EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSFOG00015012565 (Gene tree)
Gene ID
108927544
Gene Symbol
pabpn1 (1 of many)
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
polyadenylate-binding protein 2-B-like
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Plus strand
Length
10187 bases
Position
chrKV410874.1:5512446-5522632
Accession
108927544
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015019555RRM_1PF00076.221.7e-1711
ENSSFOP00015019528RRM_1PF00076.222.6e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015019754-1230XM_018740930ENSSFOP00015019528273 (aa)XP_018596446A0A1W4YY23
ENSSFOT00015019781-1077XM_018740933ENSSFOP00015019555222 (aa)XP_018596449A0A1W4YY20
Gene Model
Click here to download ENSSFOG00015012565's gene model file
Pathways
Pathway IDPathway NameSource
sfm03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015012565's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSFOG00015012565pabpn16573.611ENSSFOG00015015833pabpn1l8566.486
ENSSFOG00015012565pabpn110090.987ENSSFOG00015014718pabpn110090.987
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015012565pabpn19081.553ENSG00000100836PABPN19482.143Homo_sapiens
ENSSFOG00015012565pabpn19676.498ENSG00000258643BCL2L2-PABPN16576.498Homo_sapiens
ENSSFOG00015012565pabpn110090.129ENSAPOG00000016425pabpn110090.129Acanthochromis_polyacanthus
ENSSFOG00015012565pabpn18484.211ENSAMEG00000007048BCL2L2-PABPN110084.211Ailuropoda_melanoleuca
ENSSFOG00015012565pabpn110088.462ENSACIG00000021744pabpn19495.152Amphilophus_citrinellus
ENSSFOG00015012565pabpn110090.129ENSAOCG00000015805pabpn110090.129Amphiprion_ocellaris
ENSSFOG00015012565pabpn110090.129ENSAPEG00000009623pabpn110090.129Amphiprion_percula
ENSSFOG00015012565pabpn110090.558ENSATEG00000020531pabpn110090.558Anabas_testudineus
ENSSFOG00015012565pabpn18684.103ENSACAG00000006185-8077.333Anolis_carolinensis
ENSSFOG00015012565pabpn18982.000ENSANAG00000024513-7581.340Aotus_nancymaae
ENSSFOG00015012565pabpn110088.153ENSACLG00000016374pabpn110088.153Astatotilapia_calliptera
ENSSFOG00015012565pabpn110090.598ENSAMXG00000000452pabpn110097.175Astyanax_mexicanus
ENSSFOG00015012565pabpn18982.000ENSBTAG00000006884PABPN17177.376Bos_taurus
ENSSFOG00015012565pabpn18582.812ENSBTAG00000053753-7182.812Bos_taurus
ENSSFOG00015012565pabpn18676.289ENSBTAG00000050594-7481.183Bos_taurus
ENSSFOG00015012565pabpn16460.959WBGene00003904pabp-28655.556Caenorhabditis_elegans
ENSSFOG00015012565pabpn17480.357ENSCJAG00000004407-8480.357Callithrix_jacchus
ENSSFOG00015012565pabpn19081.553ENSCJAG00000007960-7781.340Callithrix_jacchus
ENSSFOG00015012565pabpn19081.553ENSCAFG00000011482PABPN17177.828Canis_familiaris
ENSSFOG00015012565pabpn19081.553ENSCAFG00020006651-7177.828Canis_lupus_dingo
ENSSFOG00015012565pabpn19081.553ENSCAFG00020007298-7177.828Canis_lupus_dingo
ENSSFOG00015012565pabpn19081.553ENSCHIG00000012184PABPN17177.828Capra_hircus
ENSSFOG00015012565pabpn19676.498ENSTSYG00000033996BCL2L2-PABPN19482.143Carlito_syrichta
ENSSFOG00015012565pabpn16281.295ENSCAPG00000009461-9981.295Cavia_aperea
ENSSFOG00015012565pabpn19081.068ENSCPOG00000025574PABPN17177.376Cavia_porcellus
ENSSFOG00015012565pabpn19081.553ENSCCAG00000033954BCL2L2-PABPN17781.340Cebus_capucinus
ENSSFOG00015012565pabpn19676.498ENSCATG00000038536BCL2L2-PABPN17781.340Cercocebus_atys
ENSSFOG00015012565pabpn16881.457ENSCLAG00000012423PABPN15681.457Chinchilla_lanigera
ENSSFOG00015012565pabpn19080.097ENSCSAG00000016036PABPN17176.471Chlorocebus_sabaeus
ENSSFOG00015012565pabpn19372.857ENSCHOG00000004798BCL2L2-PABPN18872.857Choloepus_hoffmanni
ENSSFOG00015012565pabpn17484.524ENSCPBG00000026060-9484.524Chrysemys_picta_bellii
ENSSFOG00015012565pabpn19462.085ENSCING00000012468-8961.611Ciona_intestinalis
ENSSFOG00015012565pabpn17963.483ENSCSAVG00000002001-9361.078Ciona_savignyi
ENSSFOG00015012565pabpn18970.202ENSCANG00000030980-7568.116Colobus_angolensis_palliatus
ENSSFOG00015012565pabpn19676.498ENSCANG00000009750BCL2L2-PABPN19482.143Colobus_angolensis_palliatus
ENSSFOG00015012565pabpn19082.039ENSCGRG00001019696Pabpn19482.738Cricetulus_griseus_chok1gshd
ENSSFOG00015012565pabpn16592.517ENSCGRG00000011102Pabpn19192.517Cricetulus_griseus_crigri
ENSSFOG00015012565pabpn110089.270ENSCSEG00000008774pabpn110089.270Cynoglossus_semilaevis
ENSSFOG00015012565pabpn110085.106ENSCVAG00000003152pabpn110086.383Cyprinodon_variegatus
ENSSFOG00015012565pabpn110090.175ENSDARG00000045373pabpn19595.631Danio_rerio
ENSSFOG00015012565pabpn18454.545ENSDARG00000087996pabpn1l8660.544Danio_rerio
ENSSFOG00015012565pabpn19081.553ENSDNOG00000023682PABPN17177.828Dasypus_novemcinctus
ENSSFOG00015012565pabpn15982.707ENSDORG00000023928-8581.967Dipodomys_ordii
ENSSFOG00015012565pabpn19080.583ENSDORG00000028966-7176.923Dipodomys_ordii
ENSSFOG00015012565pabpn18963.636FBgn0005648Pabp28364.362Drosophila_melanogaster
ENSSFOG00015012565pabpn19975.455ENSEBUG00000002322pabpn19475.455Eptatretus_burgeri
ENSSFOG00015012565pabpn19081.553ENSEASG00005011716PABPN17177.828Equus_asinus_asinus
ENSSFOG00015012565pabpn18980.882ENSECAG00000011652PABPN16977.143Equus_caballus
ENSSFOG00015012565pabpn19079.612ENSEEUG00000012973-7175.598Erinaceus_europaeus
ENSSFOG00015012565pabpn110086.920ENSELUG00000022654pabpn110086.920Esox_lucius
ENSSFOG00015012565pabpn19081.553ENSFCAG00000031922PABPN17177.828Felis_catus
ENSSFOG00015012565pabpn17481.548ENSFDAG00000018381BCL2L2-PABPN19481.548Fukomys_damarensis
ENSSFOG00015012565pabpn110086.266ENSFHEG00000007215pabpn110086.266Fundulus_heteroclitus
ENSSFOG00015012565pabpn110086.014ENSGMOG00000003922pabpn110088.811Gadus_morhua
ENSSFOG00015012565pabpn18681.726ENSGALG00000052930-6181.517Gallus_gallus
ENSSFOG00015012565pabpn110087.234ENSGAFG00000017099pabpn110088.511Gambusia_affinis
ENSSFOG00015012565pabpn110088.772ENSGACG00000002167pabpn110088.772Gasterosteus_aculeatus
ENSSFOG00015012565pabpn19368.750ENSGGOG00000039675-7868.750Gorilla_gorilla
ENSSFOG00015012565pabpn19081.553ENSGGOG00000022683-7781.340Gorilla_gorilla
ENSSFOG00015012565pabpn19866.968ENSGGOG00000025919-9868.456Gorilla_gorilla
ENSSFOG00015012565pabpn110089.700ENSHBUG00000019523pabpn110089.700Haplochromis_burtoni
ENSSFOG00015012565pabpn19966.816ENSHGLG00000018588-7470.936Heterocephalus_glaber_female
ENSSFOG00015012565pabpn19081.068ENSHGLG00000002927-9291.156Heterocephalus_glaber_female
ENSSFOG00015012565pabpn17464.072ENSHGLG00000009842-9364.072Heterocephalus_glaber_female
ENSSFOG00015012565pabpn17470.659ENSHGLG00100018935-9473.256Heterocephalus_glaber_male
ENSSFOG00015012565pabpn19966.816ENSHGLG00100015565-7570.936Heterocephalus_glaber_male
ENSSFOG00015012565pabpn19175.610ENSHGLG00100006673-9291.156Heterocephalus_glaber_male
ENSSFOG00015012565pabpn110086.695ENSHCOG00000004655pabpn19589.593Hippocampus_comes
ENSSFOG00015012565pabpn110090.987ENSIPUG00000008085PABPN110090.987Ictalurus_punctatus
ENSSFOG00015012565pabpn110087.168ENSIPUG00000000180-9987.168Ictalurus_punctatus
ENSSFOG00015012565pabpn17482.143ENSSTOG00000029847BCL2L2-PABPN19482.143Ictidomys_tridecemlineatus
ENSSFOG00015012565pabpn17482.143ENSJJAG00000023507Gm205219482.143Jaculus_jaculus
ENSSFOG00015012565pabpn110088.462ENSKMAG00000018748pabpn110088.462Kryptolebias_marmoratus
ENSSFOG00015012565pabpn110090.558ENSLBEG00000027266pabpn110090.558Labrus_bergylta
ENSSFOG00015012565pabpn18286.413ENSLACG00000000646pabpn19279.621Latimeria_chalumnae
ENSSFOG00015012565pabpn110086.364ENSLOCG00000000796pabpn110086.713Lepisosteus_oculatus
ENSSFOG00015012565pabpn19466.355ENSLOCG00000004694pabpn1l9966.355Lepisosteus_oculatus
ENSSFOG00015012565pabpn16882.237ENSLAFG00000031227-10082.237Loxodonta_africana
ENSSFOG00015012565pabpn16474.648ENSMFAG00000031355-9974.648Macaca_fascicularis
ENSSFOG00015012565pabpn19676.498ENSMFAG00000032183BCL2L2-PABPN19482.143Macaca_fascicularis
ENSSFOG00015012565pabpn19676.498ENSMMUG00000014747BCL2L2-PABPN110081.633Macaca_mulatta
ENSSFOG00015012565pabpn19067.476ENSMMUG00000048382-6967.143Macaca_mulatta
ENSSFOG00015012565pabpn19676.498ENSMNEG00000045065BCL2L2-PABPN17781.340Macaca_nemestrina
ENSSFOG00015012565pabpn18368.449ENSMNEG00000035750-9974.648Macaca_nemestrina
ENSSFOG00015012565pabpn19676.498ENSMLEG00000043862BCL2L2-PABPN19482.143Mandrillus_leucophaeus
ENSSFOG00015012565pabpn17565.868ENSMLEG00000034623-9972.535Mandrillus_leucophaeus
ENSSFOG00015012565pabpn110088.772ENSMAMG00000007979pabpn110088.772Mastacembelus_armatus
ENSSFOG00015012565pabpn110089.123ENSMZEG00005011904pabpn110089.123Maylandia_zebra
ENSSFOG00015012565pabpn19677.419ENSMAUG00000007383Gm205217278.281Mesocricetus_auratus
ENSSFOG00015012565pabpn19778.571ENSMICG00000010002BCL2L2-PABPN18378.571Microcebus_murinus
ENSSFOG00015012565pabpn19676.959ENSMOCG00000018557Gm205219092.517Microtus_ochrogaster
ENSSFOG00015012565pabpn110090.129ENSMMOG00000005405pabpn110090.129Mola_mola
ENSSFOG00015012565pabpn18978.218ENSMODG00000004535-6776.555Monodelphis_domestica
ENSSFOG00015012565pabpn110089.474ENSMALG00000019612pabpn110089.474Monopterus_albus
ENSSFOG00015012565pabpn19676.498MGP_CAROLIEiJ_G0019276Gm205216576.498Mus_caroli
ENSSFOG00015012565pabpn19081.068MGP_CAROLIEiJ_G0019277Pabpn19091.837Mus_caroli
ENSSFOG00015012565pabpn19081.553ENSMUSG00000022194Pabpn19091.837Mus_musculus
ENSSFOG00015012565pabpn19676.959ENSMUSG00000092232Gm205216576.959Mus_musculus
ENSSFOG00015012565pabpn19676.959MGP_PahariEiJ_G0030294Gm205216576.959Mus_pahari
ENSSFOG00015012565pabpn19081.553MGP_PahariEiJ_G0030295Pabpn110097.619Mus_pahari
ENSSFOG00015012565pabpn19081.553MGP_SPRETEiJ_G0020166Pabpn19091.837Mus_spretus
ENSSFOG00015012565pabpn19676.959MGP_SPRETEiJ_G0020165Gm205216576.959Mus_spretus
ENSSFOG00015012565pabpn16982.051ENSMPUG00000006775-9281.410Mustela_putorius_furo
ENSSFOG00015012565pabpn18483.158ENSMLUG00000003800-10083.158Myotis_lucifugus
ENSSFOG00015012565pabpn18880.303ENSMLUG00000028677-8374.123Myotis_lucifugus
ENSSFOG00015012565pabpn19875.676ENSMLUG00000012452-7175.676Myotis_lucifugus
ENSSFOG00015012565pabpn19676.959ENSNGAG00000019529Gm205216576.959Nannospalax_galili
ENSSFOG00015012565pabpn110089.474ENSNBRG00000023955pabpn110089.474Neolamprologus_brichardi
ENSSFOG00015012565pabpn19676.498ENSNLEG00000015007-7777.828Nomascus_leucogenys
ENSSFOG00015012565pabpn16760.135ENSNLEG00000035292-9960.135Nomascus_leucogenys
ENSSFOG00015012565pabpn19068.780ENSNLEG00000030598-8865.258Nomascus_leucogenys
ENSSFOG00015012565pabpn19073.399ENSODEG00000003739-7366.516Octodon_degus
ENSSFOG00015012565pabpn17972.067ENSODEG00000011555-8970.833Octodon_degus
ENSSFOG00015012565pabpn19676.037ENSODEG00000002083BCL2L2-PABPN17177.376Octodon_degus
ENSSFOG00015012565pabpn110089.474ENSONIG00000008112pabpn110089.474Oreochromis_niloticus
ENSSFOG00015012565pabpn16683.673ENSOANG00000009218-10083.673Ornithorhynchus_anatinus
ENSSFOG00015012565pabpn19081.068ENSOCUG00000016174PABPN17977.376Oryctolagus_cuniculus
ENSSFOG00015012565pabpn110088.772ENSORLG00000027900pabpn110088.772Oryzias_latipes
ENSSFOG00015012565pabpn19989.130ENSORLG00020004681pabpn110086.348Oryzias_latipes_hni
ENSSFOG00015012565pabpn110089.700ENSORLG00015000018pabpn110089.700Oryzias_latipes_hsok
ENSSFOG00015012565pabpn110089.474ENSOMEG00000016618pabpn110089.474Oryzias_melastigma
ENSSFOG00015012565pabpn19081.553ENSOGAG00000008710PABPN17177.828Otolemur_garnettii
ENSSFOG00015012565pabpn19676.498ENSOARG00000019336BCL2L2-PABPN16076.498Ovis_aries
ENSSFOG00015012565pabpn19676.498ENSPPAG00000028984BCL2L2-PABPN19281.410Pan_paniscus
ENSSFOG00015012565pabpn17467.470ENSPPAG00000039421-9367.470Pan_paniscus
ENSSFOG00015012565pabpn19081.553ENSPPRG00000010567PABPN17177.828Panthera_pardus
ENSSFOG00015012565pabpn17482.143ENSPTIG00000001063BCL2L2-PABPN19482.143Panthera_tigris_altaica
ENSSFOG00015012565pabpn19766.514ENSPTRG00000047273-8166.514Pan_troglodytes
ENSSFOG00015012565pabpn19676.498ENSPTRG00000006167BCL2L27781.340Pan_troglodytes
ENSSFOG00015012565pabpn18868.182ENSPANG00000023326-9975.352Papio_anubis
ENSSFOG00015012565pabpn19676.498ENSPANG00000021100BCL2L2-PABPN17781.340Papio_anubis
ENSSFOG00015012565pabpn110090.877ENSPKIG00000008144-10090.877Paramormyrops_kingsleyae
ENSSFOG00015012565pabpn110085.897ENSPKIG00000018052pabpn110089.316Paramormyrops_kingsleyae
ENSSFOG00015012565pabpn17470.122ENSPKIG00000008340pabpn1l8668.156Paramormyrops_kingsleyae
ENSSFOG00015012565pabpn16076.866ENSPSIG00000011959-9476.692Pelodiscus_sinensis
ENSSFOG00015012565pabpn110084.561ENSPMGG00000022027pabpn110084.561Periophthalmus_magnuspinnatus
ENSSFOG00015012565pabpn19677.419ENSPEMG00000008332Gm205218992.517Peromyscus_maniculatus_bairdii
ENSSFOG00015012565pabpn17281.988ENSPMAG00000006212pabpn18970.968Petromyzon_marinus
ENSSFOG00015012565pabpn19079.024ENSPCIG00000027751-7177.376Phascolarctos_cinereus
ENSSFOG00015012565pabpn110087.234ENSPFOG00000010351pabpn19988.511Poecilia_formosa
ENSSFOG00015012565pabpn110086.760ENSPLAG00000022696pabpn110087.805Poecilia_latipinna
ENSSFOG00015012565pabpn110087.234ENSPMEG00000020856pabpn110088.511Poecilia_mexicana
ENSSFOG00015012565pabpn110087.234ENSPREG00000011278pabpn110088.511Poecilia_reticulata
ENSSFOG00015012565pabpn18581.443ENSPPYG00000005663PABPN17377.033Pongo_abelii
ENSSFOG00015012565pabpn18268.229ENSPCAG00000005902PABPN16965.700Procavia_capensis
ENSSFOG00015012565pabpn19778.571ENSPCOG00000028047BCL2L2-PABPN18378.571Propithecus_coquereli
ENSSFOG00015012565pabpn19180.383ENSPVAG00000005270PABPN16879.904Pteropus_vampyrus
ENSSFOG00015012565pabpn110089.700ENSPNYG00000013182pabpn110089.700Pundamilia_nyererei
ENSSFOG00015012565pabpn19262.802ENSPNAG00000021666pabpn1l9565.128Pygocentrus_nattereri
ENSSFOG00015012565pabpn110091.416ENSPNAG00000023526pabpn110091.416Pygocentrus_nattereri
ENSSFOG00015012565pabpn19082.039ENSRNOG00000042195Pabpn17278.281Rattus_norvegicus
ENSSFOG00015012565pabpn19170.335ENSRBIG00000042811-9066.968Rhinopithecus_bieti
ENSSFOG00015012565pabpn19370.755ENSRBIG00000039547-7768.421Rhinopithecus_bieti
ENSSFOG00015012565pabpn19176.098ENSRBIG00000040762BCL2L2-PABPN15583.708Rhinopithecus_bieti
ENSSFOG00015012565pabpn19166.825ENSRROG00000036409-6764.126Rhinopithecus_roxellana
ENSSFOG00015012565pabpn19176.098ENSRROG00000045535BCL2L2-PABPN19482.143Rhinopithecus_roxellana
ENSSFOG00015012565pabpn19171.498ENSRROG00000040409-7768.900Rhinopithecus_roxellana
ENSSFOG00015012565pabpn19672.174ENSSBOG00000026930BCL2L2-PABPN19281.410Saimiri_boliviensis_boliviensis
ENSSFOG00015012565pabpn18481.481ENSSHAG00000014841-8783.684Sarcophilus_harrisii
ENSSFOG00015012565pabpn19861.364ENSSHAG00000007707-8660.096Sarcophilus_harrisii
ENSSFOG00015012565pabpn110090.129ENSSMAG00000020157pabpn110090.129Scophthalmus_maximus
ENSSFOG00015012565pabpn110089.825ENSSDUG00000020582pabpn110089.825Seriola_dumerili
ENSSFOG00015012565pabpn110090.558ENSSLDG00000007118pabpn110090.558Seriola_lalandi_dorsalis
ENSSFOG00015012565pabpn17484.524ENSSPUG00000018308-9484.524Sphenodon_punctatus
ENSSFOG00015012565pabpn110088.889ENSSPAG00000021658pabpn110088.889Stegastes_partitus
ENSSFOG00015012565pabpn19262.381ENSSSCG00000034805-8455.856Sus_scrofa
ENSSFOG00015012565pabpn19973.820ENSSSCG00000002023PABPN17177.828Sus_scrofa
ENSSFOG00015012565pabpn110090.129ENSTRUG00000023664pabpn110090.129Takifugu_rubripes
ENSSFOG00015012565pabpn19590.094ENSTNIG00000005369pabpn19294.444Tetraodon_nigroviridis
ENSSFOG00015012565pabpn19081.553ENSUAMG00000024460PABPN17177.828Ursus_americanus
ENSSFOG00015012565pabpn19676.498ENSUMAG00000014288BCL2L2-PABPN16576.498Ursus_maritimus
ENSSFOG00015012565pabpn19676.498ENSVVUG00000019912BCL2L2-PABPN17484.211Vulpes_vulpes
ENSSFOG00015012565pabpn18785.204ENSXETG00000014597pabpn17481.364Xenopus_tropicalis
ENSSFOG00015012565pabpn17783.721ENSXCOG00000005158pabpn18994.737Xiphophorus_couchianus
ENSSFOG00015012565pabpn110087.660ENSXMAG00000006196pabpn110088.936Xiphophorus_maculatus

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