EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015012877 (Gene tree)
Gene ID: 108918990
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 18945 bases
Position: chrKV411262.1:878773-897717
Accession: 108918990
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015020078	CPSF_A	PF03178.15	3.3e-99	1	1
ENSSFOP00015020115	CPSF_A	PF03178.15	3e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015020345	-	3264	-	ENSSFOP00015020115	1087 (aa)	-	-
ENSSFOT00015020308	-	5373	XM_018726669	ENSSFOP00015020078	1217 (aa)	XP_018582185	A0A1W4Y195

Gene Model

Click here to download ENSSFOG00015012877's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015012877's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015012877	sf3b3	100	93.755	ENSG00000189091	SF3B3	100	96.774	Homo_sapiens
ENSSFOG00015012877	sf3b3	96	96.926	ENSAPOG00000006172	sf3b3	98	96.926	Acanthochromis_polyacanthus
ENSSFOG00015012877	sf3b3	100	93.607	ENSAMEG00000002187	SF3B3	100	93.607	Ailuropoda_melanoleuca
ENSSFOG00015012877	sf3b3	100	96.872	ENSACIG00000016487	sf3b3	100	96.872	Amphilophus_citrinellus
ENSSFOG00015012877	sf3b3	100	96.795	ENSAOCG00000007158	sf3b3	100	96.795	Amphiprion_ocellaris
ENSSFOG00015012877	sf3b3	100	96.795	ENSAPEG00000022786	sf3b3	100	96.795	Amphiprion_percula
ENSSFOG00015012877	sf3b3	100	97.042	ENSATEG00000013708	sf3b3	100	97.042	Anabas_testudineus
ENSSFOG00015012877	sf3b3	82	94.814	ENSAPLG00000004996	SF3B3	99	93.598	Anas_platyrhynchos
ENSSFOG00015012877	sf3b3	100	94.084	ENSACAG00000001817	SF3B3	100	94.084	Anolis_carolinensis
ENSSFOG00015012877	sf3b3	100	93.755	ENSANAG00000028001	SF3B3	100	93.755	Aotus_nancymaae
ENSSFOG00015012877	sf3b3	100	96.780	ENSACLG00000022555	sf3b3	100	96.780	Astatotilapia_calliptera
ENSSFOG00015012877	sf3b3	100	97.946	ENSAMXG00000003410	sf3b3	100	97.946	Astyanax_mexicanus
ENSSFOG00015012877	sf3b3	100	93.755	ENSBTAG00000010627	SF3B3	100	93.755	Bos_taurus
ENSSFOG00015012877	sf3b3	100	60.227	WBGene00019323	teg-4	100	60.227	Caenorhabditis_elegans
ENSSFOG00015012877	sf3b3	100	93.755	ENSCJAG00000014773	SF3B3	99	93.755	Callithrix_jacchus
ENSSFOG00015012877	sf3b3	100	93.837	ENSCAFG00000020151	SF3B3	100	93.837	Canis_familiaris
ENSSFOG00015012877	sf3b3	100	93.837	ENSCAFG00020020912	SF3B3	100	93.837	Canis_lupus_dingo
ENSSFOG00015012877	sf3b3	100	93.837	ENSCHIG00000019822	SF3B3	100	93.837	Capra_hircus
ENSSFOG00015012877	sf3b3	100	93.755	ENSTSYG00000007910	SF3B3	100	93.755	Carlito_syrichta
ENSSFOG00015012877	sf3b3	84	80.549	ENSCAPG00000001484	SF3B3	92	80.549	Cavia_aperea
ENSSFOG00015012877	sf3b3	100	92.440	ENSCPOG00000000586	SF3B3	100	92.440	Cavia_porcellus
ENSSFOG00015012877	sf3b3	100	93.755	ENSCCAG00000017736	SF3B3	100	93.755	Cebus_capucinus
ENSSFOG00015012877	sf3b3	100	93.755	ENSCATG00000036562	SF3B3	100	93.755	Cercocebus_atys
ENSSFOG00015012877	sf3b3	100	93.755	ENSCLAG00000003921	SF3B3	100	93.755	Chinchilla_lanigera
ENSSFOG00015012877	sf3b3	100	93.755	ENSCSAG00000004371	SF3B3	100	93.755	Chlorocebus_sabaeus
ENSSFOG00015012877	sf3b3	90	89.720	ENSCHOG00000001878	SF3B3	90	89.720	Choloepus_hoffmanni
ENSSFOG00015012877	sf3b3	100	93.591	ENSCPBG00000015853	SF3B3	100	93.591	Chrysemys_picta_bellii
ENSSFOG00015012877	sf3b3	100	79.967	ENSCING00000001342	-	100	79.967	Ciona_intestinalis
ENSSFOG00015012877	sf3b3	99	78.818	ENSCSAVG00000011454	-	100	78.818	Ciona_savignyi
ENSSFOG00015012877	sf3b3	100	90.222	ENSCANG00000042920	SF3B3	100	90.715	Colobus_angolensis_palliatus
ENSSFOG00015012877	sf3b3	100	93.673	ENSCGRG00001015908	Sf3b3	100	93.673	Cricetulus_griseus_chok1gshd
ENSSFOG00015012877	sf3b3	100	93.673	ENSCGRG00000010180	Sf3b3	100	93.673	Cricetulus_griseus_crigri
ENSSFOG00015012877	sf3b3	83	95.359	ENSCSEG00000014192	sf3b3	99	95.409	Cynoglossus_semilaevis
ENSSFOG00015012877	sf3b3	100	96.631	ENSCVAG00000010459	sf3b3	100	96.631	Cyprinodon_variegatus
ENSSFOG00015012877	sf3b3	100	96.960	ENSDARG00000103553	sf3b3	100	96.960	Danio_rerio
ENSSFOG00015012877	sf3b3	92	90.550	ENSDNOG00000043626	SF3B3	100	93.539	Dasypus_novemcinctus
ENSSFOG00015012877	sf3b3	100	93.755	ENSDORG00000014176	Sf3b3	100	93.755	Dipodomys_ordii
ENSSFOG00015012877	sf3b3	100	75.143	FBgn0035162	Sf3b3	100	75.143	Drosophila_melanogaster
ENSSFOG00015012877	sf3b3	84	95.781	ENSETEG00000002729	SF3B3	84	95.781	Echinops_telfairi
ENSSFOG00015012877	sf3b3	100	86.935	ENSEBUG00000006117	sf3b3	100	86.935	Eptatretus_burgeri
ENSSFOG00015012877	sf3b3	100	93.837	ENSEASG00005013376	SF3B3	100	93.837	Equus_asinus_asinus
ENSSFOG00015012877	sf3b3	100	93.837	ENSECAG00000014053	SF3B3	100	93.837	Equus_caballus
ENSSFOG00015012877	sf3b3	93	93.333	ENSEEUG00000015611	SF3B3	93	93.333	Erinaceus_europaeus
ENSSFOG00015012877	sf3b3	100	96.148	ENSELUG00000015417	sf3b3	100	96.148	Esox_lucius
ENSSFOG00015012877	sf3b3	100	93.837	ENSFCAG00000009487	SF3B3	100	93.837	Felis_catus
ENSSFOG00015012877	sf3b3	100	93.344	ENSFALG00000007372	SF3B3	100	93.344	Ficedula_albicollis
ENSSFOG00015012877	sf3b3	100	93.755	ENSFDAG00000002608	SF3B3	100	93.755	Fukomys_damarensis
ENSSFOG00015012877	sf3b3	100	97.042	ENSFHEG00000017824	sf3b3	100	97.042	Fundulus_heteroclitus
ENSSFOG00015012877	sf3b3	100	93.103	ENSGMOG00000008139	sf3b3	100	93.103	Gadus_morhua
ENSSFOG00015012877	sf3b3	100	93.591	ENSGALG00000002531	SF3B3	100	93.591	Gallus_gallus
ENSSFOG00015012877	sf3b3	100	96.878	ENSGAFG00000015206	sf3b3	100	96.878	Gambusia_affinis
ENSSFOG00015012877	sf3b3	100	96.880	ENSGACG00000002646	sf3b3	100	96.880	Gasterosteus_aculeatus
ENSSFOG00015012877	sf3b3	96	93.595	ENSGAGG00000006746	SF3B3	97	93.595	Gopherus_agassizii
ENSSFOG00015012877	sf3b3	100	93.755	ENSGGOG00000003246	SF3B3	100	93.755	Gorilla_gorilla
ENSSFOG00015012877	sf3b3	100	92.732	ENSHBUG00000005960	sf3b3	100	92.732	Haplochromis_burtoni
ENSSFOG00015012877	sf3b3	100	93.755	ENSHGLG00000010135	SF3B3	100	93.755	Heterocephalus_glaber_female
ENSSFOG00015012877	sf3b3	100	91.646	ENSHGLG00100011148	SF3B3	100	91.646	Heterocephalus_glaber_male
ENSSFOG00015012877	sf3b3	100	96.631	ENSHCOG00000011981	sf3b3	100	96.631	Hippocampus_comes
ENSSFOG00015012877	sf3b3	100	97.946	ENSIPUG00000020435	sf3b3	100	97.946	Ictalurus_punctatus
ENSSFOG00015012877	sf3b3	100	93.755	ENSSTOG00000007065	SF3B3	100	93.755	Ictidomys_tridecemlineatus
ENSSFOG00015012877	sf3b3	100	93.755	ENSJJAG00000003948	Sf3b3	100	93.755	Jaculus_jaculus
ENSSFOG00015012877	sf3b3	100	94.906	ENSKMAG00000004066	sf3b3	99	97.011	Kryptolebias_marmoratus
ENSSFOG00015012877	sf3b3	100	96.795	ENSLBEG00000018302	sf3b3	100	96.795	Labrus_bergylta
ENSSFOG00015012877	sf3b3	98	90.947	ENSLACG00000012501	SF3B3	99	90.947	Latimeria_chalumnae
ENSSFOG00015012877	sf3b3	100	97.701	ENSLOCG00000007566	sf3b3	100	97.701	Lepisosteus_oculatus
ENSSFOG00015012877	sf3b3	100	93.837	ENSLAFG00000012219	SF3B3	100	93.837	Loxodonta_africana
ENSSFOG00015012877	sf3b3	100	93.755	ENSMFAG00000045487	SF3B3	100	93.755	Macaca_fascicularis
ENSSFOG00015012877	sf3b3	100	93.755	ENSMMUG00000017812	SF3B3	100	93.755	Macaca_mulatta
ENSSFOG00015012877	sf3b3	100	93.755	ENSMNEG00000033385	SF3B3	100	93.755	Macaca_nemestrina
ENSSFOG00015012877	sf3b3	100	90.222	ENSMLEG00000043891	SF3B3	100	90.222	Mandrillus_leucophaeus
ENSSFOG00015012877	sf3b3	100	97.453	ENSMAMG00000016837	sf3b3	100	97.453	Mastacembelus_armatus
ENSSFOG00015012877	sf3b3	100	96.960	ENSMZEG00005010836	sf3b3	100	96.960	Maylandia_zebra
ENSSFOG00015012877	sf3b3	96	96.851	ENSMZEG00005026015	sf3b3	99	96.851	Maylandia_zebra
ENSSFOG00015012877	sf3b3	100	93.591	ENSMGAG00000001597	SF3B3	100	93.591	Meleagris_gallopavo
ENSSFOG00015012877	sf3b3	81	76.529	ENSMAUG00000013618	Sf3b3	95	77.278	Mesocricetus_auratus
ENSSFOG00015012877	sf3b3	100	92.781	ENSMICG00000001363	SF3B3	100	92.781	Microcebus_murinus
ENSSFOG00015012877	sf3b3	100	93.673	ENSMOCG00000006108	Sf3b3	100	93.673	Microtus_ochrogaster
ENSSFOG00015012877	sf3b3	96	97.042	ENSMMOG00000002598	sf3b3	97	97.042	Mola_mola
ENSSFOG00015012877	sf3b3	100	89.737	ENSMODG00000014363	SF3B3	100	89.737	Monodelphis_domestica
ENSSFOG00015012877	sf3b3	100	96.795	ENSMALG00000008014	sf3b3	100	96.795	Monopterus_albus
ENSSFOG00015012877	sf3b3	100	93.673	MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.673	Mus_caroli
ENSSFOG00015012877	sf3b3	100	93.673	ENSMUSG00000033732	Sf3b3	100	93.673	Mus_musculus
ENSSFOG00015012877	sf3b3	100	93.591	MGP_SPRETEiJ_G0032681	Sf3b3	100	93.591	Mus_spretus
ENSSFOG00015012877	sf3b3	100	93.837	ENSMPUG00000010277	SF3B3	100	93.837	Mustela_putorius_furo
ENSSFOG00015012877	sf3b3	100	93.755	ENSMLUG00000014607	SF3B3	100	93.755	Myotis_lucifugus
ENSSFOG00015012877	sf3b3	100	93.755	ENSNGAG00000021903	Sf3b3	100	93.755	Nannospalax_galili
ENSSFOG00015012877	sf3b3	90	91.667	ENSNBRG00000007197	sf3b3	99	91.667	Neolamprologus_brichardi
ENSSFOG00015012877	sf3b3	100	92.282	ENSNLEG00000016127	SF3B3	100	92.282	Nomascus_leucogenys
ENSSFOG00015012877	sf3b3	92	89.678	ENSMEUG00000004479	SF3B3	94	89.678	Notamacropus_eugenii
ENSSFOG00015012877	sf3b3	98	90.528	ENSOPRG00000009847	SF3B3	100	90.528	Ochotona_princeps
ENSSFOG00015012877	sf3b3	100	93.755	ENSODEG00000014154	SF3B3	100	93.755	Octodon_degus
ENSSFOG00015012877	sf3b3	100	97.042	ENSONIG00000011198	sf3b3	100	97.042	Oreochromis_niloticus
ENSSFOG00015012877	sf3b3	100	93.919	ENSOANG00000001161	-	100	93.919	Ornithorhynchus_anatinus
ENSSFOG00015012877	sf3b3	100	91.783	ENSOCUG00000004139	SF3B3	100	91.783	Oryctolagus_cuniculus
ENSSFOG00015012877	sf3b3	100	96.964	ENSORLG00000013472	sf3b3	100	96.964	Oryzias_latipes
ENSSFOG00015012877	sf3b3	100	96.964	ENSORLG00020017473	sf3b3	100	96.964	Oryzias_latipes_hni
ENSSFOG00015012877	sf3b3	100	96.964	ENSORLG00015007710	sf3b3	100	96.964	Oryzias_latipes_hsok
ENSSFOG00015012877	sf3b3	100	96.631	ENSOMEG00000014483	sf3b3	100	96.631	Oryzias_melastigma
ENSSFOG00015012877	sf3b3	100	93.525	ENSOGAG00000016051	SF3B3	100	93.525	Otolemur_garnettii
ENSSFOG00015012877	sf3b3	100	93.607	ENSOARG00000004816	SF3B3	100	93.607	Ovis_aries
ENSSFOG00015012877	sf3b3	100	93.755	ENSPPAG00000026807	SF3B3	100	93.755	Pan_paniscus
ENSSFOG00015012877	sf3b3	100	93.837	ENSPPRG00000001686	SF3B3	100	93.837	Panthera_pardus
ENSSFOG00015012877	sf3b3	97	93.833	ENSPTIG00000020382	SF3B3	100	93.833	Panthera_tigris_altaica
ENSSFOG00015012877	sf3b3	100	93.755	ENSPTRG00000008308	SF3B3	100	93.755	Pan_troglodytes
ENSSFOG00015012877	sf3b3	100	93.755	ENSPANG00000024075	SF3B3	100	93.755	Papio_anubis
ENSSFOG00015012877	sf3b3	100	97.946	ENSPKIG00000002712	sf3b3	100	97.946	Paramormyrops_kingsleyae
ENSSFOG00015012877	sf3b3	97	90.800	ENSPSIG00000002232	SF3B3	100	93.652	Pelodiscus_sinensis
ENSSFOG00015012877	sf3b3	100	93.673	ENSPEMG00000008603	Sf3b3	100	93.673	Peromyscus_maniculatus_bairdii
ENSSFOG00015012877	sf3b3	100	91.208	ENSPMAG00000001793	sf3b3	100	91.208	Petromyzon_marinus
ENSSFOG00015012877	sf3b3	100	93.919	ENSPCIG00000014927	SF3B3	100	93.919	Phascolarctos_cinereus
ENSSFOG00015012877	sf3b3	100	96.878	ENSPFOG00000015516	sf3b3	100	96.878	Poecilia_formosa
ENSSFOG00015012877	sf3b3	100	96.878	ENSPLAG00000014330	sf3b3	100	96.878	Poecilia_latipinna
ENSSFOG00015012877	sf3b3	100	96.960	ENSPMEG00000019856	sf3b3	100	96.960	Poecilia_mexicana
ENSSFOG00015012877	sf3b3	82	97.065	ENSPREG00000019669	sf3b3	97	96.951	Poecilia_reticulata
ENSSFOG00015012877	sf3b3	95	93.574	ENSPPYG00000007539	SF3B3	100	93.574	Pongo_abelii
ENSSFOG00015012877	sf3b3	100	73.213	ENSPCAG00000002623	SF3B3	100	73.213	Procavia_capensis
ENSSFOG00015012877	sf3b3	84	98.131	ENSPCOG00000026582	SF3B3	100	98.131	Propithecus_coquereli
ENSSFOG00015012877	sf3b3	100	93.755	ENSPVAG00000000684	SF3B3	100	93.755	Pteropus_vampyrus
ENSSFOG00015012877	sf3b3	100	97.042	ENSPNYG00000003528	sf3b3	100	97.042	Pundamilia_nyererei
ENSSFOG00015012877	sf3b3	100	98.357	ENSPNAG00000015419	sf3b3	100	98.357	Pygocentrus_nattereri
ENSSFOG00015012877	sf3b3	100	93.673	ENSRNOG00000017724	Sf3b3	100	93.673	Rattus_norvegicus
ENSSFOG00015012877	sf3b3	100	93.755	ENSRBIG00000021904	SF3B3	100	93.755	Rhinopithecus_bieti
ENSSFOG00015012877	sf3b3	100	93.755	ENSRROG00000045703	SF3B3	100	93.755	Rhinopithecus_roxellana
ENSSFOG00015012877	sf3b3	82	41.935	YML049C	-	75	41.935	Saccharomyces_cerevisiae
ENSSFOG00015012877	sf3b3	100	93.755	ENSSBOG00000029156	SF3B3	100	93.755	Saimiri_boliviensis_boliviensis
ENSSFOG00015012877	sf3b3	100	93.919	ENSSHAG00000000372	SF3B3	100	93.919	Sarcophilus_harrisii
ENSSFOG00015012877	sf3b3	100	96.220	ENSSMAG00000014386	sf3b3	100	96.220	Scophthalmus_maximus
ENSSFOG00015012877	sf3b3	100	97.288	ENSSDUG00000021201	sf3b3	100	97.288	Seriola_dumerili
ENSSFOG00015012877	sf3b3	100	97.206	ENSSLDG00000017532	sf3b3	100	97.206	Seriola_lalandi_dorsalis
ENSSFOG00015012877	sf3b3	93	95.652	ENSSARG00000006917	SF3B3	93	95.652	Sorex_araneus
ENSSFOG00015012877	sf3b3	100	93.837	ENSSPUG00000006253	SF3B3	100	93.837	Sphenodon_punctatus
ENSSFOG00015012877	sf3b3	100	89.400	ENSSPAG00000003125	sf3b3	100	89.400	Stegastes_partitus
ENSSFOG00015012877	sf3b3	100	93.837	ENSSSCG00000025323	SF3B3	100	93.837	Sus_scrofa
ENSSFOG00015012877	sf3b3	100	93.514	ENSTGUG00000006082	SF3B3	100	93.514	Taeniopygia_guttata
ENSSFOG00015012877	sf3b3	61	80.425	ENSTRUG00000015623	sf3b3	96	80.425	Takifugu_rubripes
ENSSFOG00015012877	sf3b3	89	96.967	ENSTNIG00000004857	sf3b3	100	96.967	Tetraodon_nigroviridis
ENSSFOG00015012877	sf3b3	93	79.665	ENSTBEG00000002946	SF3B3	100	79.665	Tupaia_belangeri
ENSSFOG00015012877	sf3b3	100	93.016	ENSTTRG00000005855	SF3B3	100	93.016	Tursiops_truncatus
ENSSFOG00015012877	sf3b3	100	93.837	ENSUAMG00000006780	SF3B3	100	93.837	Ursus_americanus
ENSSFOG00015012877	sf3b3	100	93.837	ENSUMAG00000017757	SF3B3	100	93.837	Ursus_maritimus
ENSSFOG00015012877	sf3b3	100	78.800	ENSVPAG00000003202	SF3B3	100	78.800	Vicugna_pacos
ENSSFOG00015012877	sf3b3	100	93.919	ENSVVUG00000017922	SF3B3	100	93.919	Vulpes_vulpes
ENSSFOG00015012877	sf3b3	100	93.591	ENSXETG00000032869	SF3B3	100	93.591	Xenopus_tropicalis
ENSSFOG00015012877	sf3b3	78	97.393	ENSXCOG00000013628	sf3b3	97	97.346	Xiphophorus_couchianus
ENSSFOG00015012877	sf3b3	100	96.878	ENSXMAG00000006334	sf3b3	100	96.878	Xiphophorus_maculatus