EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015011731 (Gene tree)
Gene ID: 108928889
Gene Symbol: zic3
Alias: -
Full Name: Zic family member 3
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 2343 bases
Position: chrKV410894.1:688938-691280
Accession: 108928889
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015018267	zf-C2H2	PF00096.26	6e-22	1	4
ENSSFOP00015018267	zf-C2H2	PF00096.26	6e-22	2	4
ENSSFOP00015018267	zf-C2H2	PF00096.26	6e-22	3	4
ENSSFOP00015018267	zf-C2H2	PF00096.26	6e-22	4	4
ENSSFOP00015018267	zf-met	PF12874.7	0.00058	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015018477	-	1350	XM_018743086	ENSSFOP00015018267	449 (aa)	XP_018598602	A0A1W4Z493

Gene Model

Click here to download ENSSFOG00015011731's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015011731's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015011731	zic3	100	77.728	ENSSFOG00015008079	zic3	100	77.728

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015011731	zic3	100	74.304	ENSG00000156925	ZIC3	99	74.304	Homo_sapiens
ENSSFOG00015011731	zic3	100	74.518	ENSANAG00000019614	ZIC3	99	74.518	Aotus_nancymaae
ENSSFOG00015011731	zic3	100	74.518	ENSCJAG00000013792	ZIC3	99	74.518	Callithrix_jacchus
ENSSFOG00015011731	zic3	100	75.322	ENSCAFG00000018979	ZIC3	99	75.322	Canis_familiaris
ENSSFOG00015011731	zic3	100	72.163	ENSTSYG00000003356	ZIC3	99	72.163	Carlito_syrichta
ENSSFOG00015011731	zic3	55	85.425	ENSCPOG00000002374	ZIC3	100	85.425	Cavia_porcellus
ENSSFOG00015011731	zic3	100	74.518	ENSCCAG00000025983	ZIC3	99	74.518	Cebus_capucinus
ENSSFOG00015011731	zic3	100	74.893	ENSCATG00000036569	ZIC3	99	74.893	Cercocebus_atys
ENSSFOG00015011731	zic3	100	74.678	ENSCLAG00000001934	ZIC3	99	74.678	Chinchilla_lanigera
ENSSFOG00015011731	zic3	93	76.761	ENSCPBG00000026115	ZIC3	100	78.505	Chrysemys_picta_bellii
ENSSFOG00015011731	zic3	100	74.893	ENSCANG00000017505	ZIC3	99	74.893	Colobus_angolensis_palliatus
ENSSFOG00015011731	zic3	100	74.678	ENSCGRG00001024527	Zic3	99	74.678	Cricetulus_griseus_chok1gshd
ENSSFOG00015011731	zic3	100	74.464	ENSDORG00000025481	Zic3	99	74.464	Dipodomys_ordii
ENSSFOG00015011731	zic3	100	75.322	ENSFCAG00000025684	ZIC3	99	75.322	Felis_catus
ENSSFOG00015011731	zic3	82	78.016	ENSFDAG00000014929	ZIC3	100	85.830	Fukomys_damarensis
ENSSFOG00015011731	zic3	92	73.427	ENSGAGG00000004149	ZIC3	92	75.174	Gopherus_agassizii
ENSSFOG00015011731	zic3	100	74.678	ENSGGOG00000011914	ZIC3	99	74.678	Gorilla_gorilla
ENSSFOG00015011731	zic3	100	75.107	ENSHGLG00000006298	ZIC3	99	75.107	Heterocephalus_glaber_female
ENSSFOG00015011731	zic3	70	53.016	ENSHGLG00100002829	ZIC3	99	61.905	Heterocephalus_glaber_male
ENSSFOG00015011731	zic3	100	74.678	ENSJJAG00000022714	Zic3	99	74.678	Jaculus_jaculus
ENSSFOG00015011731	zic3	100	78.619	ENSLACG00000014597	ZIC3	99	78.619	Latimeria_chalumnae
ENSSFOG00015011731	zic3	89	74.029	ENSLAFG00000007048	ZIC3	100	75.888	Loxodonta_africana
ENSSFOG00015011731	zic3	100	74.893	ENSMFAG00000027018	ZIC3	99	74.893	Macaca_fascicularis
ENSSFOG00015011731	zic3	87	75.430	ENSMMUG00000002023	ZIC3	89	75.430	Macaca_mulatta
ENSSFOG00015011731	zic3	100	74.893	ENSMNEG00000040682	ZIC3	99	74.893	Macaca_nemestrina
ENSSFOG00015011731	zic3	100	74.893	ENSMLEG00000004378	ZIC3	99	74.893	Mandrillus_leucophaeus
ENSSFOG00015011731	zic3	100	74.678	ENSMAUG00000009402	Zic3	99	74.678	Mesocricetus_auratus
ENSSFOG00015011731	zic3	100	74.304	ENSMICG00000042529	ZIC3	99	74.304	Microcebus_murinus
ENSSFOG00015011731	zic3	100	74.624	ENSMOCG00000020544	Zic3	99	74.624	Microtus_ochrogaster
ENSSFOG00015011731	zic3	100	74.464	MGP_CAROLIEiJ_G0033101	Zic3	100	85.425	Mus_caroli
ENSSFOG00015011731	zic3	100	74.464	ENSMUSG00000067860	Zic3	100	85.425	Mus_musculus
ENSSFOG00015011731	zic3	100	74.464	MGP_PahariEiJ_G0031644	Zic3	100	85.425	Mus_pahari
ENSSFOG00015011731	zic3	100	74.464	MGP_SPRETEiJ_G0034256	Zic3	100	85.425	Mus_spretus
ENSSFOG00015011731	zic3	100	74.464	ENSNGAG00000023346	Zic3	99	74.464	Nannospalax_galili
ENSSFOG00015011731	zic3	98	68.478	ENSNLEG00000003005	-	99	68.478	Nomascus_leucogenys
ENSSFOG00015011731	zic3	100	74.893	ENSODEG00000005556	ZIC3	99	74.893	Octodon_degus
ENSSFOG00015011731	zic3	100	74.678	ENSPPAG00000030013	ZIC3	99	74.678	Pan_paniscus
ENSSFOG00015011731	zic3	100	74.946	ENSPPRG00000010839	ZIC3	99	74.946	Panthera_pardus
ENSSFOG00015011731	zic3	100	74.678	ENSPTRG00000043849	ZIC3	99	74.678	Pan_troglodytes
ENSSFOG00015011731	zic3	100	74.893	ENSPANG00000011357	ZIC3	99	74.893	Papio_anubis
ENSSFOG00015011731	zic3	100	84.187	ENSPKIG00000017705	zic3	99	84.187	Paramormyrops_kingsleyae
ENSSFOG00015011731	zic3	65	82.594	ENSPSIG00000011896	ZIC3	99	82.594	Pelodiscus_sinensis
ENSSFOG00015011731	zic3	100	74.678	ENSPEMG00000022168	Zic3	99	74.678	Peromyscus_maniculatus_bairdii
ENSSFOG00015011731	zic3	100	75.107	ENSPCOG00000021557	ZIC3	99	75.107	Propithecus_coquereli
ENSSFOG00015011731	zic3	100	74.034	ENSRNOG00000000861	Zic3	99	74.034	Rattus_norvegicus
ENSSFOG00015011731	zic3	100	74.893	ENSRBIG00000030660	ZIC3	99	74.893	Rhinopithecus_bieti
ENSSFOG00015011731	zic3	100	74.893	ENSRROG00000028410	ZIC3	99	74.893	Rhinopithecus_roxellana
ENSSFOG00015011731	zic3	100	74.732	ENSSBOG00000024684	ZIC3	99	74.732	Saimiri_boliviensis_boliviensis
ENSSFOG00015011731	zic3	85	75.773	ENSTGUG00000002155	ZIC3	99	77.949	Taeniopygia_guttata
ENSSFOG00015011731	zic3	100	75.322	ENSVVUG00000021378	ZIC3	99	75.322	Vulpes_vulpes
ENSSFOG00015011731	zic3	100	76.053	ENSXETG00000024458	zic3	99	76.053	Xenopus_tropicalis