Monodelphis_domestica
ENSSFOG00015011547zgc:1719719040.476ENSMALG00000002928polr3d8940.113Monopterus_albus
ENSSFOG00015011547zgc:1719719649.721ENSMALG00000005659zgc:1719718649.162Monopterus_albus
ENSSFOG00015011547zgc:1719719745.257MGP_CAROLIEiJ_G0019481Polr3d9045.283Mus_caroli
ENSSFOG00015011547zgc:1719719745.257ENSMUSG00000000776Polr3d9045.283Mus_musculus
ENSSFOG00015011547zgc:1719719042.898MGP_PahariEiJ_G0030498Polr3d7745.724Mus_pahari
ENSSFOG00015011547zgc:1719719745.135MGP_SPRETEiJ_G0020373Polr3d9045.553Mus_spretus
ENSSFOG00015011547zgc:1719719744.986ENSMPUG00000003653POLR3D9044.744Mustela_putorius_furo
ENSSFOG00015011547zgc:1719719745.799ENSMLUG00000002109POLR3D9045.576Myotis_lucifugus
ENSSFOG00015011547zgc:1719719744.236ENSNGAG00000013872Polr3d9344.771Nannospalax_galili
ENSSFOG00015011547zgc:1719717850.000ENSNBRG00000022951zgc:1719717450.709Neolamprologus_brichardi
ENSSFOG00015011547zgc:1719719641.011ENSNBRG00000019106polr3d9040.556Neolamprologus_brichardi
ENSSFOG00015011547zgc:1719719745.161ENSMEUG00000000465POLR3D9045.553Notamacropus_eugenii
ENSSFOG00015011547zgc:1719719745.257ENSOPRG00000013146POLR3D9045.799Ochotona_princeps
ENSSFOG00015011547zgc:1719719744.000ENSODEG00000005884POLR3D9043.536Octodon_degus
ENSSFOG00015011547zgc:1719719154.464ENSONIG00000007280zgc:1719718753.056Oreochromis_niloticus
ENSSFOG00015011547zgc:1719719639.452ENSONIG00000010634polr3d8940.327Oreochromis_niloticus
ENSSFOG00015011547zgc:1719719743.467ENSOANG00000010776POLR3D9244.652Ornithorhynchus_anatinus
ENSSFOG00015011547zgc:1719719745.455ENSOCUG00000017410POLR3D9045.455Oryctolagus_cuniculus
ENSSFOG00015011547zgc:1719719640.678ENSORLG00000011583polr3d9142.254Oryzias_latipes
ENSSFOG00015011547zgc:1719719640.282ENSORLG00020005668polr3d8941.854Oryzias_latipes_hni
ENSSFOG00015011547zgc:1719719639.888ENSORLG00015020291polr3d8939.496Oryzias_latipes_hsok
ENSSFOG00015011547zgc:1719719639.776ENSOMEG00000010120polr3d8941.854Oryzias_melastigma
ENSSFOG00015011547zgc:1719719745.257ENSOGAG00000004912POLR3D9045.135Otolemur_garnettii
ENSSFOG00015011547zgc:1719717735.018ENSOARG00000009142-9835.018Ovis_aries
ENSSFOG00015011547zgc:1719719943.832ENSOARG00000010372-7343.832Ovis_aries
ENSSFOG00015011547zgc:1719719745.528ENSPPAG00000029591POLR3D9044.772Pan_paniscus
ENSSFOG00015011547zgc:1719719744.236ENSPPRG00000022827POLR3D9044.772Panthera_pardus
ENSSFOG00015011547zgc:1719719744.236ENSPTIG00000018239POLR3D9044.236Panthera_tigris_altaica
ENSSFOG00015011547zgc:1719719745.528ENSPTRG00000020056POLR3D9044.772Pan_troglodytes
ENSSFOG00015011547zgc:1719719745.652ENSPANG00000009440POLR3D9045.283Papio_anubis
ENSSFOG00015011547zgc:1719719642.049ENSPKIG00000006727polr3d9040.811Paramormyrops_kingsleyae
ENSSFOG00015011547zgc:1719719275.301ENSPKIG00000025283zgc:1719718475.301Paramormyrops_kingsleyae
ENSSFOG00015011547zgc:1719719743.048ENSPSIG00000006113POLR3D9042.400Pelodiscus_sinensis
ENSSFOG00015011547zgc:1719719043.769ENSPMGG00000021658polr3d8943.228Periophthalmus_magnuspinnatus
ENSSFOG00015011547zgc:1719719744.504ENSPEMG00000023314Polr3d9044.772Peromyscus_maniculatus_bairdii
ENSSFOG00015011547zgc:1719719140.984ENSPMAG00000001455polr3d9040.657Petromyzon_marinus
ENSSFOG00015011547zgc:1719719744.687ENSPCIG00000012699POLR3D9044.809Phascolarctos_cinereus
ENSSFOG00015011547zgc:1719719147.840ENSPFOG00000011089zgc:1719718347.561Poecilia_formosa
ENSSFOG00015011547zgc:1719719640.000ENSPFOG00000012698polr3d9041.408Poecilia_formosa
ENSSFOG00015011547zgc:1719719142.121ENSPLAG00000003645zgc:1719716941.489Poecilia_latipinna
ENSSFOG00015011547zgc:1719719639.718ENSPLAG00000008149polr3d9041.737Poecilia_latipinna
ENSSFOG00015011547zgc:1719719639.888ENSPMEG00000002702polr3d9039.888Poecilia_mexicana
ENSSFOG00015011547zgc:1719719147.531ENSPMEG00000016953zgc:1719718347.256Poecilia_mexicana
ENSSFOG00015011547zgc:1719719639.607ENSPREG00000007593polr3d8939.607Poecilia_reticulata
ENSSFOG00015011547zgc:1719719146.341ENSPREG00000003755-8346.341Poecilia_reticulata
ENSSFOG00015011547zgc:1719719745.799ENSPPYG00000018419POLR3D9045.799Pongo_abelii
ENSSFOG00015011547zgc:1719717845.667ENSPCAG00000001971POLR3D7546.000Procavia_capensis
ENSSFOG00015011547zgc:1719719745.799ENSPCOG00000028134POLR3D9045.553Propithecus_coquereli
ENSSFOG00015011547zgc:1719719745.013ENSPVAG00000009873POLR3D9045.553Pteropus_vampyrus
ENSSFOG00015011547zgc:1719719639.178ENSPNYG00000016306polr3d8940.274Pundamilia_nyererei
ENSSFOG00015011547zgc:1719717952.055ENSPNYG00000008902zgc:1719717452.055Pundamilia_nyererei
ENSSFOG00015011547zgc:1719719463.393ENSPNAG00000018934zgc:1719718662.798Pygocentrus_nattereri
ENSSFOG00015011547zgc:1719719041.860ENSPNAG00000022324polr3d9041.370Pygocentrus_nattereri
ENSSFOG00015011547zgc:1719719745.528ENSRNOG00000010028Polr3d9045.553Rattus_norvegicus
ENSSFOG00015011547zgc:1719719745.652ENSRBIG00000035406POLR3D9045.652Rhinopithecus_bieti
ENSSFOG00015011547zgc:1719719745.652ENSRROG00000037278POLR3D9045.652Rhinopithecus_roxellana
ENSSFOG00015011547zgc:1719719745.528ENSSBOG00000024956POLR3D9045.161Saimiri_boliviensis_boliviensis
ENSSFOG00015011547zgc:1719719146.243ENSSHAG00000018257POLR3D9946.667Sarcophilus_harrisii
ENSSFOG00015011547zgc:1719719752.113ENSSMAG00000001465zgc:1719718651.549Scophthalmus_maximus
ENSSFOG00015011547zgc:1719719640.669ENSSMAG00000006271polr3d8940.845Scophthalmus_maximus
ENSSFOG00015011547zgc:1719719154.328ENSSDUG00000016019zgc:1719718254.006Seriola_dumerili
ENSSFOG00015011547zgc:1719719640.169ENSSDUG00000020718polr3d8942.535Seriola_dumerili
ENSSFOG00015011547zgc:1719719640.449ENSSLDG00000009643polr3d8942.535Seriola_lalandi_dorsalis
ENSSFOG00015011547zgc:1719719154.328ENSSLDG00000015968zgc:1719718253.869Seriola_lalandi_dorsalis
ENSSFOG00015011547zgc:1719717847.020ENSSARG00000012844POLR3D7547.697Sorex_araneus
ENSSFOG00015011547zgc:1719719646.154ENSSPUG00000000719POLR3D8944.536Sphenodon_punctatus
ENSSFOG00015011547zgc:1719719056.380ENSSPAG00000010384zgc:1719719156.380Stegastes_partitus
ENSSFOG00015011547zgc:1719719639.833ENSSPAG00000023326polr3d9041.690Stegastes_partitus
ENSSFOG00015011547zgc:1719719745.109ENSSSCG00000009622POLR3D9045.232Sus_scrofa
ENSSFOG00015011547zgc:1719719639.496ENSTRUG00000003555polr3d8940.169Takifugu_rubripes
ENSSFOG00015011547zgc:1719719638.483ENSTNIG00000006282polr3d9040.449Tetraodon_nigroviridis
ENSSFOG00015011547zgc:1719719745.232ENSTTRG00000012745POLR3D9045.504Tursiops_truncatus
ENSSFOG00015011547zgc:1719718643.161ENSUAMG00000026868POLR3D8743.807Ursus_americanus
ENSSFOG00015011547zgc:1719719745.822ENSUMAG00000005099POLR3D9046.361Ursus_maritimus
ENSSFOG00015011547zgc:1719719744.595ENSVVUG00000005290POLR3D9045.013Vulpes_vulpes
ENSSFOG00015011547zgc:1719719643.052ENSXETG00000010534polr3d9142.779Xenopus_tropicalis
ENSSFOG00015011547zgc:1719719041.641ENSXCOG00000015872polr3d8940.793Xiphophorus_couchianus
ENSSFOG00015011547zgc:1719719147.840ENSXMAG00000014555-8846.087Xiphophorus_maculatus
ENSSFOG00015011547zgc:1719719041.124ENSXMAG00000001872polr3d9040.111Xiphophorus_maculatus

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