EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015012168 (Gene tree)
Gene ID: -
Gene Symbol: msi2b
Alias: -
Full Name: musashi RNA-binding protein 2b
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 216016 bases
Position: chrKV410993.1:4257033-4473048
Accession: ZDB-GENE-040426-1268
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015018947	RRM_1	PF00076.22	8.8e-22	1	2
ENSSFOP00015018947	RRM_1	PF00076.22	8.8e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015019163	-	1161	-	ENSSFOP00015018947	386 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015012168's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015012168's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015012168	msi2b	92	84.834	ENSSFOG00015021687	-	97	84.834
ENSSFOG00015012168	msi2b	92	51.482	ENSSFOG00015014964	-	90	67.299
ENSSFOG00015012168	msi2b	92	51.070	ENSSFOG00015005350	MSI1	99	51.862

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015012168	msi2b	74	87.204	ENSG00000153944	MSI2	91	97.101	Homo_sapiens
ENSSFOG00015012168	msi2b	100	68.998	ENSAPOG00000001658	msi2a	100	83.673	Acanthochromis_polyacanthus
ENSSFOG00015012168	msi2b	74	87.204	ENSAMEG00000002697	MSI2	99	63.859	Ailuropoda_melanoleuca
ENSSFOG00015012168	msi2b	100	71.852	ENSACIG00000009475	msi2a	100	71.852	Amphilophus_citrinellus
ENSSFOG00015012168	msi2b	80	83.673	ENSAPEG00000007706	msi2a	95	83.471	Amphiprion_percula
ENSSFOG00015012168	msi2b	100	68.998	ENSATEG00000010498	msi2a	100	83.673	Anabas_testudineus
ENSSFOG00015012168	msi2b	63	90.710	ENSATEG00000003301	-	94	90.710	Anabas_testudineus
ENSSFOG00015012168	msi2b	87	72.034	ENSACAG00000005452	MSI2	88	72.034	Anolis_carolinensis
ENSSFOG00015012168	msi2b	76	82.449	ENSANAG00000037827	MSI2	96	82.449	Aotus_nancymaae
ENSSFOG00015012168	msi2b	100	68.531	ENSACLG00000007752	msi2a	100	83.265	Astatotilapia_calliptera
ENSSFOG00015012168	msi2b	100	72.794	ENSAMXG00000010474	msi2b	95	85.537	Astyanax_mexicanus
ENSSFOG00015012168	msi2b	100	73.594	ENSAMXG00000032796	msi2a	95	86.611	Astyanax_mexicanus
ENSSFOG00015012168	msi2b	68	87.204	ENSBTAG00000004406	MSI2	92	87.204	Bos_taurus
ENSSFOG00015012168	msi2b	56	50.204	WBGene00003423	msi-1	76	50.204	Caenorhabditis_elegans
ENSSFOG00015012168	msi2b	76	82.449	ENSCJAG00000013998	MSI2	96	82.449	Callithrix_jacchus
ENSSFOG00015012168	msi2b	73	87.019	ENSCAFG00020025620	MSI2	71	85.714	Canis_lupus_dingo
ENSSFOG00015012168	msi2b	76	80.816	ENSCHIG00000016580	MSI2	96	80.816	Capra_hircus
ENSSFOG00015012168	msi2b	63	90.164	ENSCPOG00000034042	MSI2	89	90.164	Cavia_porcellus
ENSSFOG00015012168	msi2b	76	82.449	ENSCCAG00000033927	MSI2	96	82.449	Cebus_capucinus
ENSSFOG00015012168	msi2b	74	82.906	ENSCATG00000040879	MSI2	91	87.143	Cercocebus_atys
ENSSFOG00015012168	msi2b	82	82.449	ENSCLAG00000014325	MSI2	100	62.935	Chinchilla_lanigera
ENSSFOG00015012168	msi2b	76	82.449	ENSCSAG00000005633	MSI2	96	82.449	Chlorocebus_sabaeus
ENSSFOG00015012168	msi2b	100	69.192	ENSCPBG00000009942	MSI2	95	91.209	Chrysemys_picta_bellii
ENSSFOG00015012168	msi2b	74	87.204	ENSCANG00000036414	MSI2	91	87.143	Colobus_angolensis_palliatus
ENSSFOG00015012168	msi2b	76	82.041	ENSCGRG00001013330	Msi2	96	82.041	Cricetulus_griseus_chok1gshd
ENSSFOG00015012168	msi2b	74	87.204	ENSCGRG00000003141	Msi2	100	63.957	Cricetulus_griseus_crigri
ENSSFOG00015012168	msi2b	100	76.446	ENSCSEG00000003266	-	100	76.446	Cynoglossus_semilaevis
ENSSFOG00015012168	msi2b	51	81.081	ENSCSEG00000013557	msi2a	83	81.081	Cynoglossus_semilaevis
ENSSFOG00015012168	msi2b	100	72.304	ENSCVAG00000017075	msi2a	100	83.673	Cyprinodon_variegatus
ENSSFOG00015012168	msi2b	100	67.647	ENSDARG00000033901	msi2a	100	67.647	Danio_rerio
ENSSFOG00015012168	msi2b	100	69.860	ENSDARG00000032614	msi2b	98	100.000	Danio_rerio
ENSSFOG00015012168	msi2b	67	86.829	ENSDNOG00000014501	MSI2	95	86.829	Dasypus_novemcinctus
ENSSFOG00015012168	msi2b	56	57.741	FBgn0260943	Rbp6	88	66.667	Drosophila_melanogaster
ENSSFOG00015012168	msi2b	80	54.799	ENSEBUG00000006732	msi2a	76	54.799	Eptatretus_burgeri
ENSSFOG00015012168	msi2b	67	86.957	ENSEASG00005002965	MSI2	97	62.602	Equus_asinus_asinus
ENSSFOG00015012168	msi2b	100	59.453	ENSECAG00000011435	MSI2	80	97.122	Equus_caballus
ENSSFOG00015012168	msi2b	100	72.048	ENSELUG00000001361	msi2b	100	72.048	Esox_lucius
ENSSFOG00015012168	msi2b	92	72.267	ENSELUG00000011747	msi2a	95	85.950	Esox_lucius
ENSSFOG00015012168	msi2b	76	82.449	ENSFCAG00000041686	MSI2	96	82.449	Felis_catus
ENSSFOG00015012168	msi2b	74	87.204	ENSFDAG00000016118	MSI2	100	63.859	Fukomys_damarensis
ENSSFOG00015012168	msi2b	100	68.765	ENSFHEG00000000084	msi2a	95	83.471	Fundulus_heteroclitus
ENSSFOG00015012168	msi2b	82	82.449	ENSGALG00000005567	MSI2	100	62.935	Gallus_gallus
ENSSFOG00015012168	msi2b	60	74.089	ENSGAFG00000006974	msi2a	90	75.817	Gambusia_affinis
ENSSFOG00015012168	msi2b	100	70.048	ENSGAGG00000016542	MSI2	100	70.488	Gopherus_agassizii
ENSSFOG00015012168	msi2b	74	87.204	ENSGGOG00000013182	MSI2	91	87.143	Gorilla_gorilla
ENSSFOG00015012168	msi2b	100	68.531	ENSHBUG00000020800	msi2a	100	83.265	Haplochromis_burtoni
ENSSFOG00015012168	msi2b	82	71.488	ENSHGLG00000012444	MSI2	100	56.140	Heterocephalus_glaber_female
ENSSFOG00015012168	msi2b	67	57.854	ENSHGLG00100003744	MSI2	100	57.854	Heterocephalus_glaber_male
ENSSFOG00015012168	msi2b	88	61.658	ENSHCOG00000017241	-	90	61.658	Hippocampus_comes
ENSSFOG00015012168	msi2b	100	68.298	ENSHCOG00000000266	msi2a	100	68.852	Hippocampus_comes
ENSSFOG00015012168	msi2b	100	72.549	ENSIPUG00000003732	msi2b	95	86.192	Ictalurus_punctatus
ENSSFOG00015012168	msi2b	100	69.718	ENSIPUG00000021097	msi2a	100	84.490	Ictalurus_punctatus
ENSSFOG00015012168	msi2b	63	90.164	ENSSTOG00000007884	MSI2	89	90.164	Ictidomys_tridecemlineatus
ENSSFOG00015012168	msi2b	67	54.789	ENSJJAG00000006292	-	100	54.789	Jaculus_jaculus
ENSSFOG00015012168	msi2b	100	72.059	ENSKMAG00000009494	msi2a	100	72.059	Kryptolebias_marmoratus
ENSSFOG00015012168	msi2b	100	68.998	ENSLBEG00000007061	msi2a	95	83.471	Labrus_bergylta
ENSSFOG00015012168	msi2b	87	61.714	ENSLBEG00000026223	-	96	61.714	Labrus_bergylta
ENSSFOG00015012168	msi2b	100	73.529	ENSLOCG00000004675	msi2b	100	73.529	Lepisosteus_oculatus
ENSSFOG00015012168	msi2b	74	87.204	ENSMFAG00000003775	MSI2	91	87.143	Macaca_fascicularis
ENSSFOG00015012168	msi2b	74	87.204	ENSMMUG00000002069	MSI2	91	87.143	Macaca_mulatta
ENSSFOG00015012168	msi2b	76	82.449	ENSMNEG00000045275	MSI2	96	82.449	Macaca_nemestrina
ENSSFOG00015012168	msi2b	74	87.204	ENSMLEG00000033888	MSI2	91	87.143	Mandrillus_leucophaeus
ENSSFOG00015012168	msi2b	100	68.837	ENSMAMG00000010503	msi2a	100	83.673	Mastacembelus_armatus
ENSSFOG00015012168	msi2b	100	66.359	ENSMAMG00000002488	-	99	75.163	Mastacembelus_armatus
ENSSFOG00015012168	msi2b	100	68.531	ENSMZEG00005007676	msi2a	95	83.265	Maylandia_zebra
ENSSFOG00015012168	msi2b	82	82.041	ENSMAUG00000003862	Msi2	100	62.779	Mesocricetus_auratus
ENSSFOG00015012168	msi2b	76	82.449	ENSMICG00000013598	-	96	82.449	Microcebus_murinus
ENSSFOG00015012168	msi2b	76	64.979	ENSMICG00000032913	-	100	64.979	Microcebus_murinus
ENSSFOG00015012168	msi2b	82	82.041	ENSMOCG00000005820	Msi2	100	62.687	Microtus_ochrogaster
ENSSFOG00015012168	msi2b	60	83.471	ENSMMOG00000008348	msi2a	90	75.497	Mola_mola
ENSSFOG00015012168	msi2b	67	58.238	ENSMODG00000014790	MSI2	100	58.238	Monodelphis_domestica
ENSSFOG00015012168	msi2b	100	75.484	ENSMALG00000000071	msi2a	100	83.673	Monopterus_albus
ENSSFOG00015012168	msi2b	82	82.041	MGP_CAROLIEiJ_G0016948	Msi2	96	82.041	Mus_caroli
ENSSFOG00015012168	msi2b	82	82.041	ENSMUSG00000069769	Msi2	96	82.041	Mus_musculus
ENSSFOG00015012168	msi2b	82	82.041	MGP_PahariEiJ_G0018079	Msi2	96	82.041	Mus_pahari
ENSSFOG00015012168	msi2b	82	82.041	MGP_SPRETEiJ_G0017795	Msi2	96	82.041	Mus_spretus
ENSSFOG00015012168	msi2b	68	87.204	ENSMPUG00000015377	MSI2	92	87.204	Mustela_putorius_furo
ENSSFOG00015012168	msi2b	68	87.204	ENSMLUG00000007865	MSI2	95	87.204	Myotis_lucifugus
ENSSFOG00015012168	msi2b	82	82.041	ENSNGAG00000017807	Msi2	100	62.687	Nannospalax_galili
ENSSFOG00015012168	msi2b	100	71.814	ENSNBRG00000014596	msi2a	95	83.058	Neolamprologus_brichardi
ENSSFOG00015012168	msi2b	73	87.143	ENSNLEG00000008059	MSI2	94	87.081	Nomascus_leucogenys
ENSSFOG00015012168	msi2b	82	82.449	ENSODEG00000011974	MSI2	100	62.935	Octodon_degus
ENSSFOG00015012168	msi2b	92	65.500	ENSOANG00000005667	MSI2	94	65.500	Ornithorhynchus_anatinus
ENSSFOG00015012168	msi2b	68	87.204	ENSOCUG00000010440	MSI2	92	87.204	Oryctolagus_cuniculus
ENSSFOG00015012168	msi2b	100	72.059	ENSORLG00000009671	msi2a	95	80.165	Oryzias_latipes
ENSSFOG00015012168	msi2b	100	68.765	ENSORLG00020021556	msi2a	100	83.673	Oryzias_latipes_hni
ENSSFOG00015012168	msi2b	100	72.059	ENSORLG00015004592	msi2a	95	80.165	Oryzias_latipes_hsok
ENSSFOG00015012168	msi2b	100	72.059	ENSOMEG00000000146	msi2a	100	83.673	Oryzias_melastigma
ENSSFOG00015012168	msi2b	68	80.569	ENSOGAG00000005621	MSI2	95	80.569	Otolemur_garnettii
ENSSFOG00015012168	msi2b	74	87.204	ENSPPAG00000037697	MSI2	91	87.143	Pan_paniscus
ENSSFOG00015012168	msi2b	68	87.204	ENSPPRG00000001848	MSI2	91	87.143	Panthera_pardus
ENSSFOG00015012168	msi2b	73	87.143	ENSPTIG00000021678	MSI2	82	87.081	Panthera_tigris_altaica
ENSSFOG00015012168	msi2b	58	75.556	ENSPTIG00000021873	-	89	75.556	Panthera_tigris_altaica
ENSSFOG00015012168	msi2b	74	87.204	ENSPTRG00000009437	MSI2	91	87.143	Pan_troglodytes
ENSSFOG00015012168	msi2b	76	82.449	ENSPANG00000022319	MSI2	96	82.449	Papio_anubis
ENSSFOG00015012168	msi2b	100	62.408	ENSPKIG00000007038	-	100	62.408	Paramormyrops_kingsleyae
ENSSFOG00015012168	msi2b	100	72.059	ENSPSIG00000008618	MSI2	100	72.059	Pelodiscus_sinensis
ENSSFOG00015012168	msi2b	76	83.058	ENSPMGG00000005888	msi2a	95	83.058	Periophthalmus_magnuspinnatus
ENSSFOG00015012168	msi2b	74	88.208	ENSPCIG00000006063	MSI2	100	64.268	Phascolarctos_cinereus
ENSSFOG00015012168	msi2b	100	68.998	ENSPREG00000000881	msi2a	100	69.321	Poecilia_reticulata
ENSSFOG00015012168	msi2b	56	85.621	ENSPPYG00000008244	-	94	85.621	Pongo_abelii
ENSSFOG00015012168	msi2b	61	87.500	ENSPVAG00000017053	MSI2	86	87.500	Pteropus_vampyrus
ENSSFOG00015012168	msi2b	100	68.531	ENSPNYG00000018393	msi2a	100	83.265	Pundamilia_nyererei
ENSSFOG00015012168	msi2b	100	73.350	ENSPNAG00000014957	msi2a	95	85.306	Pygocentrus_nattereri
ENSSFOG00015012168	msi2b	100	72.861	ENSPNAG00000000844	msi2b	95	85.537	Pygocentrus_nattereri
ENSSFOG00015012168	msi2b	63	90.164	ENSRNOG00000025338	Msi2	95	90.164	Rattus_norvegicus
ENSSFOG00015012168	msi2b	74	87.204	ENSSBOG00000026425	MSI2	91	87.143	Saimiri_boliviensis_boliviensis
ENSSFOG00015012168	msi2b	74	88.152	ENSSHAG00000008672	MSI2	100	64.402	Sarcophilus_harrisii
ENSSFOG00015012168	msi2b	100	68.765	ENSSMAG00000018484	msi2a	100	83.673	Scophthalmus_maximus
ENSSFOG00015012168	msi2b	100	68.998	ENSSDUG00000014507	msi2a	100	83.673	Seriola_dumerili
ENSSFOG00015012168	msi2b	76	83.058	ENSSDUG00000021968	-	99	74.510	Seriola_dumerili
ENSSFOG00015012168	msi2b	100	68.998	ENSSLDG00000017172	msi2a	95	83.471	Seriola_lalandi_dorsalis
ENSSFOG00015012168	msi2b	100	68.998	ENSSPAG00000017793	msi2a	97	82.143	Stegastes_partitus
ENSSFOG00015012168	msi2b	74	87.204	ENSSSCG00000038505	MSI2	96	82.449	Sus_scrofa
ENSSFOG00015012168	msi2b	67	58.238	ENSTGUG00000008452	MSI2	100	58.238	Taeniopygia_guttata
ENSSFOG00015012168	msi2b	90	71.392	ENSTRUG00000021248	msi2a	94	82.143	Takifugu_rubripes
ENSSFOG00015012168	msi2b	59	68.880	ENSTBEG00000001241	MSI2	73	68.880	Tupaia_belangeri
ENSSFOG00015012168	msi2b	55	90.789	ENSTTRG00000002189	MSI2	91	90.789	Tursiops_truncatus
ENSSFOG00015012168	msi2b	68	87.204	ENSUAMG00000000700	MSI2	97	87.204	Ursus_americanus
ENSSFOG00015012168	msi2b	82	82.449	ENSVVUG00000011783	MSI2	100	62.935	Vulpes_vulpes
ENSSFOG00015012168	msi2b	100	71.712	ENSXCOG00000006113	msi2a	100	71.960	Xiphophorus_couchianus
ENSSFOG00015012168	msi2b	100	68.765	ENSXMAG00000000608	msi2a	100	83.673	Xiphophorus_maculatus