EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015012795 (Gene tree)
Gene ID: 108934875
Gene Symbol: ddx56
Alias: noh61|zgc:110078
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 9840 bases
Position: chrKV410795.1:495875-505714
Accession: 108934875
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015019919	ResIII	PF04851.15	9e-07	1	1
ENSSFOP00015019935	ResIII	PF04851.15	1e-06	1	1
ENSSFOP00015019919	DEAD	PF00270.29	2.9e-38	1	1
ENSSFOP00015019935	DEAD	PF00270.29	2.9e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015020163	-	1677	XM_018753047	ENSSFOP00015019935	558 (aa)	XP_018608563	A0A1W5A5I8
ENSSFOT00015020148	-	1716	-	ENSSFOP00015019919	571 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015012795's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015012795's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015012795	ddx56	72	30.332	ENSSFOG00015004961	DDX5	68	30.128
ENSSFOG00015012795	ddx56	71	31.592	ENSSFOG00015005055	ddx52	65	31.841
ENSSFOG00015012795	ddx56	74	32.075	ENSSFOG00015013392	ddx47	82	32.075
ENSSFOG00015012795	ddx56	72	30.095	ENSSFOG00015003802	ddx5	62	30.303
ENSSFOG00015012795	ddx56	69	30.179	ENSSFOG00015022557	ddx18	51	30.179

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015012795	ddx56	98	65.209	ENSG00000136271	DDX56	99	65.957	Homo_sapiens
ENSSFOG00015012795	ddx56	100	78.863	ENSAPOG00000017113	ddx56	100	78.863	Acanthochromis_polyacanthus
ENSSFOG00015012795	ddx56	98	65.217	ENSAMEG00000017711	DDX56	98	65.761	Ailuropoda_melanoleuca
ENSSFOG00015012795	ddx56	94	67.041	ENSACIG00000013747	ddx56	99	79.670	Amphilophus_citrinellus
ENSSFOG00015012795	ddx56	89	81.800	ENSAOCG00000018059	ddx56	99	78.368	Amphiprion_ocellaris
ENSSFOG00015012795	ddx56	86	81.930	ENSAOCG00000015447	-	94	78.095	Amphiprion_ocellaris
ENSSFOG00015012795	ddx56	100	78.036	ENSAPEG00000007267	ddx56	100	78.036	Amphiprion_percula
ENSSFOG00015012795	ddx56	99	78.276	ENSATEG00000005279	ddx56	99	78.276	Anabas_testudineus
ENSSFOG00015012795	ddx56	100	76.868	ENSACLG00000020113	ddx56	100	76.868	Astatotilapia_calliptera
ENSSFOG00015012795	ddx56	99	73.345	ENSAMXG00000019357	ddx56	99	73.882	Astyanax_mexicanus
ENSSFOG00015012795	ddx56	98	65.091	ENSBTAG00000010602	DDX56	98	65.636	Bos_taurus
ENSSFOG00015012795	ddx56	96	39.820	WBGene00016073	C24H12.4	86	39.820	Caenorhabditis_elegans
ENSSFOG00015012795	ddx56	98	65.392	ENSCJAG00000012233	DDX56	98	65.392	Callithrix_jacchus
ENSSFOG00015012795	ddx56	82	63.239	ENSCAFG00000029295	DDX56	99	65.066	Canis_familiaris
ENSSFOG00015012795	ddx56	98	63.206	ENSCAFG00020019695	DDX56	97	64.000	Canis_lupus_dingo
ENSSFOG00015012795	ddx56	99	64.758	ENSCHIG00000014261	DDX56	99	65.295	Capra_hircus
ENSSFOG00015012795	ddx56	97	64.835	ENSTSYG00000008048	DDX56	97	65.568	Carlito_syrichta
ENSSFOG00015012795	ddx56	85	64.990	ENSCAPG00000006286	DDX56	98	64.990	Cavia_aperea
ENSSFOG00015012795	ddx56	98	65.455	ENSCPOG00000003359	DDX56	98	65.455	Cavia_porcellus
ENSSFOG00015012795	ddx56	98	64.299	ENSCCAG00000025303	DDX56	98	64.663	Cebus_capucinus
ENSSFOG00015012795	ddx56	98	65.209	ENSCATG00000039389	DDX56	98	65.209	Cercocebus_atys
ENSSFOG00015012795	ddx56	98	65.091	ENSCLAG00000007666	DDX56	98	65.091	Chinchilla_lanigera
ENSSFOG00015012795	ddx56	97	65.568	ENSCSAG00000015636	DDX56	97	65.568	Chlorocebus_sabaeus
ENSSFOG00015012795	ddx56	99	69.659	ENSCPBG00000024556	DDX56	98	69.534	Chrysemys_picta_bellii
ENSSFOG00015012795	ddx56	89	61.858	ENSCING00000005185	-	98	62.648	Ciona_intestinalis
ENSSFOG00015012795	ddx56	88	58.918	ENSCSAVG00000011266	-	99	59.319	Ciona_savignyi
ENSSFOG00015012795	ddx56	98	65.209	ENSCANG00000028187	DDX56	98	65.209	Colobus_angolensis_palliatus
ENSSFOG00015012795	ddx56	97	66.788	ENSCGRG00001019019	Ddx56	98	66.788	Cricetulus_griseus_chok1gshd
ENSSFOG00015012795	ddx56	97	66.788	ENSCGRG00000011870	Ddx56	98	66.788	Cricetulus_griseus_crigri
ENSSFOG00015012795	ddx56	100	75.752	ENSCSEG00000008368	ddx56	100	76.106	Cynoglossus_semilaevis
ENSSFOG00015012795	ddx56	98	75.862	ENSCVAG00000006499	ddx56	99	76.225	Cyprinodon_variegatus
ENSSFOG00015012795	ddx56	99	77.321	ENSDARG00000020913	ddx56	99	77.500	Danio_rerio
ENSSFOG00015012795	ddx56	85	64.151	ENSDNOG00000036526	DDX56	97	64.151	Dasypus_novemcinctus
ENSSFOG00015012795	ddx56	99	49.374	FBgn0001565	Hlc	99	49.374	Drosophila_melanogaster
ENSSFOG00015012795	ddx56	63	66.667	ENSETEG00000002969	-	64	66.667	Echinops_telfairi
ENSSFOG00015012795	ddx56	85	46.429	ENSETEG00000019559	-	99	46.429	Echinops_telfairi
ENSSFOG00015012795	ddx56	97	63.849	ENSEBUG00000009986	ddx56	99	64.557	Eptatretus_burgeri
ENSSFOG00015012795	ddx56	90	67.262	ENSEASG00005017795	DDX56	97	65.498	Equus_asinus_asinus
ENSSFOG00015012795	ddx56	90	67.063	ENSECAG00000019897	DDX56	97	65.314	Equus_caballus
ENSSFOG00015012795	ddx56	85	65.756	ENSEEUG00000004849	DDX56	98	65.756	Erinaceus_europaeus
ENSSFOG00015012795	ddx56	100	79.286	ENSELUG00000004150	ddx56	100	78.660	Esox_lucius
ENSSFOG00015012795	ddx56	98	64.130	ENSFCAG00000010261	DDX56	98	64.493	Felis_catus
ENSSFOG00015012795	ddx56	98	64.727	ENSFDAG00000007128	DDX56	98	64.909	Fukomys_damarensis
ENSSFOG00015012795	ddx56	98	75.136	ENSFHEG00000018008	ddx56	96	80.080	Fundulus_heteroclitus
ENSSFOG00015012795	ddx56	100	69.751	ENSGAFG00000006906	ddx56	93	76.768	Gambusia_affinis
ENSSFOG00015012795	ddx56	92	72.868	ENSGAGG00000006789	DDX56	92	72.868	Gopherus_agassizii
ENSSFOG00015012795	ddx56	98	65.209	ENSGGOG00000012031	DDX56	98	65.209	Gorilla_gorilla
ENSSFOG00015012795	ddx56	95	73.171	ENSHBUG00000015246	ddx56	96	73.171	Haplochromis_burtoni
ENSSFOG00015012795	ddx56	98	64.000	ENSHGLG00000017271	DDX56	98	64.000	Heterocephalus_glaber_female
ENSSFOG00015012795	ddx56	98	64.000	ENSHGLG00100015731	DDX56	98	64.000	Heterocephalus_glaber_male
ENSSFOG00015012795	ddx56	100	75.936	ENSHCOG00000001685	ddx56	100	75.936	Hippocampus_comes
ENSSFOG00015012795	ddx56	99	76.071	ENSIPUG00000006602	ddx56	98	76.429	Ictalurus_punctatus
ENSSFOG00015012795	ddx56	98	64.727	ENSSTOG00000000464	DDX56	98	64.727	Ictidomys_tridecemlineatus
ENSSFOG00015012795	ddx56	97	66.606	ENSJJAG00000014269	Ddx56	99	66.364	Jaculus_jaculus
ENSSFOG00015012795	ddx56	98	75.719	ENSKMAG00000016611	ddx56	99	76.893	Kryptolebias_marmoratus
ENSSFOG00015012795	ddx56	98	77.158	ENSLBEG00000026281	ddx56	99	77.338	Labrus_bergylta
ENSSFOG00015012795	ddx56	98	73.126	ENSLACG00000015551	DDX56	96	73.175	Latimeria_chalumnae
ENSSFOG00015012795	ddx56	100	77.345	ENSLOCG00000015185	ddx56	100	77.385	Lepisosteus_oculatus
ENSSFOG00015012795	ddx56	98	65.280	ENSLAFG00000018206	DDX56	99	65.280	Loxodonta_africana
ENSSFOG00015012795	ddx56	98	64.663	ENSMFAG00000041001	DDX56	98	64.663	Macaca_fascicularis
ENSSFOG00015012795	ddx56	98	64.663	ENSMMUG00000002645	DDX56	98	64.663	Macaca_mulatta
ENSSFOG00015012795	ddx56	98	64.663	ENSMNEG00000028492	DDX56	98	64.663	Macaca_nemestrina
ENSSFOG00015012795	ddx56	98	65.574	ENSMLEG00000043591	DDX56	98	65.574	Mandrillus_leucophaeus
ENSSFOG00015012795	ddx56	100	77.046	ENSMAMG00000007776	ddx56	100	77.758	Mastacembelus_armatus
ENSSFOG00015012795	ddx56	100	76.868	ENSMZEG00005009813	ddx56	100	76.868	Maylandia_zebra
ENSSFOG00015012795	ddx56	97	65.876	ENSMICG00000005550	DDX56	98	65.876	Microcebus_murinus
ENSSFOG00015012795	ddx56	97	65.693	ENSMOCG00000016782	Ddx56	98	65.693	Microtus_ochrogaster
ENSSFOG00015012795	ddx56	93	77.213	ENSMMOG00000009654	ddx56	100	77.589	Mola_mola
ENSSFOG00015012795	ddx56	97	60.291	ENSMODG00000016137	DDX56	97	60.291	Monodelphis_domestica
ENSSFOG00015012795	ddx56	67	73.298	ENSMALG00000016910	ddx56	99	73.298	Monopterus_albus
ENSSFOG00015012795	ddx56	97	64.964	MGP_CAROLIEiJ_G0016069	Ddx56	98	64.964	Mus_caroli
ENSSFOG00015012795	ddx56	97	65.693	ENSMUSG00000004393	Ddx56	98	65.693	Mus_musculus
ENSSFOG00015012795	ddx56	97	65.328	MGP_PahariEiJ_G0016822	Ddx56	98	65.328	Mus_pahari
ENSSFOG00015012795	ddx56	97	65.693	MGP_SPRETEiJ_G0016911	Ddx56	98	65.693	Mus_spretus
ENSSFOG00015012795	ddx56	96	65.867	ENSMPUG00000018196	DDX56	85	65.867	Mustela_putorius_furo
ENSSFOG00015012795	ddx56	99	63.669	ENSMLUG00000003509	DDX56	99	65.288	Myotis_lucifugus
ENSSFOG00015012795	ddx56	97	66.423	ENSNGAG00000018785	Ddx56	98	66.182	Nannospalax_galili
ENSSFOG00015012795	ddx56	95	74.858	ENSNBRG00000002656	ddx56	96	74.858	Neolamprologus_brichardi
ENSSFOG00015012795	ddx56	98	65.392	ENSNLEG00000003816	DDX56	98	65.392	Nomascus_leucogenys
ENSSFOG00015012795	ddx56	88	62.753	ENSMEUG00000006788	DDX56	99	62.551	Notamacropus_eugenii
ENSSFOG00015012795	ddx56	98	64.182	ENSOPRG00000000292	-	98	64.182	Ochotona_princeps
ENSSFOG00015012795	ddx56	66	66.933	ENSODEG00000014807	DDX56	99	66.933	Octodon_degus
ENSSFOG00015012795	ddx56	100	76.565	ENSONIG00000011509	ddx56	99	76.565	Oreochromis_niloticus
ENSSFOG00015012795	ddx56	71	57.711	ENSOANG00000015987	-	95	57.108	Ornithorhynchus_anatinus
ENSSFOG00015012795	ddx56	95	56.716	ENSOANG00000006320	-	99	57.196	Ornithorhynchus_anatinus
ENSSFOG00015012795	ddx56	98	64.545	ENSOCUG00000022918	DDX56	98	64.727	Oryctolagus_cuniculus
ENSSFOG00015012795	ddx56	100	75.714	ENSORLG00000001434	ddx56	100	75.714	Oryzias_latipes
ENSSFOG00015012795	ddx56	100	75.536	ENSORLG00020015718	ddx56	97	75.536	Oryzias_latipes_hni
ENSSFOG00015012795	ddx56	99	75.671	ENSORLG00015003004	ddx56	96	75.671	Oryzias_latipes_hsok
ENSSFOG00015012795	ddx56	100	76.071	ENSOMEG00000022072	ddx56	99	76.071	Oryzias_melastigma
ENSSFOG00015012795	ddx56	97	64.954	ENSOGAG00000009981	DDX56	97	65.934	Otolemur_garnettii
ENSSFOG00015012795	ddx56	98	65.273	ENSOARG00000015240	DDX56	97	67.108	Ovis_aries
ENSSFOG00015012795	ddx56	95	55.140	ENSPPAG00000031263	-	97	54.762	Pan_paniscus
ENSSFOG00015012795	ddx56	98	62.724	ENSPPAG00000029147	DDX56	98	62.724	Pan_paniscus
ENSSFOG00015012795	ddx56	98	63.768	ENSPPRG00000014594	DDX56	98	64.855	Panthera_pardus
ENSSFOG00015012795	ddx56	88	61.585	ENSPTIG00000019500	DDX56	93	61.992	Panthera_tigris_altaica
ENSSFOG00015012795	ddx56	94	54.221	ENSPTRG00000052765	-	99	55.535	Pan_troglodytes
ENSSFOG00015012795	ddx56	98	65.209	ENSPTRG00000019147	DDX56	98	65.209	Pan_troglodytes
ENSSFOG00015012795	ddx56	98	65.209	ENSPANG00000002446	DDX56	98	65.209	Papio_anubis
ENSSFOG00015012795	ddx56	100	82.826	ENSPKIG00000018998	ddx56	99	82.826	Paramormyrops_kingsleyae
ENSSFOG00015012795	ddx56	95	77.341	ENSPMGG00000017421	ddx56	99	77.341	Periophthalmus_magnuspinnatus
ENSSFOG00015012795	ddx56	98	66.667	ENSPCIG00000009336	DDX56	98	66.667	Phascolarctos_cinereus
ENSSFOG00015012795	ddx56	100	76.429	ENSPFOG00000018658	ddx56	100	76.827	Poecilia_formosa
ENSSFOG00015012795	ddx56	100	76.607	ENSPLAG00000019208	ddx56	100	77.005	Poecilia_latipinna
ENSSFOG00015012795	ddx56	100	76.250	ENSPMEG00000001775	ddx56	100	76.649	Poecilia_mexicana
ENSSFOG00015012795	ddx56	100	76.964	ENSPREG00000015142	ddx56	100	76.964	Poecilia_reticulata
ENSSFOG00015012795	ddx56	98	65.392	ENSPPYG00000017591	DDX56	98	65.392	Pongo_abelii
ENSSFOG00015012795	ddx56	97	65.138	ENSPCAG00000011499	DDX56	99	65.138	Procavia_capensis
ENSSFOG00015012795	ddx56	97	65.568	ENSPCOG00000024864	DDX56	97	65.568	Propithecus_coquereli
ENSSFOG00015012795	ddx56	86	69.378	ENSPVAG00000000791	DDX56	86	69.378	Pteropus_vampyrus
ENSSFOG00015012795	ddx56	100	76.690	ENSPNYG00000019212	ddx56	100	76.690	Pundamilia_nyererei
ENSSFOG00015012795	ddx56	98	76.978	ENSPNAG00000025446	ddx56	99	77.338	Pygocentrus_nattereri
ENSSFOG00015012795	ddx56	97	65.146	ENSRNOG00000004670	Ddx56	98	65.146	Rattus_norvegicus
ENSSFOG00015012795	ddx56	98	65.392	ENSRBIG00000030140	DDX56	98	65.392	Rhinopithecus_bieti
ENSSFOG00015012795	ddx56	98	65.209	ENSRROG00000044428	DDX56	98	65.209	Rhinopithecus_roxellana
ENSSFOG00015012795	ddx56	97	42.470	YLR276C	-	98	42.833	Saccharomyces_cerevisiae
ENSSFOG00015012795	ddx56	97	65.625	ENSSBOG00000034339	DDX56	97	65.625	Saimiri_boliviensis_boliviensis
ENSSFOG00015012795	ddx56	85	66.457	ENSSHAG00000016615	DDX56	98	66.457	Sarcophilus_harrisii
ENSSFOG00015012795	ddx56	98	77.518	ENSSMAG00000011280	ddx56	99	78.731	Scophthalmus_maximus
ENSSFOG00015012795	ddx56	100	77.660	ENSSDUG00000023597	ddx56	100	78.014	Seriola_dumerili
ENSSFOG00015012795	ddx56	100	77.660	ENSSLDG00000018369	ddx56	100	78.014	Seriola_lalandi_dorsalis
ENSSFOG00015012795	ddx56	68	74.138	ENSSARG00000014363	DDX56	78	71.014	Sorex_araneus
ENSSFOG00015012795	ddx56	98	71.091	ENSSPUG00000000784	DDX56	95	71.091	Sphenodon_punctatus
ENSSFOG00015012795	ddx56	91	82.422	ENSSPAG00000009392	ddx56	99	80.337	Stegastes_partitus
ENSSFOG00015012795	ddx56	97	65.138	ENSSSCG00000016745	DDX56	98	65.751	Sus_scrofa
ENSSFOG00015012795	ddx56	100	74.824	ENSTRUG00000018623	ddx56	100	75.000	Takifugu_rubripes
ENSSFOG00015012795	ddx56	100	74.386	ENSTNIG00000013593	ddx56	100	74.912	Tetraodon_nigroviridis
ENSSFOG00015012795	ddx56	98	64.428	ENSTBEG00000007119	DDX56	98	64.428	Tupaia_belangeri
ENSSFOG00015012795	ddx56	84	64.059	ENSTTRG00000010552	DDX56	97	65.751	Tursiops_truncatus
ENSSFOG00015012795	ddx56	96	65.683	ENSUAMG00000014194	DDX56	97	66.421	Ursus_americanus
ENSSFOG00015012795	ddx56	96	65.683	ENSUMAG00000009666	DDX56	97	66.421	Ursus_maritimus
ENSSFOG00015012795	ddx56	98	64.117	ENSVVUG00000011905	DDX56	97	65.455	Vulpes_vulpes
ENSSFOG00015012795	ddx56	99	70.662	ENSXETG00000019000	ddx56	99	71.199	Xenopus_tropicalis
ENSSFOG00015012795	ddx56	100	73.477	ENSXCOG00000017413	ddx56	99	73.477	Xiphophorus_couchianus
ENSSFOG00015012795	ddx56	100	76.607	ENSXMAG00000018749	ddx56	100	76.607	Xiphophorus_maculatus