EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015012621 (Gene tree)
Gene ID: 108926039
Gene Symbol: rrp7a
Alias: zgc:110084
Full Name: ribosomal RNA processing 7 homolog A
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 3554 bases
Position: chrKV410851.1:796242-799795
Accession: 108926039
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015019625	RRP7	PF12923.7	8.4e-33	1	1
ENSSFOP00015019615	RRP7	PF12923.7	1.2e-18	1	1
ENSSFOP00015019615	RRM_1	PF00076.22	3.1e-08	1	1
ENSSFOP00015019625	RRM_1	PF00076.22	3.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015019851	-	1422	XM_018738468	ENSSFOP00015019625	311 (aa)	XP_018593984	-
ENSSFOT00015019840	-	1545	-	ENSSFOP00015019615	289 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015012621's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015012621's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015012621	rrp7a	84	54.717	ENSG00000189306	RRP7A	93	55.472	Homo_sapiens
ENSSFOG00015012621	rrp7a	89	65.248	ENSAPOG00000021250	rrp7a	100	67.730	Acanthochromis_polyacanthus
ENSSFOG00015012621	rrp7a	84	54.717	ENSAMEG00000009503	RRP7A	93	56.015	Ailuropoda_melanoleuca
ENSSFOG00015012621	rrp7a	89	68.198	ENSACIG00000023067	rrp7a	100	68.198	Amphilophus_citrinellus
ENSSFOG00015012621	rrp7a	89	67.730	ENSAOCG00000004115	rrp7a	100	69.504	Amphiprion_ocellaris
ENSSFOG00015012621	rrp7a	89	68.440	ENSAPEG00000013688	rrp7a	100	70.213	Amphiprion_percula
ENSSFOG00015012621	rrp7a	89	68.794	ENSATEG00000009664	rrp7a	100	69.858	Anabas_testudineus
ENSSFOG00015012621	rrp7a	89	55.160	ENSACAG00000003579	RRP7A	100	55.160	Anolis_carolinensis
ENSSFOG00015012621	rrp7a	88	53.261	ENSANAG00000031200	RRP7A	97	53.986	Aotus_nancymaae
ENSSFOG00015012621	rrp7a	89	69.858	ENSACLG00000016790	rrp7a	100	70.213	Astatotilapia_calliptera
ENSSFOG00015012621	rrp7a	92	63.448	ENSAMXG00000007921	rrp7a	99	65.172	Astyanax_mexicanus
ENSSFOG00015012621	rrp7a	84	52.471	ENSBTAG00000016510	RRP7A	93	53.232	Bos_taurus
ENSSFOG00015012621	rrp7a	84	53.962	ENSCJAG00000009668	RRP7A	97	53.261	Callithrix_jacchus
ENSSFOG00015012621	rrp7a	84	54.340	ENSCAFG00000000965	RRP7	93	55.094	Canis_familiaris
ENSSFOG00015012621	rrp7a	84	54.340	ENSCAFG00020000251	RRP7A	93	55.094	Canis_lupus_dingo
ENSSFOG00015012621	rrp7a	84	53.232	ENSCHIG00000026787	RRP7A	93	53.992	Capra_hircus
ENSSFOG00015012621	rrp7a	84	52.652	ENSTSYG00000000198	RRP7A	97	52.364	Carlito_syrichta
ENSSFOG00015012621	rrp7a	84	53.585	ENSCAPG00000002325	RRP7A	100	53.585	Cavia_aperea
ENSSFOG00015012621	rrp7a	84	53.962	ENSCPOG00000030547	RRP7A	93	53.962	Cavia_porcellus
ENSSFOG00015012621	rrp7a	67	56.872	ENSCCAG00000021486	RRP7A	90	56.872	Cebus_capucinus
ENSSFOG00015012621	rrp7a	84	55.472	ENSCLAG00000016715	RRP7A	93	55.472	Chinchilla_lanigera
ENSSFOG00015012621	rrp7a	84	54.340	ENSCSAG00000005657	RRP7A	93	55.094	Chlorocebus_sabaeus
ENSSFOG00015012621	rrp7a	89	52.857	ENSCPBG00000021814	RRP7A	100	53.737	Chrysemys_picta_bellii
ENSSFOG00015012621	rrp7a	71	40.351	ENSCSAVG00000002555	-	85	40.351	Ciona_savignyi
ENSSFOG00015012621	rrp7a	58	66.667	ENSCGRG00001021873	-	93	66.667	Cricetulus_griseus_chok1gshd
ENSSFOG00015012621	rrp7a	73	50.877	ENSCGRG00001005713	-	99	51.754	Cricetulus_griseus_chok1gshd
ENSSFOG00015012621	rrp7a	82	46.512	ENSCGRG00000000540	-	100	47.287	Cricetulus_griseus_crigri
ENSSFOG00015012621	rrp7a	84	52.830	ENSCGRG00000009567	-	93	53.585	Cricetulus_griseus_crigri
ENSSFOG00015012621	rrp7a	89	46.786	ENSCGRG00000000552	-	98	47.500	Cricetulus_griseus_crigri
ENSSFOG00015012621	rrp7a	89	66.312	ENSCSEG00000007185	rrp7a	100	68.794	Cynoglossus_semilaevis
ENSSFOG00015012621	rrp7a	89	68.085	ENSCVAG00000004349	rrp7a	100	70.922	Cyprinodon_variegatus
ENSSFOG00015012621	rrp7a	89	59.364	ENSDARG00000098934	rrp7a	100	60.777	Danio_rerio
ENSSFOG00015012621	rrp7a	91	52.797	ENSDNOG00000037442	RRP7A	92	52.797	Dasypus_novemcinctus
ENSSFOG00015012621	rrp7a	89	51.773	ENSDORG00000016138	Rrp7a	99	52.482	Dipodomys_ordii
ENSSFOG00015012621	rrp7a	84	32.103	FBgn0031764	CG9107	98	32.103	Drosophila_melanogaster
ENSSFOG00015012621	rrp7a	82	53.876	ENSETEG00000018025	RRP7A	100	53.876	Echinops_telfairi
ENSSFOG00015012621	rrp7a	85	44.906	ENSEBUG00000010231	rrp7a	91	44.906	Eptatretus_burgeri
ENSSFOG00015012621	rrp7a	84	54.340	ENSEASG00005000804	RRP7A	93	54.717	Equus_asinus_asinus
ENSSFOG00015012621	rrp7a	84	54.717	ENSECAG00000015168	RRP7	93	55.094	Equus_caballus
ENSSFOG00015012621	rrp7a	89	68.327	ENSELUG00000009036	rrp7a	100	68.683	Esox_lucius
ENSSFOG00015012621	rrp7a	86	51.471	ENSFCAG00000033258	RRP7A	75	52.206	Felis_catus
ENSSFOG00015012621	rrp7a	82	54.264	ENSFALG00000011635	RRP7A	88	53.232	Ficedula_albicollis
ENSSFOG00015012621	rrp7a	84	53.962	ENSFDAG00000001321	RRP7A	94	54.340	Fukomys_damarensis
ENSSFOG00015012621	rrp7a	91	67.247	ENSFHEG00000006098	rrp7a	98	67.247	Fundulus_heteroclitus
ENSSFOG00015012621	rrp7a	85	61.940	ENSGMOG00000006218	rrp7a	99	62.687	Gadus_morhua
ENSSFOG00015012621	rrp7a	84	54.545	ENSGALG00000011866	RRP7A	96	54.545	Gallus_gallus
ENSSFOG00015012621	rrp7a	89	68.440	ENSGAFG00000017459	rrp7a	100	68.440	Gambusia_affinis
ENSSFOG00015012621	rrp7a	85	62.687	ENSGACG00000007212	rrp7a	99	63.433	Gasterosteus_aculeatus
ENSSFOG00015012621	rrp7a	84	54.167	ENSGAGG00000014621	RRP7A	94	54.167	Gopherus_agassizii
ENSSFOG00015012621	rrp7a	84	54.340	ENSGGOG00000014957	RRP7A	93	55.094	Gorilla_gorilla
ENSSFOG00015012621	rrp7a	89	70.213	ENSHBUG00000021788	rrp7a	100	70.567	Haplochromis_burtoni
ENSSFOG00015012621	rrp7a	86	54.044	ENSHGLG00000015706	RRP7A	95	54.044	Heterocephalus_glaber_female
ENSSFOG00015012621	rrp7a	84	52.830	ENSHGLG00100008187	-	94	53.208	Heterocephalus_glaber_male
ENSSFOG00015012621	rrp7a	84	51.698	ENSHGLG00100009556	-	93	51.698	Heterocephalus_glaber_male
ENSSFOG00015012621	rrp7a	89	60.071	ENSHCOG00000005813	rrp7a	88	62.544	Hippocampus_comes
ENSSFOG00015012621	rrp7a	89	66.548	ENSIPUG00000000556	rrp7a	100	66.904	Ictalurus_punctatus
ENSSFOG00015012621	rrp7a	84	55.849	ENSSTOG00000003111	RRP7A	93	55.849	Ictidomys_tridecemlineatus
ENSSFOG00015012621	rrp7a	84	52.830	ENSJJAG00000019486	Rrp7a	97	52.536	Jaculus_jaculus
ENSSFOG00015012621	rrp7a	89	66.312	ENSKMAG00000013819	rrp7a	100	67.730	Kryptolebias_marmoratus
ENSSFOG00015012621	rrp7a	84	53.992	ENSLACG00000002670	RRP7A	96	54.753	Latimeria_chalumnae
ENSSFOG00015012621	rrp7a	88	52.727	ENSLAFG00000012447	RRP7A	97	52.727	Loxodonta_africana
ENSSFOG00015012621	rrp7a	84	53.962	ENSMFAG00000042855	RRP7A	93	54.717	Macaca_fascicularis
ENSSFOG00015012621	rrp7a	84	50.566	ENSMFAG00000041664	-	93	51.321	Macaca_fascicularis
ENSSFOG00015012621	rrp7a	84	47.710	ENSMMUG00000009716	RRP7A	97	46.520	Macaca_mulatta
ENSSFOG00015012621	rrp7a	84	52.453	ENSMMUG00000010193	-	93	53.208	Macaca_mulatta
ENSSFOG00015012621	rrp7a	84	54.717	ENSMNEG00000033705	RRP7A	93	55.472	Macaca_nemestrina
ENSSFOG00015012621	rrp7a	84	50.943	ENSMLEG00000040230	RRP7A	99	51.698	Mandrillus_leucophaeus
ENSSFOG00015012621	rrp7a	89	66.667	ENSMAMG00000009125	rrp7a	100	68.085	Mastacembelus_armatus
ENSSFOG00015012621	rrp7a	89	69.858	ENSMZEG00005005197	rrp7a	100	70.213	Maylandia_zebra
ENSSFOG00015012621	rrp7a	83	54.826	ENSMGAG00000011980	RRP7A	100	54.826	Meleagris_gallopavo
ENSSFOG00015012621	rrp7a	84	53.962	ENSMICG00000041800	RRP7A	97	52.536	Microcebus_murinus
ENSSFOG00015012621	rrp7a	89	62.278	ENSMMOG00000004976	rrp7a	100	65.836	Mola_mola
ENSSFOG00015012621	rrp7a	84	52.222	ENSMODG00000006914	RRP7A	93	52.222	Monodelphis_domestica
ENSSFOG00015012621	rrp7a	89	67.376	ENSMALG00000001933	rrp7a	100	68.794	Monopterus_albus
ENSSFOG00015012621	rrp7a	86	51.661	MGP_CAROLIEiJ_G0020092	Rrp7a	100	50.704	Mus_caroli
ENSSFOG00015012621	rrp7a	86	51.661	ENSMUSG00000018040	Rrp7a	84	76.744	Mus_musculus
ENSSFOG00015012621	rrp7a	86	50.923	MGP_PahariEiJ_G0020099	Rrp7a	95	50.923	Mus_pahari
ENSSFOG00015012621	rrp7a	86	51.661	MGP_SPRETEiJ_G0020990	Rrp7a	95	51.661	Mus_spretus
ENSSFOG00015012621	rrp7a	86	53.137	ENSMPUG00000016315	RRP7A	95	53.875	Mustela_putorius_furo
ENSSFOG00015012621	rrp7a	84	53.962	ENSMLUG00000012404	RRP7A	97	53.623	Myotis_lucifugus
ENSSFOG00015012621	rrp7a	84	52.075	ENSNGAG00000010039	Rrp7a	93	52.830	Nannospalax_galili
ENSSFOG00015012621	rrp7a	89	70.107	ENSNBRG00000001824	rrp7a	100	70.463	Neolamprologus_brichardi
ENSSFOG00015012621	rrp7a	87	53.114	ENSNLEG00000036258	RRP7A	97	53.623	Nomascus_leucogenys
ENSSFOG00015012621	rrp7a	84	56.226	ENSODEG00000015126	RRP7A	93	56.226	Octodon_degus
ENSSFOG00015012621	rrp7a	89	70.671	ENSONIG00000008364	rrp7a	100	71.025	Oreochromis_niloticus
ENSSFOG00015012621	rrp7a	82	47.479	ENSOANG00000015007	RRP7A	86	48.291	Ornithorhynchus_anatinus
ENSSFOG00015012621	rrp7a	87	47.826	ENSOCUG00000027434	RRP7A	97	47.273	Oryctolagus_cuniculus
ENSSFOG00015012621	rrp7a	89	64.184	ENSORLG00000014826	rrp7a	100	65.603	Oryzias_latipes
ENSSFOG00015012621	rrp7a	89	63.830	ENSORLG00020006078	rrp7a	100	65.248	Oryzias_latipes_hni
ENSSFOG00015012621	rrp7a	89	63.830	ENSORLG00015018190	rrp7a	100	64.894	Oryzias_latipes_hsok
ENSSFOG00015012621	rrp7a	88	61.871	ENSOMEG00000007090	rrp7a	99	64.748	Oryzias_melastigma
ENSSFOG00015012621	rrp7a	88	52.000	ENSOGAG00000002857	RRP7A	97	53.261	Otolemur_garnettii
ENSSFOG00015012621	rrp7a	84	53.232	ENSOARG00000018986	RRP7A	93	53.992	Ovis_aries
ENSSFOG00015012621	rrp7a	68	51.174	ENSPPAG00000029825	-	85	52.113	Pan_paniscus
ENSSFOG00015012621	rrp7a	68	55.093	ENSPPAG00000021416	-	77	56.019	Pan_paniscus
ENSSFOG00015012621	rrp7a	86	52.206	ENSPPRG00000022185	RRP7A	96	52.574	Panthera_pardus
ENSSFOG00015012621	rrp7a	86	38.462	ENSPTIG00000020965	RRP7A	95	38.321	Panthera_tigris_altaica
ENSSFOG00015012621	rrp7a	84	54.340	ENSPANG00000025354	-	93	55.094	Papio_anubis
ENSSFOG00015012621	rrp7a	84	52.290	ENSPANG00000032001	-	93	53.053	Papio_anubis
ENSSFOG00015012621	rrp7a	91	72.125	ENSPKIG00000007209	rrp7a	87	72.125	Paramormyrops_kingsleyae
ENSSFOG00015012621	rrp7a	82	55.814	ENSPSIG00000007988	RRP7A	97	55.985	Pelodiscus_sinensis
ENSSFOG00015012621	rrp7a	83	54.864	ENSPMGG00000009485	rrp7a	91	58.366	Periophthalmus_magnuspinnatus
ENSSFOG00015012621	rrp7a	89	51.246	ENSPEMG00000022265	Rrp7a	99	51.957	Peromyscus_maniculatus_bairdii
ENSSFOG00015012621	rrp7a	86	49.259	ENSPMAG00000002823	rrp7a	97	49.259	Petromyzon_marinus
ENSSFOG00015012621	rrp7a	84	52.273	ENSPCIG00000026195	RRP7A	97	51.812	Phascolarctos_cinereus
ENSSFOG00015012621	rrp7a	89	67.376	ENSPFOG00000001042	rrp7a	100	70.213	Poecilia_formosa
ENSSFOG00015012621	rrp7a	54	69.186	ENSPLAG00000009537	rrp7a	72	70.930	Poecilia_latipinna
ENSSFOG00015012621	rrp7a	54	69.186	ENSPLAG00000010787	-	72	70.930	Poecilia_latipinna
ENSSFOG00015012621	rrp7a	89	67.730	ENSPMEG00000018204	rrp7a	100	70.567	Poecilia_mexicana
ENSSFOG00015012621	rrp7a	89	66.312	ENSPREG00000016492	rrp7a	100	69.149	Poecilia_reticulata
ENSSFOG00015012621	rrp7a	84	53.962	ENSPPYG00000011897	RRP7A	93	54.717	Pongo_abelii
ENSSFOG00015012621	rrp7a	84	53.585	ENSPCOG00000014018	RRP7A	93	54.340	Propithecus_coquereli
ENSSFOG00015012621	rrp7a	81	50.000	ENSPVAG00000003330	RRP7A	92	50.847	Pteropus_vampyrus
ENSSFOG00015012621	rrp7a	89	69.858	ENSPNYG00000020343	rrp7a	100	70.213	Pundamilia_nyererei
ENSSFOG00015012621	rrp7a	89	69.751	ENSPNAG00000014376	rrp7a	100	69.751	Pygocentrus_nattereri
ENSSFOG00015012621	rrp7a	84	50.943	ENSRNOG00000022896	Rrp7a	93	51.698	Rattus_norvegicus
ENSSFOG00015012621	rrp7a	84	49.430	ENSRBIG00000040358	RRP7A	93	49.430	Rhinopithecus_bieti
ENSSFOG00015012621	rrp7a	84	53.383	ENSRROG00000036754	RRP7A	93	54.135	Rhinopithecus_roxellana
ENSSFOG00015012621	rrp7a	84	53.585	ENSSBOG00000009234	RRP7A	97	52.899	Saimiri_boliviensis_boliviensis
ENSSFOG00015012621	rrp7a	67	54.545	ENSSHAG00000005715	RRP7A	99	55.714	Sarcophilus_harrisii
ENSSFOG00015012621	rrp7a	89	66.667	ENSSMAG00000004593	rrp7a	100	66.667	Scophthalmus_maximus
ENSSFOG00015012621	rrp7a	89	67.376	ENSSDUG00000016921	rrp7a	100	68.794	Seriola_dumerili
ENSSFOG00015012621	rrp7a	89	67.376	ENSSLDG00000024758	rrp7a	100	68.794	Seriola_lalandi_dorsalis
ENSSFOG00015012621	rrp7a	55	71.429	ENSSARG00000002133	-	66	71.429	Sorex_araneus
ENSSFOG00015012621	rrp7a	86	50.800	ENSSPUG00000005373	RRP7A	99	52.191	Sphenodon_punctatus
ENSSFOG00015012621	rrp7a	89	66.667	ENSSPAG00000016048	rrp7a	100	67.021	Stegastes_partitus
ENSSFOG00015012621	rrp7a	86	52.768	ENSSSCG00000033983	RRP7A	97	52.174	Sus_scrofa
ENSSFOG00015012621	rrp7a	82	54.651	ENSTGUG00000009647	RRP7A	100	54.651	Taeniopygia_guttata
ENSSFOG00015012621	rrp7a	89	65.957	ENSTRUG00000024726	rrp7a	100	65.957	Takifugu_rubripes
ENSSFOG00015012621	rrp7a	89	66.784	ENSTNIG00000010842	rrp7a	100	66.784	Tetraodon_nigroviridis
ENSSFOG00015012621	rrp7a	87	53.285	ENSUAMG00000026180	RRP7A	96	54.015	Ursus_americanus
ENSSFOG00015012621	rrp7a	87	51.095	ENSUMAG00000020394	RRP7A	96	51.825	Ursus_maritimus
ENSSFOG00015012621	rrp7a	83	54.231	ENSVVUG00000002248	-	65	55.000	Vulpes_vulpes
ENSSFOG00015012621	rrp7a	84	51.321	ENSXETG00000013414	rrp7a	96	51.698	Xenopus_tropicalis
ENSSFOG00015012621	rrp7a	89	65.724	ENSXCOG00000015955	rrp7a	100	67.138	Xiphophorus_couchianus
ENSSFOG00015012621	rrp7a	89	66.312	ENSXMAG00000006165	rrp7a	100	67.730	Xiphophorus_maculatus