EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015012582 (Gene tree)
Gene ID: 108926028
Gene Symbol: poldip3
Alias: -
Full Name: polymerase delta-interacting protein 3-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 5406 bases
Position: chrKV410851.1:789262-794667
Accession: 108926028
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015019593	RRM_1	PF00076.22	4.5e-09	1	1
ENSSFOP00015019566	RRM_1	PF00076.22	6.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015019793	-	2079	XM_018738455	ENSSFOP00015019566	489 (aa)	XP_018593971	A0A1W4Z0A8
ENSSFOT00015019820	-	1107	-	ENSSFOP00015019593	368 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015012582's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015012582's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015012582	poldip3	99	59.959	ENSSFOG00015012429	-	99	60.246

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015012582	poldip3	100	42.636	ENSG00000100227	POLDIP3	100	42.235	Homo_sapiens
ENSSFOG00015012582	poldip3	95	55.839	ENSAPOG00000021223	poldip3	99	56.042	Acanthochromis_polyacanthus
ENSSFOG00015012582	poldip3	100	41.588	ENSAMEG00000009522	POLDIP3	98	41.321	Ailuropoda_melanoleuca
ENSSFOG00015012582	poldip3	100	47.764	ENSACIG00000023100	poldip3	96	54.474	Amphilophus_citrinellus
ENSSFOG00015012582	poldip3	100	55.489	ENSAOCG00000004142	poldip3	100	55.489	Amphiprion_ocellaris
ENSSFOG00015012582	poldip3	100	55.090	ENSAPEG00000013658	poldip3	100	55.090	Amphiprion_percula
ENSSFOG00015012582	poldip3	85	65.789	ENSATEG00000009633	poldip3	99	52.686	Anabas_testudineus
ENSSFOG00015012582	poldip3	92	50.125	ENSAPLG00000005154	POLDIP3	92	49.752	Anas_platyrhynchos
ENSSFOG00015012582	poldip3	100	42.884	ENSACAG00000003515	POLDIP3	98	42.537	Anolis_carolinensis
ENSSFOG00015012582	poldip3	100	42.636	ENSANAG00000033566	-	100	42.264	Aotus_nancymaae
ENSSFOG00015012582	poldip3	60	50.794	ENSANAG00000024431	-	89	50.794	Aotus_nancymaae
ENSSFOG00015012582	poldip3	100	54.635	ENSACLG00000016753	poldip3	86	55.227	Astatotilapia_calliptera
ENSSFOG00015012582	poldip3	92	59.449	ENSAMXG00000007939	poldip3	100	53.893	Astyanax_mexicanus
ENSSFOG00015012582	poldip3	92	49.330	ENSBTAG00000016511	POLDIP3	100	41.085	Bos_taurus
ENSSFOG00015012582	poldip3	100	42.829	ENSCJAG00000009628	POLDIP3	100	41.996	Callithrix_jacchus
ENSSFOG00015012582	poldip3	100	42.105	ENSCAFG00000000959	POLDIP3	100	41.729	Canis_familiaris
ENSSFOG00015012582	poldip3	100	41.973	ENSCAFG00020000227	POLDIP3	100	41.586	Canis_lupus_dingo
ENSSFOG00015012582	poldip3	100	40.152	ENSCHIG00000020171	POLDIP3	100	40.832	Capra_hircus
ENSSFOG00015012582	poldip3	100	41.085	ENSTSYG00000007189	POLDIP3	100	41.321	Carlito_syrichta
ENSSFOG00015012582	poldip3	92	48.787	ENSCAPG00000006798	POLDIP3	91	49.057	Cavia_aperea
ENSSFOG00015012582	poldip3	100	40.901	ENSCPOG00000019524	POLDIP3	100	41.463	Cavia_porcellus
ENSSFOG00015012582	poldip3	100	42.829	ENSCCAG00000027969	-	100	42.424	Cebus_capucinus
ENSSFOG00015012582	poldip3	92	44.167	ENSCCAG00000011395	-	90	53.968	Cebus_capucinus
ENSSFOG00015012582	poldip3	100	42.442	ENSCATG00000029583	POLDIP3	100	41.199	Cercocebus_atys
ENSSFOG00015012582	poldip3	100	42.360	ENSCLAG00000016864	POLDIP3	100	42.389	Chinchilla_lanigera
ENSSFOG00015012582	poldip3	100	42.424	ENSCSAG00000005654	POLDIP3	100	41.210	Chlorocebus_sabaeus
ENSSFOG00015012582	poldip3	100	44.106	ENSCPBG00000021819	POLDIP3	87	43.939	Chrysemys_picta_bellii
ENSSFOG00015012582	poldip3	100	42.636	ENSCANG00000027664	POLDIP3	100	41.393	Colobus_angolensis_palliatus
ENSSFOG00015012582	poldip3	97	47.671	ENSCGRG00001004211	-	100	41.233	Cricetulus_griseus_chok1gshd
ENSSFOG00015012582	poldip3	97	47.671	ENSCGRG00000009374	-	91	48.229	Cricetulus_griseus_crigri
ENSSFOG00015012582	poldip3	100	52.811	ENSCSEG00000007165	poldip3	100	53.012	Cynoglossus_semilaevis
ENSSFOG00015012582	poldip3	88	59.696	ENSCVAG00000004370	poldip3	98	54.088	Cyprinodon_variegatus
ENSSFOG00015012582	poldip3	96	47.969	ENSDARG00000099375	poldip3	99	48.155	Danio_rerio
ENSSFOG00015012582	poldip3	100	57.895	ENSDNOG00000037211	-	86	57.895	Dasypus_novemcinctus
ENSSFOG00015012582	poldip3	100	42.075	ENSDORG00000006590	Poldip3	100	41.132	Dipodomys_ordii
ENSSFOG00015012582	poldip3	100	37.618	ENSETEG00000018022	POLDIP3	100	37.240	Echinops_telfairi
ENSSFOG00015012582	poldip3	92	37.433	ENSEBUG00000001181	poldip3	82	36.020	Eptatretus_burgeri
ENSSFOG00015012582	poldip3	100	42.344	ENSEASG00005000795	POLDIP3	100	41.966	Equus_asinus_asinus
ENSSFOG00015012582	poldip3	100	42.533	ENSECAG00000018350	POLDIP3	100	42.155	Equus_caballus
ENSSFOG00015012582	poldip3	100	56.911	ENSELUG00000009005	poldip3	90	56.619	Esox_lucius
ENSSFOG00015012582	poldip3	100	42.418	ENSFCAG00000032029	POLDIP3	100	41.495	Felis_catus
ENSSFOG00015012582	poldip3	100	44.275	ENSFALG00000011621	POLDIP3	86	44.847	Ficedula_albicollis
ENSSFOG00015012582	poldip3	100	42.155	ENSFDAG00000019550	POLDIP3	100	42.389	Fukomys_damarensis
ENSSFOG00015012582	poldip3	100	55.152	ENSFHEG00000006083	poldip3	100	55.888	Fundulus_heteroclitus
ENSSFOG00015012582	poldip3	100	47.379	ENSGMOG00000006232	poldip3	100	48.795	Gadus_morhua
ENSSFOG00015012582	poldip3	100	44.381	ENSGALG00000011863	POLDIP3	100	43.833	Gallus_gallus
ENSSFOG00015012582	poldip3	100	53.906	ENSGAFG00000017465	poldip3	100	54.688	Gambusia_affinis
ENSSFOG00015012582	poldip3	100	50.581	ENSGACG00000007224	poldip3	100	50.969	Gasterosteus_aculeatus
ENSSFOG00015012582	poldip3	100	44.867	ENSGAGG00000014629	POLDIP3	96	44.508	Gopherus_agassizii
ENSSFOG00015012582	poldip3	100	42.636	ENSGGOG00000014961	POLDIP3	100	42.235	Gorilla_gorilla
ENSSFOG00015012582	poldip3	100	54.241	ENSHBUG00000021806	poldip3	82	55.030	Haplochromis_burtoni
ENSSFOG00015012582	poldip3	100	42.256	ENSHGLG00000013156	POLDIP3	100	42.476	Heterocephalus_glaber_female
ENSSFOG00015012582	poldip3	100	42.256	ENSHGLG00100009086	POLDIP3	100	42.476	Heterocephalus_glaber_male
ENSSFOG00015012582	poldip3	100	50.000	ENSHCOG00000005823	poldip3	98	52.953	Hippocampus_comes
ENSSFOG00015012582	poldip3	93	63.839	ENSIPUG00000000564	poldip3	95	50.760	Ictalurus_punctatus
ENSSFOG00015012582	poldip3	92	48.138	ENSSTOG00000008230	POLDIP3	91	49.468	Ictidomys_tridecemlineatus
ENSSFOG00015012582	poldip3	100	40.891	ENSJJAG00000018034	Poldip3	100	40.301	Jaculus_jaculus
ENSSFOG00015012582	poldip3	100	53.045	ENSKMAG00000013839	poldip3	100	54.207	Kryptolebias_marmoratus
ENSSFOG00015012582	poldip3	100	42.235	ENSLAFG00000014901	POLDIP3	98	41.210	Loxodonta_africana
ENSSFOG00015012582	poldip3	100	42.636	ENSMFAG00000044670	POLDIP3	100	41.393	Macaca_fascicularis
ENSSFOG00015012582	poldip3	100	42.424	ENSMMUG00000047046	POLDIP3	100	41.210	Macaca_mulatta
ENSSFOG00015012582	poldip3	100	42.636	ENSMNEG00000037068	POLDIP3	100	41.393	Macaca_nemestrina
ENSSFOG00015012582	poldip3	100	55.511	ENSMAMG00000009151	poldip3	100	55.446	Mastacembelus_armatus
ENSSFOG00015012582	poldip3	100	54.043	ENSMZEG00005005201	poldip3	100	55.227	Maylandia_zebra
ENSSFOG00015012582	poldip3	97	45.868	ENSMGAG00000011986	POLDIP3	98	44.400	Meleagris_gallopavo
ENSSFOG00015012582	poldip3	92	41.985	ENSMAUG00000014002	Poldip3	88	42.494	Mesocricetus_auratus
ENSSFOG00015012582	poldip3	100	41.860	ENSMICG00000041767	POLDIP3	100	40.619	Microcebus_murinus
ENSSFOG00015012582	poldip3	100	41.667	ENSMOCG00000014101	Poldip3	100	41.313	Microtus_ochrogaster
ENSSFOG00015012582	poldip3	95	51.194	ENSMMOG00000004982	poldip3	99	78.182	Mola_mola
ENSSFOG00015012582	poldip3	92	47.990	ENSMODG00000006932	-	52	48.130	Monodelphis_domestica
ENSSFOG00015012582	poldip3	100	41.586	MGP_CAROLIEiJ_G0020093	Poldip3	100	41.199	Mus_caroli
ENSSFOG00015012582	poldip3	100	41.006	ENSMUSG00000041815	Poldip3	100	40.426	Mus_musculus
ENSSFOG00015012582	poldip3	100	41.586	MGP_PahariEiJ_G0020100	Poldip3	100	41.199	Mus_pahari
ENSSFOG00015012582	poldip3	100	41.006	MGP_SPRETEiJ_G0020991	Poldip3	100	40.426	Mus_spretus
ENSSFOG00015012582	poldip3	100	42.214	ENSMPUG00000016314	POLDIP3	100	41.839	Mustela_putorius_furo
ENSSFOG00015012582	poldip3	92	64.286	ENSMLUG00000012408	POLDIP3	88	46.500	Myotis_lucifugus
ENSSFOG00015012582	poldip3	100	42.940	ENSNGAG00000000210	Poldip3	100	42.553	Nannospalax_galili
ENSSFOG00015012582	poldip3	100	54.832	ENSNBRG00000001837	poldip3	100	55.424	Neolamprologus_brichardi
ENSSFOG00015012582	poldip3	100	42.636	ENSNLEG00000015950	POLDIP3	100	41.586	Nomascus_leucogenys
ENSSFOG00015012582	poldip3	92	52.632	ENSMEUG00000013932	POLDIP3	100	41.917	Notamacropus_eugenii
ENSSFOG00015012582	poldip3	94	48.813	ENSODEG00000014224	POLDIP3	100	42.226	Octodon_degus
ENSSFOG00015012582	poldip3	100	55.227	ENSONIG00000008367	poldip3	100	56.016	Oreochromis_niloticus
ENSSFOG00015012582	poldip3	92	48.232	ENSOANG00000011029	POLDIP3	88	49.118	Ornithorhynchus_anatinus
ENSSFOG00015012582	poldip3	100	42.992	ENSOCUG00000016133	POLDIP3	99	42.803	Oryctolagus_cuniculus
ENSSFOG00015012582	poldip3	100	53.707	ENSORLG00000014799	poldip3	100	54.309	Oryzias_latipes
ENSSFOG00015012582	poldip3	100	53.414	ENSORLG00020006113	poldip3	100	54.016	Oryzias_latipes_hni
ENSSFOG00015012582	poldip3	94	61.570	ENSORLG00015018234	poldip3	100	54.291	Oryzias_latipes_hsok
ENSSFOG00015012582	poldip3	100	55.268	ENSOMEG00000007071	poldip3	100	55.268	Oryzias_melastigma
ENSSFOG00015012582	poldip3	100	41.288	ENSOGAG00000008216	POLDIP3	100	40.076	Otolemur_garnettii
ENSSFOG00015012582	poldip3	100	40.152	ENSOARG00000018993	POLDIP3	100	40.643	Ovis_aries
ENSSFOG00015012582	poldip3	100	42.636	ENSPPAG00000036619	POLDIP3	100	42.235	Pan_paniscus
ENSSFOG00015012582	poldip3	100	42.418	ENSPPRG00000021188	POLDIP3	100	41.495	Panthera_pardus
ENSSFOG00015012582	poldip3	100	42.418	ENSPTIG00000021396	POLDIP3	100	41.495	Panthera_tigris_altaica
ENSSFOG00015012582	poldip3	100	42.636	ENSPTRG00000014460	POLDIP3	100	42.235	Pan_troglodytes
ENSSFOG00015012582	poldip3	100	42.636	ENSPANG00000007026	POLDIP3	100	41.393	Papio_anubis
ENSSFOG00015012582	poldip3	95	64.754	ENSPKIG00000002188	poldip3	94	55.000	Paramormyrops_kingsleyae
ENSSFOG00015012582	poldip3	94	68.936	ENSPKIG00000007231	poldip3	93	58.674	Paramormyrops_kingsleyae
ENSSFOG00015012582	poldip3	93	49.373	ENSPSIG00000006347	POLDIP3	95	47.017	Pelodiscus_sinensis
ENSSFOG00015012582	poldip3	100	41.463	ENSPEMG00000021065	Poldip3	100	40.561	Peromyscus_maniculatus_bairdii
ENSSFOG00015012582	poldip3	100	43.429	ENSPCIG00000026194	POLDIP3	100	43.048	Phascolarctos_cinereus
ENSSFOG00015012582	poldip3	100	54.241	ENSPFOG00000000926	poldip3	93	64.259	Poecilia_formosa
ENSSFOG00015012582	poldip3	100	54.475	ENSPLAG00000005558	poldip3	100	54.669	Poecilia_latipinna
ENSSFOG00015012582	poldip3	100	54.150	ENSPMEG00000018286	poldip3	100	54.348	Poecilia_mexicana
ENSSFOG00015012582	poldip3	100	53.204	ENSPREG00000016505	poldip3	100	53.786	Poecilia_reticulata
ENSSFOG00015012582	poldip3	100	42.424	ENSPPYG00000011899	POLDIP3	100	42.235	Pongo_abelii
ENSSFOG00015012582	poldip3	100	41.856	ENSPCAG00000009424	POLDIP3	100	41.698	Procavia_capensis
ENSSFOG00015012582	poldip3	100	42.054	ENSPCOG00000020271	POLDIP3	100	40.812	Propithecus_coquereli
ENSSFOG00015012582	poldip3	100	42.939	ENSPVAG00000014131	POLDIP3	100	42.366	Pteropus_vampyrus
ENSSFOG00015012582	poldip3	100	54.438	ENSPNYG00000020333	poldip3	100	55.227	Pundamilia_nyererei
ENSSFOG00015012582	poldip3	92	62.979	ENSPNAG00000023036	poldip3	100	57.087	Pygocentrus_nattereri
ENSSFOG00015012582	poldip3	100	40.832	ENSRNOG00000022877	Poldip3	100	40.113	Rattus_norvegicus
ENSSFOG00015012582	poldip3	100	42.636	ENSRBIG00000041676	POLDIP3	100	41.393	Rhinopithecus_bieti
ENSSFOG00015012582	poldip3	100	42.636	ENSRROG00000022379	POLDIP3	100	41.393	Rhinopithecus_roxellana
ENSSFOG00015012582	poldip3	100	42.829	ENSSBOG00000021779	-	100	42.453	Saimiri_boliviensis_boliviensis
ENSSFOG00015012582	poldip3	100	39.020	ENSSBOG00000025315	-	100	38.824	Saimiri_boliviensis_boliviensis
ENSSFOG00015012582	poldip3	100	43.478	ENSSHAG00000005316	POLDIP3	98	43.289	Sarcophilus_harrisii
ENSSFOG00015012582	poldip3	100	52.259	ENSSMAG00000004609	poldip3	94	63.180	Scophthalmus_maximus
ENSSFOG00015012582	poldip3	90	65.000	ENSSDUG00000016881	poldip3	100	55.556	Seriola_dumerili
ENSSFOG00015012582	poldip3	100	54.012	ENSSLDG00000024763	poldip3	100	54.795	Seriola_lalandi_dorsalis
ENSSFOG00015012582	poldip3	75	62.500	ENSSARG00000011587	POLDIP3	87	41.474	Sorex_araneus
ENSSFOG00015012582	poldip3	100	43.478	ENSSPUG00000005362	POLDIP3	96	43.126	Sphenodon_punctatus
ENSSFOG00015012582	poldip3	100	42.125	ENSSSCG00000000039	POLDIP3	100	41.321	Sus_scrofa
ENSSFOG00015012582	poldip3	100	45.057	ENSTGUG00000009622	-	98	44.867	Taeniopygia_guttata
ENSSFOG00015012582	poldip3	100	55.110	ENSTRUG00000006604	poldip3	100	55.110	Takifugu_rubripes
ENSSFOG00015012582	poldip3	95	52.381	ENSTNIG00000010841	poldip3	100	47.036	Tetraodon_nigroviridis
ENSSFOG00015012582	poldip3	100	42.045	ENSTBEG00000010978	POLDIP3	100	40.832	Tupaia_belangeri
ENSSFOG00015012582	poldip3	92	47.848	ENSTTRG00000015129	POLDIP3	92	47.848	Tursiops_truncatus
ENSSFOG00015012582	poldip3	100	42.669	ENSUAMG00000026181	POLDIP3	100	42.026	Ursus_americanus
ENSSFOG00015012582	poldip3	92	49.727	ENSUMAG00000020385	POLDIP3	87	50.549	Ursus_maritimus
ENSSFOG00015012582	poldip3	100	42.105	ENSVVUG00000002231	POLDIP3	100	41.729	Vulpes_vulpes
ENSSFOG00015012582	poldip3	100	42.193	ENSXETG00000013412	poldip3	100	41.912	Xenopus_tropicalis
ENSSFOG00015012582	poldip3	92	48.990	ENSXCOG00000015952	poldip3	98	50.123	Xiphophorus_couchianus
ENSSFOG00015012582	poldip3	100	53.502	ENSXMAG00000006152	poldip3	100	54.086	Xiphophorus_maculatus