EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015011749 (Gene tree)
Gene ID: 108928871
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein X-linked
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 2889 bases
Position: chrKV410894.1:763133-766021
Accession: 108928871
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015018314	RBM1CTR	PF08081.11	2.6e-18	1	1
ENSSFOP00015018314	RRM_1	PF00076.22	4.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015018524	-	1149	XM_018743059	ENSSFOP00015018314	382 (aa)	XP_018598575	-

Gene Model

Click here to download ENSSFOG00015011749's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015011749's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015011749	-	100	76.031	ENSSFOG00015008229	rbmx	100	81.234

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015011749	-	94	78.862	ENSAPOG00000006496	rbmx	93	80.055	Acanthochromis_polyacanthus
ENSSFOG00015011749	-	93	75.346	ENSACIG00000011576	rbmx	93	80.220	Amphilophus_citrinellus
ENSSFOG00015011749	-	84	71.045	ENSACIG00000011598	rbmx	85	76.716	Amphilophus_citrinellus
ENSSFOG00015011749	-	93	74.114	ENSAOCG00000020930	rbmx	93	79.564	Amphiprion_ocellaris
ENSSFOG00015011749	-	100	73.858	ENSAPEG00000007316	rbmx	94	79.564	Amphiprion_percula
ENSSFOG00015011749	-	93	75.278	ENSATEG00000017363	rbmx	93	80.441	Anabas_testudineus
ENSSFOG00015011749	-	100	74.365	ENSACLG00000000098	rbmx	93	80.381	Astatotilapia_calliptera
ENSSFOG00015011749	-	93	77.869	ENSAMXG00000019990	rbmx	93	79.558	Astyanax_mexicanus
ENSSFOG00015011749	-	93	74.590	ENSCSEG00000005240	rbmx	93	79.781	Cynoglossus_semilaevis
ENSSFOG00015011749	-	93	77.747	ENSCVAG00000008876	rbmx	94	79.396	Cyprinodon_variegatus
ENSSFOG00015011749	-	94	75.410	ENSDARG00000014244	rbmx	100	78.092	Danio_rerio
ENSSFOG00015011749	-	96	53.728	ENSEBUG00000006778	rbmx	99	55.986	Eptatretus_burgeri
ENSSFOG00015011749	-	94	79.301	ENSELUG00000003600	rbmx	100	80.000	Esox_lucius
ENSSFOG00015011749	-	93	77.747	ENSFHEG00000016764	rbmx	94	79.945	Fundulus_heteroclitus
ENSSFOG00015011749	-	100	75.758	ENSGMOG00000004496	rbmx	93	76.423	Gadus_morhua
ENSSFOG00015011749	-	93	78.512	ENSGAFG00000019917	rbmx	93	80.165	Gambusia_affinis
ENSSFOG00015011749	-	93	72.432	ENSGACG00000017237	rbmx	93	77.297	Gasterosteus_aculeatus
ENSSFOG00015011749	-	100	74.873	ENSHBUG00000015283	rbmx	93	80.654	Haplochromis_burtoni
ENSSFOG00015011749	-	93	70.461	ENSHCOG00000001111	rbmx	100	72.852	Hippocampus_comes
ENSSFOG00015011749	-	100	70.408	ENSIPUG00000022212	rbmx	93	75.414	Ictalurus_punctatus
ENSSFOG00015011749	-	93	76.648	ENSKMAG00000001754	rbmx	100	76.573	Kryptolebias_marmoratus
ENSSFOG00015011749	-	93	76.584	ENSLBEG00000010000	rbmx	93	79.339	Labrus_bergylta
ENSSFOG00015011749	-	93	69.293	ENSLACG00000015261	rbmx	93	70.461	Latimeria_chalumnae
ENSSFOG00015011749	-	100	78.803	ENSLOCG00000015142	rbmx	100	80.299	Lepisosteus_oculatus
ENSSFOG00015011749	-	93	74.932	ENSMAMG00000020591	rbmx	93	79.837	Mastacembelus_armatus
ENSSFOG00015011749	-	90	74.648	ENSMZEG00005006432	rbmx	87	80.563	Maylandia_zebra
ENSSFOG00015011749	-	93	78.082	ENSMMOG00000001043	rbmx	93	79.178	Mola_mola
ENSSFOG00015011749	-	93	68.033	ENSMALG00000009777	rbmx	93	73.224	Monopterus_albus
ENSSFOG00015011749	-	100	75.127	ENSNBRG00000022154	rbmx	93	80.654	Neolamprologus_brichardi
ENSSFOG00015011749	-	100	74.177	ENSONIG00000002700	rbmx	93	80.163	Oreochromis_niloticus
ENSSFOG00015011749	-	100	76.142	ENSORLG00000001692	rbmx	93	77.929	Oryzias_latipes
ENSSFOG00015011749	-	100	76.396	ENSORLG00020021132	rbmx	93	78.202	Oryzias_latipes_hni
ENSSFOG00015011749	-	100	75.888	ENSORLG00015000330	rbmx	93	77.929	Oryzias_latipes_hsok
ENSSFOG00015011749	-	100	72.081	ENSOMEG00000016787	rbmx	100	77.509	Oryzias_melastigma
ENSSFOG00015011749	-	100	69.845	ENSPKIG00000017611	rbmx	93	72.099	Paramormyrops_kingsleyae
ENSSFOG00015011749	-	100	82.990	ENSPKIG00000024910	-	100	84.536	Paramormyrops_kingsleyae
ENSSFOG00015011749	-	90	74.499	ENSPMGG00000017906	rbmx	93	77.337	Periophthalmus_magnuspinnatus
ENSSFOG00015011749	-	93	78.512	ENSPFOG00000013193	rbmx	93	80.165	Poecilia_formosa
ENSSFOG00015011749	-	93	78.788	ENSPLAG00000010472	rbmx	93	80.441	Poecilia_latipinna
ENSSFOG00015011749	-	93	78.512	ENSPMEG00000007579	rbmx	93	80.165	Poecilia_mexicana
ENSSFOG00015011749	-	93	78.237	ENSPREG00000010279	rbmx	93	79.890	Poecilia_reticulata
ENSSFOG00015011749	-	100	74.873	ENSPNYG00000012536	rbmx	93	80.654	Pundamilia_nyererei
ENSSFOG00015011749	-	93	77.384	ENSPNAG00000019648	rbmx	93	79.063	Pygocentrus_nattereri
ENSSFOG00015011749	-	93	75.616	ENSSMAG00000014636	rbmx	93	78.630	Scophthalmus_maximus
ENSSFOG00015011749	-	93	74.932	ENSSDUG00000000242	rbmx	93	80.109	Seriola_dumerili
ENSSFOG00015011749	-	93	74.659	ENSSLDG00000021381	rbmx	93	80.109	Seriola_lalandi_dorsalis
ENSSFOG00015011749	-	94	74.124	ENSSPAG00000008582	rbmx	93	79.292	Stegastes_partitus
ENSSFOG00015011749	-	94	75.339	ENSTRUG00000006031	rbmx	93	78.356	Takifugu_rubripes
ENSSFOG00015011749	-	93	73.407	ENSTNIG00000016844	rbmx	93	78.512	Tetraodon_nigroviridis
ENSSFOG00015011749	-	65	55.985	ENSUAMG00000011752	-	87	55.603	Ursus_americanus
ENSSFOG00015011749	-	65	56.371	ENSUMAG00000019276	-	87	56.034	Ursus_maritimus
ENSSFOG00015011749	-	93	51.622	ENSXETG00000003481	rbmx	93	51.892	Xenopus_tropicalis
ENSSFOG00015011749	-	91	72.316	ENSXCOG00000016084	rbmx	92	73.446	Xiphophorus_couchianus
ENSSFOG00015011749	-	93	78.237	ENSXMAG00000013407	rbmx	93	79.890	Xiphophorus_maculatus