EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015012810 (Gene tree)
Gene ID: 108939941
Gene Symbol: polr2f
Alias: zgc:92790
Full Name: RNA polymerase II subunit F
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 3444 bases
Position: chrKV411197.1:11013802-11017245
Accession: 108939941
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015019929	RNA_pol_Rpb6	PF01192.22	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015020159	-	1578	XM_018761634	ENSSFOP00015019929	127 (aa)	XP_018617150	A0A1W5AVH6

Gene Model

Click here to download ENSSFOG00015012810's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03020	RNA polymerase	KEGG
sfm04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015012810's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015012810	polr2f	100	90.551	ENSG00000100142	POLR2F	100	90.551	Homo_sapiens
ENSSFOG00015012810	polr2f	100	96.850	ENSAPOG00000002902	polr2f	100	96.850	Acanthochromis_polyacanthus
ENSSFOG00015012810	polr2f	100	89.764	ENSAMEG00000010331	POLR2F	100	89.764	Ailuropoda_melanoleuca
ENSSFOG00015012810	polr2f	100	98.425	ENSACIG00000000923	polr2f	100	98.425	Amphilophus_citrinellus
ENSSFOG00015012810	polr2f	100	97.638	ENSAOCG00000003182	polr2f	100	97.638	Amphiprion_ocellaris
ENSSFOG00015012810	polr2f	100	97.638	ENSAPEG00000012999	polr2f	100	97.638	Amphiprion_percula
ENSSFOG00015012810	polr2f	100	98.425	ENSATEG00000008929	polr2f	100	98.425	Anabas_testudineus
ENSSFOG00015012810	polr2f	80	90.099	ENSAPLG00000015235	POLR2F	85	89.623	Anas_platyrhynchos
ENSSFOG00015012810	polr2f	100	91.339	ENSACAG00000015288	POLR2F	100	91.339	Anolis_carolinensis
ENSSFOG00015012810	polr2f	100	90.551	ENSANAG00000020840	POLR2F	100	90.551	Aotus_nancymaae
ENSSFOG00015012810	polr2f	100	99.213	ENSACLG00000016129	polr2f	100	99.213	Astatotilapia_calliptera
ENSSFOG00015012810	polr2f	100	97.638	ENSAMXG00000012812	polr2f	100	97.638	Astyanax_mexicanus
ENSSFOG00015012810	polr2f	100	90.551	ENSBTAG00000004820	POLR2F	100	90.551	Bos_taurus
ENSSFOG00015012810	polr2f	63	77.500	WBGene00007355	rpb-6	73	68.317	Caenorhabditis_elegans
ENSSFOG00015012810	polr2f	100	90.551	ENSCJAG00000048241	POLR2F	100	90.551	Callithrix_jacchus
ENSSFOG00015012810	polr2f	100	89.764	ENSCAFG00000001437	POLR2F	100	89.764	Canis_familiaris
ENSSFOG00015012810	polr2f	83	90.566	ENSCHIG00000012907	POLR2F	83	90.566	Capra_hircus
ENSSFOG00015012810	polr2f	100	89.764	ENSTSYG00000008187	POLR2F	100	89.764	Carlito_syrichta
ENSSFOG00015012810	polr2f	83	90.566	ENSCAPG00000013419	POLR2F	83	90.566	Cavia_aperea
ENSSFOG00015012810	polr2f	100	90.551	ENSCPOG00000034094	POLR2F	100	90.551	Cavia_porcellus
ENSSFOG00015012810	polr2f	100	90.551	ENSCCAG00000036489	POLR2F	100	90.551	Cebus_capucinus
ENSSFOG00015012810	polr2f	100	90.551	ENSCATG00000041014	POLR2F	100	90.551	Cercocebus_atys
ENSSFOG00015012810	polr2f	100	90.551	ENSCLAG00000017167	POLR2F	100	90.551	Chinchilla_lanigera
ENSSFOG00015012810	polr2f	100	90.551	ENSCSAG00000006862	POLR2F	100	90.551	Chlorocebus_sabaeus
ENSSFOG00015012810	polr2f	83	91.509	ENSCPBG00000023030	POLR2F	54	91.509	Chrysemys_picta_bellii
ENSSFOG00015012810	polr2f	78	76.000	ENSCING00000019359	-	71	76.000	Ciona_intestinalis
ENSSFOG00015012810	polr2f	100	90.551	ENSCANG00000041884	POLR2F	100	90.551	Colobus_angolensis_palliatus
ENSSFOG00015012810	polr2f	100	90.551	ENSCGRG00001023541	POLR2F	100	90.551	Cricetulus_griseus_chok1gshd
ENSSFOG00015012810	polr2f	100	90.551	ENSCGRG00000011921	POLR2F	100	90.551	Cricetulus_griseus_crigri
ENSSFOG00015012810	polr2f	95	96.694	ENSCSEG00000006848	polr2f	95	96.694	Cynoglossus_semilaevis
ENSSFOG00015012810	polr2f	100	96.063	ENSCVAG00000010437	polr2f	100	96.063	Cyprinodon_variegatus
ENSSFOG00015012810	polr2f	100	95.276	ENSDARG00000036625	polr2f	100	95.276	Danio_rerio
ENSSFOG00015012810	polr2f	100	90.551	ENSDNOG00000005884	POLR2F	100	90.551	Dasypus_novemcinctus
ENSSFOG00015012810	polr2f	100	90.551	ENSDORG00000024789	Polr2f	100	90.551	Dipodomys_ordii
ENSSFOG00015012810	polr2f	63	85.000	FBgn0003275	RpII18	74	75.258	Drosophila_melanogaster
ENSSFOG00015012810	polr2f	54	83.824	ENSEBUG00000008509	polr2f	70	83.824	Eptatretus_burgeri
ENSSFOG00015012810	polr2f	77	68.367	ENSEBUG00000002842	-	90	65.385	Eptatretus_burgeri
ENSSFOG00015012810	polr2f	60	88.158	ENSEASG00005018802	-	68	88.158	Equus_asinus_asinus
ENSSFOG00015012810	polr2f	100	88.189	ENSEEUG00000011014	POLR2F	100	88.189	Erinaceus_europaeus
ENSSFOG00015012810	polr2f	100	95.276	ENSELUG00000000319	polr2f	100	95.276	Esox_lucius
ENSSFOG00015012810	polr2f	100	89.764	ENSFCAG00000002806	POLR2F	100	89.764	Felis_catus
ENSSFOG00015012810	polr2f	100	90.551	ENSFDAG00000009926	POLR2F	100	90.551	Fukomys_damarensis
ENSSFOG00015012810	polr2f	88	95.536	ENSFHEG00000005448	polr2f	84	96.226	Fundulus_heteroclitus
ENSSFOG00015012810	polr2f	100	88.189	ENSGMOG00000009967	polr2f	100	88.189	Gadus_morhua
ENSSFOG00015012810	polr2f	100	89.764	ENSGALG00000012291	POLR2F	100	89.764	Gallus_gallus
ENSSFOG00015012810	polr2f	100	95.276	ENSGAFG00000017573	polr2f	100	95.276	Gambusia_affinis
ENSSFOG00015012810	polr2f	100	92.913	ENSGACG00000007322	polr2f	100	92.913	Gasterosteus_aculeatus
ENSSFOG00015012810	polr2f	100	91.339	ENSGAGG00000021757	POLR2F	100	91.339	Gopherus_agassizii
ENSSFOG00015012810	polr2f	100	90.551	ENSGGOG00000005213	POLR2F	100	90.551	Gorilla_gorilla
ENSSFOG00015012810	polr2f	100	99.213	ENSHBUG00000022089	polr2f	100	99.213	Haplochromis_burtoni
ENSSFOG00015012810	polr2f	100	90.551	ENSHGLG00000018942	POLR2F	100	90.551	Heterocephalus_glaber_female
ENSSFOG00015012810	polr2f	100	90.551	ENSHGLG00100012851	POLR2F	100	90.551	Heterocephalus_glaber_male
ENSSFOG00015012810	polr2f	100	95.276	ENSHCOG00000006149	polr2f	100	95.276	Hippocampus_comes
ENSSFOG00015012810	polr2f	76	97.938	ENSIPUG00000000814	polr2f	100	97.938	Ictalurus_punctatus
ENSSFOG00015012810	polr2f	100	90.551	ENSSTOG00000025722	POLR2F	100	90.551	Ictidomys_tridecemlineatus
ENSSFOG00015012810	polr2f	100	90.551	ENSJJAG00000008097	Polr2f	100	90.551	Jaculus_jaculus
ENSSFOG00015012810	polr2f	100	98.425	ENSKMAG00000014230	polr2f	100	98.425	Kryptolebias_marmoratus
ENSSFOG00015012810	polr2f	94	95.833	ENSLBEG00000008383	polr2f	100	95.833	Labrus_bergylta
ENSSFOG00015012810	polr2f	100	92.913	ENSLACG00000003931	POLR2F	100	92.913	Latimeria_chalumnae
ENSSFOG00015012810	polr2f	100	96.154	ENSLOCG00000011827	polr2f	100	96.154	Lepisosteus_oculatus
ENSSFOG00015012810	polr2f	100	90.551	ENSLAFG00000012632	POLR2F	100	90.551	Loxodonta_africana
ENSSFOG00015012810	polr2f	100	90.551	ENSMFAG00000033687	POLR2F	100	90.551	Macaca_fascicularis
ENSSFOG00015012810	polr2f	83	90.566	ENSMMUG00000038231	POLR2F	87	90.566	Macaca_mulatta
ENSSFOG00015012810	polr2f	100	90.551	ENSMNEG00000044365	POLR2F	100	90.551	Macaca_nemestrina
ENSSFOG00015012810	polr2f	100	90.551	ENSMLEG00000033077	POLR2F	100	90.551	Mandrillus_leucophaeus
ENSSFOG00015012810	polr2f	100	97.638	ENSMAMG00000008056	polr2f	100	97.638	Mastacembelus_armatus
ENSSFOG00015012810	polr2f	100	99.213	ENSMZEG00005005705	polr2f	100	99.213	Maylandia_zebra
ENSSFOG00015012810	polr2f	100	89.764	ENSMGAG00000012504	POLR2F	100	89.764	Meleagris_gallopavo
ENSSFOG00015012810	polr2f	100	90.551	ENSMAUG00000018586	Polr2f	100	90.551	Mesocricetus_auratus
ENSSFOG00015012810	polr2f	100	90.551	ENSMICG00000013128	POLR2F	100	90.551	Microcebus_murinus
ENSSFOG00015012810	polr2f	100	90.551	ENSMOCG00000000237	Polr2f	100	90.551	Microtus_ochrogaster
ENSSFOG00015012810	polr2f	100	97.638	ENSMMOG00000005106	polr2f	100	97.638	Mola_mola
ENSSFOG00015012810	polr2f	100	89.764	ENSMODG00000019063	POLR2F	100	89.764	Monodelphis_domestica
ENSSFOG00015012810	polr2f	100	96.850	ENSMALG00000001444	polr2f	100	96.850	Monopterus_albus
ENSSFOG00015012810	polr2f	100	89.764	MGP_CAROLIEiJ_G0020006	Polr2f	100	89.764	Mus_caroli
ENSSFOG00015012810	polr2f	100	89.764	ENSMUSG00000033020	Polr2f	100	89.796	Mus_musculus
ENSSFOG00015012810	polr2f	100	89.764	MGP_PahariEiJ_G0020008	Polr2f	100	89.764	Mus_pahari
ENSSFOG00015012810	polr2f	100	89.764	MGP_SPRETEiJ_G0020904	Polr2f	100	89.764	Mus_spretus
ENSSFOG00015012810	polr2f	100	89.764	ENSMPUG00000012997	POLR2F	100	89.764	Mustela_putorius_furo
ENSSFOG00015012810	polr2f	100	88.372	ENSMLUG00000014315	-	100	88.372	Myotis_lucifugus
ENSSFOG00015012810	polr2f	98	83.871	ENSMLUG00000029612	-	98	83.871	Myotis_lucifugus
ENSSFOG00015012810	polr2f	100	90.551	ENSNGAG00000020682	Polr2f	100	90.551	Nannospalax_galili
ENSSFOG00015012810	polr2f	100	98.425	ENSNBRG00000002492	polr2f	100	98.425	Neolamprologus_brichardi
ENSSFOG00015012810	polr2f	100	90.551	ENSNLEG00000014987	-	100	90.551	Nomascus_leucogenys
ENSSFOG00015012810	polr2f	100	90.551	ENSODEG00000014123	POLR2F	100	90.551	Octodon_degus
ENSSFOG00015012810	polr2f	100	98.425	ENSONIG00000008394	polr2f	100	98.425	Oreochromis_niloticus
ENSSFOG00015012810	polr2f	100	91.339	ENSOANG00000014684	POLR2F	100	91.339	Ornithorhynchus_anatinus
ENSSFOG00015012810	polr2f	100	90.551	ENSOCUG00000012064	POLR2F	100	90.551	Oryctolagus_cuniculus
ENSSFOG00015012810	polr2f	100	95.276	ENSORLG00000014580	polr2f	100	95.276	Oryzias_latipes
ENSSFOG00015012810	polr2f	100	96.063	ENSORLG00020006910	polr2f	100	96.063	Oryzias_latipes_hni
ENSSFOG00015012810	polr2f	90	93.860	ENSORLG00015015332	polr2f	77	93.860	Oryzias_latipes_hsok
ENSSFOG00015012810	polr2f	80	93.137	ENSOMEG00000006530	polr2f	65	87.273	Oryzias_melastigma
ENSSFOG00015012810	polr2f	100	90.551	ENSOGAG00000025463	POLR2F	100	90.551	Otolemur_garnettii
ENSSFOG00015012810	polr2f	100	90.551	ENSOARG00000014692	POLR2F	100	90.551	Ovis_aries
ENSSFOG00015012810	polr2f	100	90.551	ENSPPAG00000024276	POLR2F	100	90.551	Pan_paniscus
ENSSFOG00015012810	polr2f	100	89.764	ENSPPRG00000013030	POLR2F	100	89.764	Panthera_pardus
ENSSFOG00015012810	polr2f	82	90.385	ENSPTIG00000000632	POLR2F	85	90.385	Panthera_tigris_altaica
ENSSFOG00015012810	polr2f	100	90.551	ENSPTRG00000014356	POLR2F	100	90.551	Pan_troglodytes
ENSSFOG00015012810	polr2f	100	90.551	ENSPANG00000023979	POLR2F	100	90.551	Papio_anubis
ENSSFOG00015012810	polr2f	100	97.638	ENSPKIG00000002464	polr2f	100	97.638	Paramormyrops_kingsleyae
ENSSFOG00015012810	polr2f	56	95.775	ENSPSIG00000013913	POLR2F	100	95.775	Pelodiscus_sinensis
ENSSFOG00015012810	polr2f	100	97.638	ENSPMGG00000009619	polr2f	100	97.638	Periophthalmus_magnuspinnatus
ENSSFOG00015012810	polr2f	100	90.551	ENSPEMG00000008322	Polr2f	100	90.551	Peromyscus_maniculatus_bairdii
ENSSFOG00015012810	polr2f	100	89.764	ENSPCIG00000012000	-	100	89.764	Phascolarctos_cinereus
ENSSFOG00015012810	polr2f	100	96.063	ENSPFOG00000000139	polr2f	100	96.063	Poecilia_formosa
ENSSFOG00015012810	polr2f	100	96.063	ENSPLAG00000000988	polr2f	100	96.063	Poecilia_latipinna
ENSSFOG00015012810	polr2f	100	96.063	ENSPMEG00000019063	polr2f	100	96.063	Poecilia_mexicana
ENSSFOG00015012810	polr2f	77	95.918	ENSPREG00000016749	polr2f	100	95.918	Poecilia_reticulata
ENSSFOG00015012810	polr2f	100	90.551	ENSPPYG00000011809	POLR2F	100	90.551	Pongo_abelii
ENSSFOG00015012810	polr2f	100	90.551	ENSPCOG00000025716	POLR2F	100	90.551	Propithecus_coquereli
ENSSFOG00015012810	polr2f	79	88.000	ENSPVAG00000010107	POLR2F	64	88.000	Pteropus_vampyrus
ENSSFOG00015012810	polr2f	100	99.213	ENSPNYG00000019790	polr2f	100	99.213	Pundamilia_nyererei
ENSSFOG00015012810	polr2f	100	98.425	ENSPNAG00000009017	polr2f	100	98.425	Pygocentrus_nattereri
ENSSFOG00015012810	polr2f	100	89.764	ENSRNOG00000011214	Polr2f	100	89.764	Rattus_norvegicus
ENSSFOG00015012810	polr2f	100	90.551	ENSRBIG00000044878	POLR2F	100	90.551	Rhinopithecus_bieti
ENSSFOG00015012810	polr2f	100	90.551	ENSRROG00000019586	POLR2F	100	90.551	Rhinopithecus_roxellana
ENSSFOG00015012810	polr2f	98	50.327	YPR187W	RPO26	65	63.366	Saccharomyces_cerevisiae
ENSSFOG00015012810	polr2f	100	90.551	ENSSBOG00000023340	POLR2F	100	90.551	Saimiri_boliviensis_boliviensis
ENSSFOG00015012810	polr2f	100	89.764	ENSSHAG00000008502	POLR2F	100	89.764	Sarcophilus_harrisii
ENSSFOG00015012810	polr2f	100	96.850	ENSSMAG00000005354	polr2f	100	96.850	Scophthalmus_maximus
ENSSFOG00015012810	polr2f	100	97.638	ENSSDUG00000016273	polr2f	100	97.638	Seriola_dumerili
ENSSFOG00015012810	polr2f	100	97.638	ENSSLDG00000024895	polr2f	100	97.638	Seriola_lalandi_dorsalis
ENSSFOG00015012810	polr2f	100	91.339	ENSSPUG00000011343	POLR2F	100	91.339	Sphenodon_punctatus
ENSSFOG00015012810	polr2f	100	99.213	ENSSPAG00000019646	polr2f	100	99.213	Stegastes_partitus
ENSSFOG00015012810	polr2f	100	89.764	ENSSSCG00000000116	POLR2F	100	89.764	Sus_scrofa
ENSSFOG00015012810	polr2f	57	90.278	ENSTGUG00000016504	-	88	89.610	Taeniopygia_guttata
ENSSFOG00015012810	polr2f	80	91.089	ENSTGUG00000010476	POLR2F	93	90.551	Taeniopygia_guttata
ENSSFOG00015012810	polr2f	100	96.850	ENSTRUG00000021130	polr2f	71	96.850	Takifugu_rubripes
ENSSFOG00015012810	polr2f	100	97.638	ENSTNIG00000010827	polr2f	100	97.638	Tetraodon_nigroviridis
ENSSFOG00015012810	polr2f	79	88.000	ENSTTRG00000004817	POLR2F	64	88.000	Tursiops_truncatus
ENSSFOG00015012810	polr2f	100	89.764	ENSUAMG00000020504	POLR2F	100	89.764	Ursus_americanus
ENSSFOG00015012810	polr2f	100	89.764	ENSUMAG00000015052	POLR2F	100	89.764	Ursus_maritimus
ENSSFOG00015012810	polr2f	83	89.623	ENSVVUG00000024021	POLR2F	80	89.623	Vulpes_vulpes
ENSSFOG00015012810	polr2f	100	92.126	ENSXETG00000006346	polr2f	100	92.126	Xenopus_tropicalis
ENSSFOG00015012810	polr2f	100	96.063	ENSXCOG00000015983	polr2f	100	96.063	Xiphophorus_couchianus
ENSSFOG00015012810	polr2f	100	96.063	ENSXMAG00000001559	polr2f	100	96.063	Xiphophorus_maculatus