EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015011566 (Gene tree)
Gene ID: -
Gene Symbol: gfi1b
Alias: si:ch211-231o6.2
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 8767 bases
Position: chrKV410817.1:464458-473224
Accession: 108922623
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015017968	zf-C2H2	PF00096.26	1.1e-17	1	4
ENSSFOP00015017968	zf-C2H2	PF00096.26	1.1e-17	2	4
ENSSFOP00015017968	zf-C2H2	PF00096.26	1.1e-17	3	4
ENSSFOP00015017968	zf-C2H2	PF00096.26	1.1e-17	4	4
ENSSFOP00015017972	zf-C2H2	PF00096.26	1.1e-17	1	4
ENSSFOP00015017972	zf-C2H2	PF00096.26	1.1e-17	2	4
ENSSFOP00015017972	zf-C2H2	PF00096.26	1.1e-17	3	4
ENSSFOP00015017972	zf-C2H2	PF00096.26	1.1e-17	4	4
ENSSFOP00015017977	zf-C2H2	PF00096.26	1.1e-17	1	4
ENSSFOP00015017977	zf-C2H2	PF00096.26	1.1e-17	2	4
ENSSFOP00015017977	zf-C2H2	PF00096.26	1.1e-17	3	4
ENSSFOP00015017977	zf-C2H2	PF00096.26	1.1e-17	4	4
ENSSFOP00015017981	zf-C2H2	PF00096.26	1.1e-17	1	4
ENSSFOP00015017981	zf-C2H2	PF00096.26	1.1e-17	2	4
ENSSFOP00015017981	zf-C2H2	PF00096.26	1.1e-17	3	4
ENSSFOP00015017981	zf-C2H2	PF00096.26	1.1e-17	4	4
ENSSFOP00015017968	zf-met	PF12874.7	9.2e-07	1	2
ENSSFOP00015017968	zf-met	PF12874.7	9.2e-07	2	2
ENSSFOP00015017972	zf-met	PF12874.7	9.2e-07	1	2
ENSSFOP00015017972	zf-met	PF12874.7	9.2e-07	2	2
ENSSFOP00015017977	zf-met	PF12874.7	9.2e-07	1	2
ENSSFOP00015017977	zf-met	PF12874.7	9.2e-07	2	2
ENSSFOP00015017981	zf-met	PF12874.7	9.2e-07	1	2
ENSSFOP00015017981	zf-met	PF12874.7	9.2e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015018187	-	1215	XM_018732850	ENSSFOP00015017981	312 (aa)	XP_018588366	-
ENSSFOT00015018178	-	1270	XM_018732851	ENSSFOP00015017972	312 (aa)	XP_018588367	-
ENSSFOT00015018183	-	1547	XM_018732848	ENSSFOP00015017977	312 (aa)	XP_018588364	-
ENSSFOT00015018174	-	1374	XM_018732847	ENSSFOP00015017968	312 (aa)	XP_018588363	-

Gene Model

Click here to download ENSSFOG00015011566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015011566's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015011566	gfi1b	58	42.857	ENSSFOG00015008577	-	96	42.857
ENSSFOG00015011566	gfi1b	57	40.517	ENSSFOG00015021831	-	64	40.517
ENSSFOG00015011566	gfi1b	90	36.396	ENSSFOG00015008114	-	67	44.444
ENSSFOG00015011566	gfi1b	74	42.105	ENSSFOG00015006108	-	64	42.105
ENSSFOG00015011566	gfi1b	54	41.304	ENSSFOG00015019818	-	72	41.304
ENSSFOG00015011566	gfi1b	56	45.536	ENSSFOG00015000652	ZNF775	87	45.536
ENSSFOG00015011566	gfi1b	89	40.541	ENSSFOG00015010829	-	81	40.541
ENSSFOG00015011566	gfi1b	54	44.706	ENSSFOG00015003121	znf668	78	44.706
ENSSFOG00015011566	gfi1b	55	40.541	ENSSFOG00015008994	znf236	53	40.541

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015011566	gfi1b	90	65.125	ENSAPOG00000001296	gfi1b	83	65.125	Acanthochromis_polyacanthus
ENSSFOG00015011566	gfi1b	90	57.500	ENSACIG00000002190	gfi1b	55	81.928	Amphilophus_citrinellus
ENSSFOG00015011566	gfi1b	90	63.929	ENSAOCG00000021187	gfi1b	83	63.929	Amphiprion_ocellaris
ENSSFOG00015011566	gfi1b	90	63.929	ENSAPEG00000016196	gfi1b	83	63.929	Amphiprion_percula
ENSSFOG00015011566	gfi1b	90	65.000	ENSATEG00000002534	gfi1b	83	65.000	Anabas_testudineus
ENSSFOG00015011566	gfi1b	90	55.709	ENSAPLG00000003373	GFI1B	83	55.709	Anas_platyrhynchos
ENSSFOG00015011566	gfi1b	90	61.429	ENSACLG00000027053	gfi1b	83	61.429	Astatotilapia_calliptera
ENSSFOG00015011566	gfi1b	90	66.784	ENSAMXG00000037544	GFI1B	83	66.784	Astyanax_mexicanus
ENSSFOG00015011566	gfi1b	90	53.873	ENSCAPG00000010404	GFI1B	83	53.873	Cavia_aperea
ENSSFOG00015011566	gfi1b	90	54.276	ENSCPBG00000021186	GFI1B	84	54.276	Chrysemys_picta_bellii
ENSSFOG00015011566	gfi1b	90	62.284	ENSCSEG00000001315	gfi1b	83	62.284	Cynoglossus_semilaevis
ENSSFOG00015011566	gfi1b	90	60.714	ENSCVAG00000017168	gfi1b	97	60.714	Cyprinodon_variegatus
ENSSFOG00015011566	gfi1b	90	64.789	ENSDARG00000079947	gfi1b	76	81.768	Danio_rerio
ENSSFOG00015011566	gfi1b	90	66.783	ENSELUG00000016933	gfi1b	83	66.783	Esox_lucius
ENSSFOG00015011566	gfi1b	90	49.387	ENSFALG00000001479	GFI1B	98	50.156	Ficedula_albicollis
ENSSFOG00015011566	gfi1b	90	64.413	ENSFHEG00000015138	gfi1b	83	64.413	Fundulus_heteroclitus
ENSSFOG00015011566	gfi1b	90	73.404	ENSGMOG00000019123	gfi1b	71	73.404	Gadus_morhua
ENSSFOG00015011566	gfi1b	90	54.949	ENSGALG00000003478	GFI1B	83	54.949	Gallus_gallus
ENSSFOG00015011566	gfi1b	57	79.213	ENSGAFG00000003059	gfi1b	76	79.213	Gambusia_affinis
ENSSFOG00015011566	gfi1b	90	57.929	ENSGACG00000018134	gfi1b	84	57.929	Gasterosteus_aculeatus
ENSSFOG00015011566	gfi1b	90	56.207	ENSGAGG00000021327	GFI1B	83	55.709	Gopherus_agassizii
ENSSFOG00015011566	gfi1b	90	61.429	ENSHBUG00000005451	gfi1b	83	61.429	Haplochromis_burtoni
ENSSFOG00015011566	gfi1b	90	62.143	ENSHCOG00000013713	gfi1b	82	61.922	Hippocampus_comes
ENSSFOG00015011566	gfi1b	90	68.085	ENSIPUG00000012769	gfi1b	83	68.085	Ictalurus_punctatus
ENSSFOG00015011566	gfi1b	89	48.765	ENSJJAG00000016355	Gfi1b	98	48.765	Jaculus_jaculus
ENSSFOG00015011566	gfi1b	90	61.972	ENSKMAG00000016047	gfi1b	83	61.972	Kryptolebias_marmoratus
ENSSFOG00015011566	gfi1b	90	63.475	ENSLBEG00000020297	gfi1b	82	63.475	Labrus_bergylta
ENSSFOG00015011566	gfi1b	90	51.890	ENSLACG00000012207	GFI1B	98	51.890	Latimeria_chalumnae
ENSSFOG00015011566	gfi1b	90	64.846	ENSLOCG00000005750	gfi1b	83	64.846	Lepisosteus_oculatus
ENSSFOG00015011566	gfi1b	91	52.431	ENSLAFG00000022367	GFI1B	60	64.000	Loxodonta_africana
ENSSFOG00015011566	gfi1b	90	65.714	ENSMAMG00000003040	gfi1b	97	62.278	Mastacembelus_armatus
ENSSFOG00015011566	gfi1b	90	61.429	ENSMZEG00005015594	gfi1b	83	61.429	Maylandia_zebra
ENSSFOG00015011566	gfi1b	90	55.290	ENSMGAG00000006129	GFI1B	83	55.290	Meleagris_gallopavo
ENSSFOG00015011566	gfi1b	90	63.345	ENSMMOG00000011764	gfi1b	83	63.345	Mola_mola
ENSSFOG00015011566	gfi1b	90	47.239	ENSMODG00000012600	GFI1B	98	47.239	Monodelphis_domestica
ENSSFOG00015011566	gfi1b	90	62.500	ENSMALG00000004034	gfi1b	83	62.500	Monopterus_albus
ENSSFOG00015011566	gfi1b	89	55.208	ENSNGAG00000003333	Gfi1b	98	49.533	Nannospalax_galili
ENSSFOG00015011566	gfi1b	90	61.566	ENSNBRG00000012391	gfi1b	83	61.566	Neolamprologus_brichardi
ENSSFOG00015011566	gfi1b	90	60.854	ENSONIG00000013011	gfi1b	96	77.931	Oreochromis_niloticus
ENSSFOG00015011566	gfi1b	90	53.846	ENSOANG00000014723	GFI1B	59	65.000	Ornithorhynchus_anatinus
ENSSFOG00015011566	gfi1b	90	61.268	ENSORLG00000014390	GFI1B	95	61.268	Oryzias_latipes
ENSSFOG00015011566	gfi1b	90	62.544	ENSORLG00020003719	GFI1B	83	62.544	Oryzias_latipes_hni
ENSSFOG00015011566	gfi1b	90	62.500	ENSORLG00015017142	gfi1b	83	62.500	Oryzias_latipes_hsok
ENSSFOG00015011566	gfi1b	90	61.429	ENSOMEG00000015149	GFI1B	83	61.429	Oryzias_melastigma
ENSSFOG00015011566	gfi1b	90	51.186	ENSOGAG00000008879	GFI1B	63	59.447	Otolemur_garnettii
ENSSFOG00015011566	gfi1b	90	70.567	ENSPKIG00000007643	gfi1b	83	70.567	Paramormyrops_kingsleyae
ENSSFOG00015011566	gfi1b	90	54.762	ENSPSIG00000012112	GFI1B	51	72.159	Pelodiscus_sinensis
ENSSFOG00015011566	gfi1b	90	55.903	ENSPMGG00000006021	gfi1b	60	74.603	Periophthalmus_magnuspinnatus
ENSSFOG00015011566	gfi1b	90	46.226	ENSPCIG00000019724	GFI1B	72	56.132	Phascolarctos_cinereus
ENSSFOG00015011566	gfi1b	90	65.000	ENSPFOG00000003460	gfi1b	94	57.399	Poecilia_formosa
ENSSFOG00015011566	gfi1b	90	65.000	ENSPLAG00000021960	GFI1B	83	65.000	Poecilia_latipinna
ENSSFOG00015011566	gfi1b	90	64.789	ENSPLAG00000017181	GFI1B	83	64.789	Poecilia_latipinna
ENSSFOG00015011566	gfi1b	90	64.643	ENSPMEG00000001556	GFI1B	83	64.643	Poecilia_mexicana
ENSSFOG00015011566	gfi1b	90	64.643	ENSPMEG00000019220	gfi1b	83	64.643	Poecilia_mexicana
ENSSFOG00015011566	gfi1b	90	64.286	ENSPREG00000021718	gfi1b	83	64.286	Poecilia_reticulata
ENSSFOG00015011566	gfi1b	90	59.643	ENSPNYG00000018422	gfi1b	74	65.560	Pundamilia_nyererei
ENSSFOG00015011566	gfi1b	90	68.794	ENSPNAG00000021118	gfi1b	83	68.794	Pygocentrus_nattereri
ENSSFOG00015011566	gfi1b	93	45.593	ENSSHAG00000006462	GFI1B	70	50.192	Sarcophilus_harrisii
ENSSFOG00015011566	gfi1b	90	63.571	ENSSMAG00000015181	gfi1b	90	63.669	Scophthalmus_maximus
ENSSFOG00015011566	gfi1b	90	65.000	ENSSDUG00000011604	gfi1b	83	65.000	Seriola_dumerili
ENSSFOG00015011566	gfi1b	90	64.643	ENSSLDG00000013823	gfi1b	83	64.643	Seriola_lalandi_dorsalis
ENSSFOG00015011566	gfi1b	90	43.813	ENSSPUG00000016039	GFI1B	98	43.813	Sphenodon_punctatus
ENSSFOG00015011566	gfi1b	90	65.357	ENSSPAG00000022914	gfi1b	83	65.000	Stegastes_partitus
ENSSFOG00015011566	gfi1b	51	98.276	ENSTGUG00000005282	-	99	98.276	Taeniopygia_guttata
ENSSFOG00015011566	gfi1b	55	57.627	ENSTGUG00000015953	-	61	57.627	Taeniopygia_guttata
ENSSFOG00015011566	gfi1b	90	58.763	ENSTRUG00000004525	gfi1b	83	58.763	Takifugu_rubripes
ENSSFOG00015011566	gfi1b	90	59.310	ENSTNIG00000003834	gfi1b	83	59.310	Tetraodon_nigroviridis
ENSSFOG00015011566	gfi1b	87	43.534	ENSTBEG00000014459	GFI1B	81	43.534	Tupaia_belangeri
ENSSFOG00015011566	gfi1b	90	50.171	ENSXETG00000006263	gfi1b	83	50.853	Xenopus_tropicalis
ENSSFOG00015011566	gfi1b	90	64.643	ENSXMAG00000027589	gfi1b	80	68.050	Xiphophorus_maculatus