EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015012753 (Gene tree)
Gene ID: 108920615
Gene Symbol: ercc3
Alias: wu:fc25f08|xpb
Full Name: ERCC excision repair 3%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 7409 bases
Position: chrKV411295.1:410012-417420
Accession: 108920615
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015019853	ResIII	PF04851.15	8.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015020081	-	3563	XM_018729502	ENSSFOP00015019853	783 (aa)	XP_018585018	A0A1W4Y9Q0

Gene Model

Click here to download ENSSFOG00015012753's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03022	Basal transcription factors	KEGG
sfm03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015012753's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015012753	ercc3	100	87.771	ENSG00000163161	ERCC3	99	96.273	Homo_sapiens
ENSSFOG00015012753	ercc3	100	91.210	ENSAPOG00000014383	ercc3	97	92.470	Acanthochromis_polyacanthus
ENSSFOG00015012753	ercc3	100	86.879	ENSAMEG00000016840	ERCC3	96	88.477	Ailuropoda_melanoleuca
ENSSFOG00015012753	ercc3	99	89.677	ENSACIG00000000126	ercc3	98	91.005	Amphilophus_citrinellus
ENSSFOG00015012753	ercc3	100	90.434	ENSAOCG00000009396	ercc3	97	91.667	Amphiprion_ocellaris
ENSSFOG00015012753	ercc3	100	90.306	ENSAPEG00000023077	ercc3	97	91.534	Amphiprion_percula
ENSSFOG00015012753	ercc3	100	90.561	ENSATEG00000014860	ercc3	96	92.053	Anabas_testudineus
ENSSFOG00015012753	ercc3	91	88.451	ENSAPLG00000012068	ERCC3	98	88.451	Anas_platyrhynchos
ENSSFOG00015012753	ercc3	92	88.350	ENSACAG00000009919	ERCC3	100	88.350	Anolis_carolinensis
ENSSFOG00015012753	ercc3	100	87.898	ENSANAG00000031091	ERCC3	96	89.139	Aotus_nancymaae
ENSSFOG00015012753	ercc3	100	90.306	ENSACLG00000022508	ercc3	97	91.667	Astatotilapia_calliptera
ENSSFOG00015012753	ercc3	100	90.421	ENSAMXG00000036947	ercc3	98	91.503	Astyanax_mexicanus
ENSSFOG00015012753	ercc3	100	87.261	ENSBTAG00000020777	ERCC3	96	88.477	Bos_taurus
ENSSFOG00015012753	ercc3	99	61.625	WBGene00013441	xpb-1	97	62.982	Caenorhabditis_elegans
ENSSFOG00015012753	ercc3	100	87.771	ENSCJAG00000010416	ERCC3	96	89.007	Callithrix_jacchus
ENSSFOG00015012753	ercc3	96	88.609	ENSCAFG00000004497	ERCC3	97	88.609	Canis_familiaris
ENSSFOG00015012753	ercc3	96	88.609	ENSCAFG00020003495	ERCC3	97	88.609	Canis_lupus_dingo
ENSSFOG00015012753	ercc3	100	87.389	ENSCHIG00000014551	ERCC3	96	88.742	Capra_hircus
ENSSFOG00015012753	ercc3	99	87.371	ENSTSYG00000004137	ERCC3	97	88.212	Carlito_syrichta
ENSSFOG00015012753	ercc3	78	79.608	ENSCAPG00000017027	ERCC3	93	79.608	Cavia_aperea
ENSSFOG00015012753	ercc3	100	86.242	ENSCPOG00000002144	ERCC3	96	87.417	Cavia_porcellus
ENSSFOG00015012753	ercc3	100	87.771	ENSCCAG00000024421	ERCC3	96	89.007	Cebus_capucinus
ENSSFOG00015012753	ercc3	100	87.771	ENSCATG00000032313	ERCC3	96	89.007	Cercocebus_atys
ENSSFOG00015012753	ercc3	100	87.134	ENSCLAG00000002965	ERCC3	92	88.344	Chinchilla_lanigera
ENSSFOG00015012753	ercc3	100	87.643	ENSCSAG00000016827	ERCC3	96	88.874	Chlorocebus_sabaeus
ENSSFOG00015012753	ercc3	83	94.737	ENSCHOG00000007414	ERCC3	79	94.737	Choloepus_hoffmanni
ENSSFOG00015012753	ercc3	92	89.182	ENSCPBG00000013638	ERCC3	100	89.182	Chrysemys_picta_bellii
ENSSFOG00015012753	ercc3	96	71.578	ENSCING00000002867	ercc3	96	71.578	Ciona_intestinalis
ENSSFOG00015012753	ercc3	100	87.771	ENSCANG00000007094	ERCC3	96	89.007	Colobus_angolensis_palliatus
ENSSFOG00015012753	ercc3	100	87.516	ENSCGRG00001009426	Ercc3	96	88.742	Cricetulus_griseus_chok1gshd
ENSSFOG00015012753	ercc3	97	87.648	ENSCGRG00000015547	Ercc3	96	88.919	Cricetulus_griseus_crigri
ENSSFOG00015012753	ercc3	100	88.280	ENSCSEG00000016479	ercc3	98	89.179	Cynoglossus_semilaevis
ENSSFOG00015012753	ercc3	96	90.596	ENSCVAG00000015177	ercc3	96	90.596	Cyprinodon_variegatus
ENSSFOG00015012753	ercc3	96	92.583	ENSDARG00000002402	ercc3	98	92.157	Danio_rerio
ENSSFOG00015012753	ercc3	56	92.534	ENSDNOG00000035027	ERCC3	95	92.534	Dasypus_novemcinctus
ENSSFOG00015012753	ercc3	96	88.874	ENSDORG00000004671	Ercc3	97	88.874	Dipodomys_ordii
ENSSFOG00015012753	ercc3	99	66.917	FBgn0001179	hay	94	69.069	Drosophila_melanogaster
ENSSFOG00015012753	ercc3	90	88.535	ENSETEG00000019887	ERCC3	86	88.535	Echinops_telfairi
ENSSFOG00015012753	ercc3	100	79.319	ENSEBUG00000009773	ercc3	95	81.770	Eptatretus_burgeri
ENSSFOG00015012753	ercc3	100	84.720	ENSEASG00005022466	ERCC3	93	88.697	Equus_asinus_asinus
ENSSFOG00015012753	ercc3	100	87.516	ENSECAG00000006589	ERCC3	96	88.609	Equus_caballus
ENSSFOG00015012753	ercc3	90	89.170	ENSEEUG00000001057	ERCC3	97	89.170	Erinaceus_europaeus
ENSSFOG00015012753	ercc3	100	88.917	ENSELUG00000000089	ercc3	97	89.831	Esox_lucius
ENSSFOG00015012753	ercc3	100	87.389	ENSFCAG00000006989	ERCC3	96	88.609	Felis_catus
ENSSFOG00015012753	ercc3	99	85.972	ENSFALG00000003936	ERCC3	97	86.554	Ficedula_albicollis
ENSSFOG00015012753	ercc3	100	87.006	ENSFDAG00000011924	ERCC3	96	88.212	Fukomys_damarensis
ENSSFOG00015012753	ercc3	100	88.520	ENSFHEG00000005185	ercc3	96	90.066	Fundulus_heteroclitus
ENSSFOG00015012753	ercc3	100	87.484	ENSGMOG00000018032	ercc3	96	89.125	Gadus_morhua
ENSSFOG00015012753	ercc3	96	87.550	ENSGALG00000011515	ERCC3	97	87.550	Gallus_gallus
ENSSFOG00015012753	ercc3	100	89.286	ENSGAFG00000011936	ercc3	96	90.861	Gambusia_affinis
ENSSFOG00015012753	ercc3	100	89.299	ENSGACG00000015218	ercc3	99	90.371	Gasterosteus_aculeatus
ENSSFOG00015012753	ercc3	92	89.043	ENSGAGG00000018579	ERCC3	100	89.043	Gopherus_agassizii
ENSSFOG00015012753	ercc3	100	87.771	ENSGGOG00000015255	ERCC3	96	89.007	Gorilla_gorilla
ENSSFOG00015012753	ercc3	100	90.306	ENSHBUG00000003818	ercc3	97	91.667	Haplochromis_burtoni
ENSSFOG00015012753	ercc3	100	86.879	ENSHGLG00000011014	ERCC3	96	88.079	Heterocephalus_glaber_female
ENSSFOG00015012753	ercc3	100	86.879	ENSHGLG00100013806	ERCC3	96	88.079	Heterocephalus_glaber_male
ENSSFOG00015012753	ercc3	100	89.031	ENSHCOG00000016924	ercc3	97	90.476	Hippocampus_comes
ENSSFOG00015012753	ercc3	99	90.488	ENSIPUG00000021000	ercc3	98	91.503	Ictalurus_punctatus
ENSSFOG00015012753	ercc3	100	87.643	ENSSTOG00000011001	ERCC3	96	88.742	Ictidomys_tridecemlineatus
ENSSFOG00015012753	ercc3	90	87.571	ENSJJAG00000001117	Ercc3	100	87.571	Jaculus_jaculus
ENSSFOG00015012753	ercc3	100	89.158	ENSKMAG00000021764	ercc3	96	90.861	Kryptolebias_marmoratus
ENSSFOG00015012753	ercc3	100	90.561	ENSLBEG00000000468	ercc3	96	91.788	Labrus_bergylta
ENSSFOG00015012753	ercc3	96	83.943	ENSLACG00000014815	ERCC3	96	83.943	Latimeria_chalumnae
ENSSFOG00015012753	ercc3	90	87.129	ENSLOCG00000010907	ercc3	87	87.129	Lepisosteus_oculatus
ENSSFOG00015012753	ercc3	100	87.389	ENSLAFG00000014866	ERCC3	97	87.843	Loxodonta_africana
ENSSFOG00015012753	ercc3	100	87.771	ENSMFAG00000003370	ERCC3	96	89.007	Macaca_fascicularis
ENSSFOG00015012753	ercc3	100	84.025	ENSMNEG00000004215	ERCC3	91	90.323	Macaca_nemestrina
ENSSFOG00015012753	ercc3	100	87.771	ENSMLEG00000042061	ERCC3	96	89.007	Mandrillus_leucophaeus
ENSSFOG00015012753	ercc3	100	90.038	ENSMAMG00000004505	ercc3	96	91.512	Mastacembelus_armatus
ENSSFOG00015012753	ercc3	100	90.306	ENSMZEG00005004854	ercc3	97	91.667	Maylandia_zebra
ENSSFOG00015012753	ercc3	90	88.119	ENSMGAG00000011706	ERCC3	100	88.119	Meleagris_gallopavo
ENSSFOG00015012753	ercc3	100	87.532	ENSMAUG00000004515	Ercc3	96	88.757	Mesocricetus_auratus
ENSSFOG00015012753	ercc3	100	87.516	ENSMICG00000009578	ERCC3	96	88.609	Microcebus_murinus
ENSSFOG00015012753	ercc3	100	87.389	ENSMOCG00000021767	Ercc3	96	88.609	Microtus_ochrogaster
ENSSFOG00015012753	ercc3	99	89.508	ENSMMOG00000018174	ercc3	96	90.464	Mola_mola
ENSSFOG00015012753	ercc3	96	89.272	ENSMODG00000018695	ERCC3	96	89.272	Monodelphis_domestica
ENSSFOG00015012753	ercc3	99	90.000	ENSMALG00000014944	ercc3	97	91.270	Monopterus_albus
ENSSFOG00015012753	ercc3	100	87.516	MGP_CAROLIEiJ_G0022075	Ercc3	96	88.742	Mus_caroli
ENSSFOG00015012753	ercc3	100	88.041	ENSMUSG00000024382	Ercc3	96	89.286	Mus_musculus
ENSSFOG00015012753	ercc3	100	87.389	MGP_PahariEiJ_G0018809	Ercc3	96	88.609	Mus_pahari
ENSSFOG00015012753	ercc3	100	87.913	MGP_SPRETEiJ_G0022987	Ercc3	96	89.153	Mus_spretus
ENSSFOG00015012753	ercc3	100	87.134	ENSMPUG00000012021	ERCC3	96	88.212	Mustela_putorius_furo
ENSSFOG00015012753	ercc3	93	85.048	ENSMLUG00000007429	ERCC3	99	85.048	Myotis_lucifugus
ENSSFOG00015012753	ercc3	97	86.632	ENSNGAG00000019598	Ercc3	96	90.523	Nannospalax_galili
ENSSFOG00015012753	ercc3	100	90.306	ENSNBRG00000019074	ercc3	97	91.667	Neolamprologus_brichardi
ENSSFOG00015012753	ercc3	92	86.806	ENSNLEG00000015665	ERCC3	97	86.806	Nomascus_leucogenys
ENSSFOG00015012753	ercc3	100	84.968	ENSOPRG00000004553	ERCC3	96	86.358	Ochotona_princeps
ENSSFOG00015012753	ercc3	100	87.643	ENSODEG00000005795	ERCC3	96	88.874	Octodon_degus
ENSSFOG00015012753	ercc3	100	90.306	ENSONIG00000003255	ercc3	97	91.534	Oreochromis_niloticus
ENSSFOG00015012753	ercc3	100	87.898	ENSOCUG00000002248	ERCC3	96	89.139	Oryctolagus_cuniculus
ENSSFOG00015012753	ercc3	100	88.776	ENSORLG00000004393	ercc3	96	90.464	Oryzias_latipes
ENSSFOG00015012753	ercc3	100	88.903	ENSORLG00020017718	ercc3	95	91.690	Oryzias_latipes_hni
ENSSFOG00015012753	ercc3	100	88.648	ENSORLG00015015695	ercc3	96	90.199	Oryzias_latipes_hsok
ENSSFOG00015012753	ercc3	100	89.541	ENSOMEG00000015374	ercc3	97	90.873	Oryzias_melastigma
ENSSFOG00015012753	ercc3	100	87.548	ENSOGAG00000009103	ERCC3	96	88.639	Otolemur_garnettii
ENSSFOG00015012753	ercc3	100	87.261	ENSOARG00000016147	ERCC3	96	88.742	Ovis_aries
ENSSFOG00015012753	ercc3	100	87.771	ENSPPAG00000036166	ERCC3	96	89.007	Pan_paniscus
ENSSFOG00015012753	ercc3	100	87.516	ENSPPRG00000001305	ERCC3	96	88.742	Panthera_pardus
ENSSFOG00015012753	ercc3	92	88.904	ENSPTIG00000016969	ERCC3	100	88.904	Panthera_tigris_altaica
ENSSFOG00015012753	ercc3	100	87.771	ENSPTRG00000046940	ERCC3	96	89.007	Pan_troglodytes
ENSSFOG00015012753	ercc3	100	87.771	ENSPANG00000007699	ERCC3	96	89.007	Papio_anubis
ENSSFOG00015012753	ercc3	100	93.742	ENSPKIG00000001319	ercc3	100	94.305	Paramormyrops_kingsleyae
ENSSFOG00015012753	ercc3	92	88.488	ENSPSIG00000014682	ERCC3	100	88.488	Pelodiscus_sinensis
ENSSFOG00015012753	ercc3	96	90.849	ENSPMGG00000017885	ercc3	96	90.849	Periophthalmus_magnuspinnatus
ENSSFOG00015012753	ercc3	100	87.516	ENSPEMG00000013733	Ercc3	96	88.742	Peromyscus_maniculatus_bairdii
ENSSFOG00015012753	ercc3	90	78.852	ENSPMAG00000005081	ercc3	99	78.571	Petromyzon_marinus
ENSSFOG00015012753	ercc3	99	87.708	ENSPCIG00000011821	ERCC3	96	89.272	Phascolarctos_cinereus
ENSSFOG00015012753	ercc3	96	90.861	ENSPFOG00000015604	ercc3	97	90.861	Poecilia_formosa
ENSSFOG00015012753	ercc3	96	88.111	ENSPLAG00000022245	ercc3	100	91.123	Poecilia_latipinna
ENSSFOG00015012753	ercc3	96	90.861	ENSPMEG00000016987	ercc3	97	90.861	Poecilia_mexicana
ENSSFOG00015012753	ercc3	100	89.286	ENSPREG00000020921	ercc3	96	90.861	Poecilia_reticulata
ENSSFOG00015012753	ercc3	100	87.023	ENSPPYG00000012769	ERCC3	96	88.228	Pongo_abelii
ENSSFOG00015012753	ercc3	100	87.516	ENSPCOG00000024903	ERCC3	96	88.742	Propithecus_coquereli
ENSSFOG00015012753	ercc3	90	86.822	ENSPVAG00000013774	ERCC3	86	86.822	Pteropus_vampyrus
ENSSFOG00015012753	ercc3	100	90.306	ENSPNYG00000001208	ercc3	97	91.667	Pundamilia_nyererei
ENSSFOG00015012753	ercc3	100	90.677	ENSPNAG00000005748	ercc3	98	91.634	Pygocentrus_nattereri
ENSSFOG00015012753	ercc3	100	87.134	ENSRNOG00000013180	Ercc3	96	88.344	Rattus_norvegicus
ENSSFOG00015012753	ercc3	100	87.898	ENSRBIG00000027692	ERCC3	96	89.139	Rhinopithecus_bieti
ENSSFOG00015012753	ercc3	100	87.898	ENSRROG00000040673	ERCC3	96	89.139	Rhinopithecus_roxellana
ENSSFOG00015012753	ercc3	91	55.978	YIL143C	SSL2	85	56.114	Saccharomyces_cerevisiae
ENSSFOG00015012753	ercc3	100	87.516	ENSSBOG00000023079	ERCC3	96	88.742	Saimiri_boliviensis_boliviensis
ENSSFOG00015012753	ercc3	96	88.742	ENSSHAG00000007423	ERCC3	96	88.742	Sarcophilus_harrisii
ENSSFOG00015012753	ercc3	100	89.327	ENSSMAG00000011915	ercc3	97	90.078	Scophthalmus_maximus
ENSSFOG00015012753	ercc3	100	90.816	ENSSDUG00000021181	ercc3	97	91.931	Seriola_dumerili
ENSSFOG00015012753	ercc3	100	90.816	ENSSLDG00000008744	ercc3	94	92.063	Seriola_lalandi_dorsalis
ENSSFOG00015012753	ercc3	55	80.184	ENSSARG00000000751	-	85	80.184	Sorex_araneus
ENSSFOG00015012753	ercc3	90	87.412	ENSSPUG00000015183	ERCC3	91	87.412	Sphenodon_punctatus
ENSSFOG00015012753	ercc3	100	90.306	ENSSPAG00000004748	ercc3	97	91.667	Stegastes_partitus
ENSSFOG00015012753	ercc3	100	87.643	ENSSSCG00000015721	ERCC3	96	88.742	Sus_scrofa
ENSSFOG00015012753	ercc3	99	87.242	ENSTGUG00000004920	-	99	87.974	Taeniopygia_guttata
ENSSFOG00015012753	ercc3	100	88.633	ENSTRUG00000017185	ercc3	97	90.464	Takifugu_rubripes
ENSSFOG00015012753	ercc3	97	88.073	ENSTNIG00000005457	ercc3	99	88.477	Tetraodon_nigroviridis
ENSSFOG00015012753	ercc3	80	88.217	ENSTBEG00000009381	ERCC3	81	88.217	Tupaia_belangeri
ENSSFOG00015012753	ercc3	68	92.075	ENSUAMG00000009589	-	100	92.075	Ursus_americanus
ENSSFOG00015012753	ercc3	100	87.134	ENSUMAG00000008361	ERCC3	96	88.609	Ursus_maritimus
ENSSFOG00015012753	ercc3	92	88.766	ENSVVUG00000010431	ERCC3	100	88.766	Vulpes_vulpes
ENSSFOG00015012753	ercc3	100	86.548	ENSXETG00000033646	ercc3	96	87.715	Xenopus_tropicalis
ENSSFOG00015012753	ercc3	99	89.133	ENSXCOG00000001791	ercc3	97	90.451	Xiphophorus_couchianus
ENSSFOG00015012753	ercc3	100	89.413	ENSXMAG00000003641	ercc3	95	92.751	Xiphophorus_maculatus