EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015012483 (Gene tree)
Gene ID: 108921732
Gene Symbol: imp3
Alias: zgc:56526
Full Name: IMP3%2C U3 small nucleolar ribonucleoprotein
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 7073 bases
Position: chrKV410807.1:1623434-1630506
Accession: 108921732
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015019402	S4	PF01479.25	1.6e-09	1	1
ENSSFOP00015019402	Ribosomal_S4	PF00163.19	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015019628	-	3706	XM_018731388	ENSSFOP00015019402	183 (aa)	XP_018586904	A0A1W4Y540

Gene Model

Click here to download ENSSFOG00015012483's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015012483's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015012483	imp3	52	32.990	ENSSFOG00015000650	rps9	50	32.990

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015012483	imp3	100	89.071	ENSAPOG00000014720	imp3	100	89.071	Acanthochromis_polyacanthus
ENSSFOG00015012483	imp3	99	70.879	ENSAMEG00000019247	IMP3	99	70.879	Ailuropoda_melanoleuca
ENSSFOG00015012483	imp3	98	86.592	ENSACIG00000022070	imp3	96	86.592	Amphilophus_citrinellus
ENSSFOG00015012483	imp3	100	89.617	ENSAOCG00000015761	imp3	100	89.617	Amphiprion_ocellaris
ENSSFOG00015012483	imp3	100	88.525	ENSAPEG00000005250	imp3	100	88.525	Amphiprion_percula
ENSSFOG00015012483	imp3	100	87.978	ENSATEG00000020021	imp3	100	87.978	Anabas_testudineus
ENSSFOG00015012483	imp3	100	69.519	ENSACAG00000016259	IMP3	100	69.519	Anolis_carolinensis
ENSSFOG00015012483	imp3	100	60.870	ENSANAG00000036874	-	100	60.870	Aotus_nancymaae
ENSSFOG00015012483	imp3	99	71.429	ENSANAG00000016669	-	99	71.429	Aotus_nancymaae
ENSSFOG00015012483	imp3	100	87.432	ENSACLG00000009929	imp3	100	87.432	Astatotilapia_calliptera
ENSSFOG00015012483	imp3	96	85.714	ENSAMXG00000018715	imp3	99	85.714	Astyanax_mexicanus
ENSSFOG00015012483	imp3	99	52.198	WBGene00016740	C48B6.2	99	52.198	Caenorhabditis_elegans
ENSSFOG00015012483	imp3	99	71.429	ENSCJAG00000044585	IMP3	99	71.429	Callithrix_jacchus
ENSSFOG00015012483	imp3	99	69.231	ENSCAFG00000018039	IMP3	81	69.231	Canis_familiaris
ENSSFOG00015012483	imp3	99	54.945	ENSCAFG00020006737	-	99	55.495	Canis_lupus_dingo
ENSSFOG00015012483	imp3	99	69.231	ENSCAFG00020003760	-	99	69.231	Canis_lupus_dingo
ENSSFOG00015012483	imp3	99	70.330	ENSCHIG00000006295	IMP3	99	70.330	Capra_hircus
ENSSFOG00015012483	imp3	99	70.879	ENSTSYG00000005503	IMP3	99	70.879	Carlito_syrichta
ENSSFOG00015012483	imp3	99	71.429	ENSCPOG00000012016	IMP3	99	71.429	Cavia_porcellus
ENSSFOG00015012483	imp3	98	61.667	ENSCCAG00000023378	-	99	60.345	Cebus_capucinus
ENSSFOG00015012483	imp3	99	71.429	ENSCCAG00000002712	-	99	71.429	Cebus_capucinus
ENSSFOG00015012483	imp3	99	70.879	ENSCATG00000015188	IMP3	99	70.879	Cercocebus_atys
ENSSFOG00015012483	imp3	99	70.879	ENSCSAG00000019732	IMP3	99	70.879	Chlorocebus_sabaeus
ENSSFOG00015012483	imp3	99	71.429	ENSCHOG00000012046	IMP3	99	71.429	Choloepus_hoffmanni
ENSSFOG00015012483	imp3	100	67.568	ENSCPBG00000021662	IMP3	100	67.568	Chrysemys_picta_bellii
ENSSFOG00015012483	imp3	99	66.298	ENSCING00000004233	-	100	66.298	Ciona_intestinalis
ENSSFOG00015012483	imp3	99	67.403	ENSCSAVG00000000698	-	100	67.403	Ciona_savignyi
ENSSFOG00015012483	imp3	99	70.879	ENSCANG00000018342	IMP3	99	70.879	Colobus_angolensis_palliatus
ENSSFOG00015012483	imp3	99	70.330	ENSCGRG00001001326	Imp3	99	70.330	Cricetulus_griseus_chok1gshd
ENSSFOG00015012483	imp3	99	70.330	ENSCGRG00000018907	Imp3	99	70.330	Cricetulus_griseus_crigri
ENSSFOG00015012483	imp3	99	86.813	ENSCSEG00000017200	imp3	99	86.813	Cynoglossus_semilaevis
ENSSFOG00015012483	imp3	100	78.421	ENSCVAG00000019511	imp3	100	78.421	Cyprinodon_variegatus
ENSSFOG00015012483	imp3	100	85.246	ENSDARG00000115266	imp3	100	85.799	Danio_rerio
ENSSFOG00015012483	imp3	99	70.330	ENSDNOG00000015787	IMP3	80	70.330	Dasypus_novemcinctus
ENSSFOG00015012483	imp3	99	70.879	ENSDORG00000029301	Imp3	99	70.879	Dipodomys_ordii
ENSSFOG00015012483	imp3	99	64.641	FBgn0034232	CG4866	100	64.641	Drosophila_melanogaster
ENSSFOG00015012483	imp3	99	69.780	ENSETEG00000004278	IMP3	99	69.780	Echinops_telfairi
ENSSFOG00015012483	imp3	99	73.481	ENSEBUG00000002343	imp3	99	73.481	Eptatretus_burgeri
ENSSFOG00015012483	imp3	99	70.330	ENSEASG00005015693	IMP3	99	70.330	Equus_asinus_asinus
ENSSFOG00015012483	imp3	99	70.879	ENSECAG00000015786	IMP3	99	70.879	Equus_caballus
ENSSFOG00015012483	imp3	100	86.885	ENSELUG00000023264	imp3	100	86.885	Esox_lucius
ENSSFOG00015012483	imp3	99	70.879	ENSFCAG00000040328	IMP3	99	70.879	Felis_catus
ENSSFOG00015012483	imp3	70	58.462	ENSFALG00000014811	IMP3	100	59.091	Ficedula_albicollis
ENSSFOG00015012483	imp3	99	70.879	ENSFDAG00000018422	IMP3	99	70.879	Fukomys_damarensis
ENSSFOG00015012483	imp3	100	86.885	ENSFHEG00000016954	imp3	100	86.885	Fundulus_heteroclitus
ENSSFOG00015012483	imp3	100	88.525	ENSGMOG00000018162	imp3	100	88.525	Gadus_morhua
ENSSFOG00015012483	imp3	100	56.757	ENSGALG00000040238	IMP3	100	57.838	Gallus_gallus
ENSSFOG00015012483	imp3	100	86.339	ENSGAFG00000007425	imp3	100	86.339	Gambusia_affinis
ENSSFOG00015012483	imp3	99	86.264	ENSGACG00000015998	imp3	99	86.264	Gasterosteus_aculeatus
ENSSFOG00015012483	imp3	100	66.486	ENSGAGG00000008163	IMP3	100	66.486	Gopherus_agassizii
ENSSFOG00015012483	imp3	99	70.879	ENSGGOG00000025122	IMP3	99	70.879	Gorilla_gorilla
ENSSFOG00015012483	imp3	100	87.432	ENSHBUG00000018453	imp3	100	87.432	Haplochromis_burtoni
ENSSFOG00015012483	imp3	99	70.330	ENSHGLG00000019824	IMP3	99	70.330	Heterocephalus_glaber_female
ENSSFOG00015012483	imp3	99	70.330	ENSHGLG00100020660	IMP3	99	70.330	Heterocephalus_glaber_male
ENSSFOG00015012483	imp3	99	86.740	ENSHCOG00000020565	imp3	99	86.740	Hippocampus_comes
ENSSFOG00015012483	imp3	100	87.978	ENSIPUG00000013142	imp3	100	87.978	Ictalurus_punctatus
ENSSFOG00015012483	imp3	99	71.429	ENSSTOG00000030143	IMP3	99	71.429	Ictidomys_tridecemlineatus
ENSSFOG00015012483	imp3	99	87.363	ENSKMAG00000001956	imp3	99	87.363	Kryptolebias_marmoratus
ENSSFOG00015012483	imp3	100	86.339	ENSLBEG00000008178	imp3	100	86.339	Labrus_bergylta
ENSSFOG00015012483	imp3	100	84.699	ENSLACG00000022148	imp3	100	84.699	Latimeria_chalumnae
ENSSFOG00015012483	imp3	100	88.525	ENSLOCG00000010237	imp3	100	88.525	Lepisosteus_oculatus
ENSSFOG00015012483	imp3	99	69.780	ENSLAFG00000004425	IMP3	99	69.780	Loxodonta_africana
ENSSFOG00015012483	imp3	99	70.879	ENSMFAG00000008867	IMP3	99	70.879	Macaca_fascicularis
ENSSFOG00015012483	imp3	99	70.879	ENSMMUG00000016103	IMP3	99	70.879	Macaca_mulatta
ENSSFOG00015012483	imp3	99	70.879	ENSMNEG00000026328	IMP3	99	70.879	Macaca_nemestrina
ENSSFOG00015012483	imp3	100	86.885	ENSMAMG00000003215	imp3	100	86.885	Mastacembelus_armatus
ENSSFOG00015012483	imp3	100	87.432	ENSMZEG00005005544	imp3	100	87.432	Maylandia_zebra
ENSSFOG00015012483	imp3	99	69.780	ENSMAUG00000010279	Imp3	99	69.780	Mesocricetus_auratus
ENSSFOG00015012483	imp3	99	70.879	ENSMICG00000044149	IMP3	99	70.879	Microcebus_murinus
ENSSFOG00015012483	imp3	99	70.330	ENSMOCG00000008647	Imp3	99	70.330	Microtus_ochrogaster
ENSSFOG00015012483	imp3	96	89.714	ENSMMOG00000018117	imp3	84	89.714	Mola_mola
ENSSFOG00015012483	imp3	99	71.429	ENSMODG00000025193	IMP3	99	71.429	Monodelphis_domestica
ENSSFOG00015012483	imp3	99	88.462	ENSMALG00000006505	imp3	99	88.462	Monopterus_albus
ENSSFOG00015012483	imp3	99	70.879	MGP_CAROLIEiJ_G0032258	Imp3	99	70.879	Mus_caroli
ENSSFOG00015012483	imp3	99	70.879	ENSMUSG00000032288	Imp3	99	70.879	Mus_musculus
ENSSFOG00015012483	imp3	99	70.879	MGP_PahariEiJ_G0015125	Imp3	99	70.879	Mus_pahari
ENSSFOG00015012483	imp3	99	70.879	MGP_SPRETEiJ_G0033398	Imp3	99	70.879	Mus_spretus
ENSSFOG00015012483	imp3	99	70.330	ENSMPUG00000020147	IMP3	99	70.330	Mustela_putorius_furo
ENSSFOG00015012483	imp3	99	71.429	ENSMLUG00000014032	IMP3	99	71.429	Myotis_lucifugus
ENSSFOG00015012483	imp3	99	68.681	ENSNGAG00000017248	Imp3	99	68.681	Nannospalax_galili
ENSSFOG00015012483	imp3	100	87.432	ENSNBRG00000004060	imp3	100	87.432	Neolamprologus_brichardi
ENSSFOG00015012483	imp3	99	71.978	ENSOPRG00000015906	-	99	71.978	Ochotona_princeps
ENSSFOG00015012483	imp3	99	71.429	ENSODEG00000020194	IMP3	99	71.429	Octodon_degus
ENSSFOG00015012483	imp3	100	86.885	ENSONIG00000010661	imp3	100	86.885	Oreochromis_niloticus
ENSSFOG00015012483	imp3	99	70.879	ENSOCUG00000004690	IMP3	99	70.879	Oryctolagus_cuniculus
ENSSFOG00015012483	imp3	100	86.885	ENSORLG00000004484	imp3	100	86.885	Oryzias_latipes
ENSSFOG00015012483	imp3	100	86.885	ENSORLG00020003771	imp3	100	86.885	Oryzias_latipes_hni
ENSSFOG00015012483	imp3	100	86.339	ENSORLG00015006933	imp3	100	86.339	Oryzias_latipes_hsok
ENSSFOG00015012483	imp3	100	86.885	ENSOMEG00000016160	imp3	100	86.885	Oryzias_melastigma
ENSSFOG00015012483	imp3	99	70.879	ENSOGAG00000004917	IMP3	99	70.879	Otolemur_garnettii
ENSSFOG00015012483	imp3	99	70.879	ENSPPAG00000009241	IMP3	99	70.879	Pan_paniscus
ENSSFOG00015012483	imp3	99	70.879	ENSPPRG00000018701	IMP3	99	70.879	Panthera_pardus
ENSSFOG00015012483	imp3	99	70.879	ENSPTRG00000052235	IMP3	99	70.879	Pan_troglodytes
ENSSFOG00015012483	imp3	99	70.879	ENSPANG00000013668	IMP3	99	70.879	Papio_anubis
ENSSFOG00015012483	imp3	100	88.525	ENSPKIG00000007169	imp3	100	88.525	Paramormyrops_kingsleyae
ENSSFOG00015012483	imp3	99	80.541	ENSPMGG00000009379	imp3	99	80.541	Periophthalmus_magnuspinnatus
ENSSFOG00015012483	imp3	99	70.330	ENSPEMG00000013003	Imp3	99	70.330	Peromyscus_maniculatus_bairdii
ENSSFOG00015012483	imp3	100	86.339	ENSPFOG00000016529	imp3	100	86.339	Poecilia_formosa
ENSSFOG00015012483	imp3	100	86.885	ENSPLAG00000013831	imp3	100	86.885	Poecilia_latipinna
ENSSFOG00015012483	imp3	99	86.813	ENSPMEG00000000797	imp3	99	86.813	Poecilia_mexicana
ENSSFOG00015012483	imp3	100	87.432	ENSPREG00000006885	imp3	100	87.432	Poecilia_reticulata
ENSSFOG00015012483	imp3	99	71.429	ENSPPYG00000006664	IMP3	99	71.429	Pongo_abelii
ENSSFOG00015012483	imp3	99	70.330	ENSPCAG00000006920	IMP3	99	70.330	Procavia_capensis
ENSSFOG00015012483	imp3	99	70.879	ENSPCOG00000012367	IMP3	99	70.879	Propithecus_coquereli
ENSSFOG00015012483	imp3	99	71.978	ENSPVAG00000010036	IMP3	99	71.978	Pteropus_vampyrus
ENSSFOG00015012483	imp3	100	87.432	ENSPNYG00000000324	imp3	100	87.432	Pundamilia_nyererei
ENSSFOG00015012483	imp3	100	86.885	ENSPNAG00000017113	imp3	100	86.885	Pygocentrus_nattereri
ENSSFOG00015012483	imp3	99	70.330	ENSRNOG00000017460	Imp3	99	70.330	Rattus_norvegicus
ENSSFOG00015012483	imp3	99	70.330	ENSRBIG00000024522	IMP3	99	70.330	Rhinopithecus_bieti
ENSSFOG00015012483	imp3	99	70.330	ENSRROG00000024157	IMP3	99	70.330	Rhinopithecus_roxellana
ENSSFOG00015012483	imp3	99	53.297	YHR148W	-	99	53.297	Saccharomyces_cerevisiae
ENSSFOG00015012483	imp3	99	71.429	ENSSBOG00000006542	-	99	71.429	Saimiri_boliviensis_boliviensis
ENSSFOG00015012483	imp3	100	61.413	ENSSBOG00000026404	-	100	61.413	Saimiri_boliviensis_boliviensis
ENSSFOG00015012483	imp3	99	69.231	ENSSHAG00000006200	IMP3	99	69.231	Sarcophilus_harrisii
ENSSFOG00015012483	imp3	100	86.885	ENSSMAG00000007865	imp3	100	86.885	Scophthalmus_maximus
ENSSFOG00015012483	imp3	100	88.525	ENSSDUG00000010594	imp3	100	88.525	Seriola_dumerili
ENSSFOG00015012483	imp3	100	88.525	ENSSLDG00000015587	imp3	100	88.525	Seriola_lalandi_dorsalis
ENSSFOG00015012483	imp3	99	71.429	ENSSARG00000009657	IMP3	99	71.429	Sorex_araneus
ENSSFOG00015012483	imp3	100	90.164	ENSSPAG00000002088	imp3	100	90.164	Stegastes_partitus
ENSSFOG00015012483	imp3	100	57.838	ENSTGUG00000013228	IMP3	100	58.919	Taeniopygia_guttata
ENSSFOG00015012483	imp3	99	88.462	ENSTRUG00000025783	imp3	99	88.462	Takifugu_rubripes
ENSSFOG00015012483	imp3	99	71.429	ENSUAMG00000022724	IMP3	99	71.429	Ursus_americanus
ENSSFOG00015012483	imp3	99	71.429	ENSUMAG00000003736	IMP3	99	71.429	Ursus_maritimus
ENSSFOG00015012483	imp3	99	69.780	ENSVVUG00000019589	IMP3	99	69.780	Vulpes_vulpes
ENSSFOG00015012483	imp3	96	86.286	ENSXCOG00000007392	imp3	96	86.286	Xiphophorus_couchianus
ENSSFOG00015012483	imp3	100	86.339	ENSXMAG00000023049	imp3	100	86.339	Xiphophorus_maculatus